Lipotes vexillifer (Yangtze River dolphin): 103078162
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Entry
103078162 CDS
T03090
Symbol
PCDH15
Name
(RefSeq) protocadherin-15
KO
K16500
protocadherin-15
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lve03037
]
103078162 (PCDH15)
04515 Cell adhesion molecules [BR:
lve04515
]
103078162 (PCDH15)
Cilium and associated proteins [BR:
lve03037
]
Primary cilia and associated proteins
USH complex and associated proteins
103078162 (PCDH15)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103078162 (PCDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CshA_repeat
Motif
Other DBs
NCBI-GeneID:
103078162
NCBI-ProteinID:
XP_007470377
UniProt:
A0A340YD59
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
TPEDYPRFFHMHPRTAELSLLEPVNRDFHQKFDLVIKAEQDNGHPLPAFASLHIEILDVN
NQSPYFTMPSYQGYILESAPVGATISDSVNLTTPLRIVVLDKDVEDVPPGGVPTKDPELH
LFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYIFSITAFDGVQESEPVTVNIRVMDA
NDNTPTFPEISYDVYVYTDMNPGDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTT
GLITIAPGVELIVGRTYALTIQAADNAPPAERRHSICTVYIEVLPPNNQSPPRFPQLMYS
LEISEAMRVGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGKALDRESTD
RYILIVTANDGRPDGTSTATVNVVVTDVNDNAPVFDPYLLRNLSVVEEEANAFVGQVWAT
DADAGINGQVHYSLGNFNNLFRITSNGSIYTRVKLNREVRDYYELVVVATDGAVHPRHST
LTLAIRVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQVEAKDVDLGANVSYRIRSPEVK
HIFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDY
PPVFSKRIYKGIVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDVQFPYPASIFDVE
EDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKILVLHPGEIPRFTQEEYRP
PPVSELATRGTMVGVISAAAINQSIVYSIVAGNEEDKFGINNITGVIYVNAPLDYETRTS
YVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDHPPVFQKKFYIGGVSEDARMFAS
VLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQV
IATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVERKIEDLTEILDRYVQEQIPGA
KVVVENVGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAIDRNELFKFLDGKLLDINKDFQ
PYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLALAFIIILCCIPAILVVLVSYRQF
KVRQAECTKTARIQSALPAAKPAAPAPAPVAAPPPPPPPPPPPGAHLYEEVGDSTMHKYE
MPQYGSRRRLLPPTGQEEYGEVVGEAEEEYEEEEEKAKKVKPKVEIREPSEEEVVVTIEK
PPAAEPTYTTWKRARIFPMIFKKVRGLADRRGIIDLEDEEWQRRLEAEDKDYLKLTLDQE
EATESTVESEEESSSDYTEYSEEESEFSESETTEESETETPSEEEESSTPESEESESTES
EGEKARKNIFLARRRPIAEEVQKVKDRKEELPEEPEERNVEEEEERPAEEQESELAPVEE
PMDLESQDITEEGSAESASVEGGVESEEESESGMSSSSSESQSGGPWGFQVPEYDPSKQA
NQKKPPGASSEGYNTAL
NT seq
4376 nt
NT seq
+upstream
nt +downstream
nt
ggactcctgaggattacccacgattttttcatatgcatccaaggactgcagaacttagtc
tcctggagccagtaaatagagactttcaccagaagtttgatttggttattaaggctgaac
aggacaatggtcatcctcttcctgcttttgccagtctgcatattgaaatactggatgtaa
acaatcagagcccatatttcacaatgcccagttatcaaggctatattctggaatctgccc
cagtgggagcaactatttctgacagtgtgaatttgaccacccctctaagaattgtagttc
tggacaaggatgtagaagatgttccacctggtggagttcctacgaaagacccagagcttc
acctttttctgaatgattacacttcagtcttcactgtcacgcagactggaatcactcgct
acctcaccttacttcaaccagtggacagggaagaacagcaaacttacatcttttcgataa
cggcatttgatggtgttcaagaaagtgagccagttactgtcaatattcgggtgatggatg
caaacgataacactccaaccttccctgaaatatcctatgatgtctatgtttatacagata
tgaaccctggggacagtgtcatacagctcactgcagtcgacgcagacgaagggtcaaacg
gggagatcacatatgaaatactggttggggctcagggagacttcatcatcaataaaacaa
cagggcttatcaccatcgctccaggggtggaattgatagttgggcggacttatgcactta
ccatccaagcagcggataatgctcctccagcagagagaaggcactccatctgcactgtgt
acattgaagtgcttcctccaaataatcaaagccctcctcgcttcccgcagctgatgtata
gccttgaaatcagtgaggccatgagggtcggcgctgttttattaaatctacaggcaactg
atcgagagggagatccaataacatatgccattgagaatggagatccacagcgagttttta
atctttcagaaactactgggattctaaccttagggaaagcactggacagggaaagcactg
atcgctacattctgatcgtcactgctaatgatggcaggccagatgggacctcaactgcca
cggtaaatgtggtggtgacagatgtcaatgacaatgctccagtgtttgatccctatctgc
tcagaaatctgtcagtggtggaagaagaagccaatgcgtttgtgggtcaagtatgggcaa
cagacgctgatgctggaataaatggccaagtacactacagtttgggtaacttcaataatc
tttttcgtatcacatccaatgggagtatttacacaagagtgaagcttaacagagaagtca
gggactactatgaacttgttgttgtggcaactgatggagcggtacaccctcgtcattcaa
ctctaacactggccatcagggttttggatattgatgataatagtcctgtgttcaccaatt
caacatatactgttgtcgttgaagagaatctgccagccgggaccagtttccttcaagtag
aggccaaagatgttgaccttggagctaatgtatcttatcggataagaagtccagaagtga
agcacatttttgcactacatccatttacaggagaactctcccttttaaggagtttggact
atgaggcatttccagaccaggaagcaagtatcacttttctagtggaggcctttgatattt
atggaacaatgccacctggtattgctactgtcacagtgatagtaaaggatatgaatgatt
atcctccagtatttagtaaacggatctacaaagggatagtggctccagatgccgtcaagg
gtacacctatcacaaccgtttatgctgaagatgcagaccctcctggattacctgcaagtc
gtgtgagatatagagtagatgatgtccagtttccttatcctgccagtatttttgatgtag
aagaagattctggaagagtaataactcgagttaatcttaatgaagaacctacaacaattt
ttaagttggtggttgttgcttttgatgatggtgagcctgtgatgtccagcagtgccactg
tgaaaattcttgtcttacatcctggagaaatcccacgcttcacacaagaggaatacagac
cgcctccagtaagtgaacttgcaaccagagggactatggttggtgtaatttctgctgcag
ccatcaatcagagtattgtgtactccattgttgcaggaaatgaagaggataagtttggaa
ttaataacatcacgggtgtaatctatgtgaatgcccctctggattatgagacaaggacaa
gctatgtacttcgagtccaagctgattccctggaagtagtccttgccaacctacgtgttc
cttcaaaaagcaatacagctaaagtgtatattgagattcaggatgaaaatgatcatcccc
cagtgtttcagaaaaaattctacattggaggtgtatctgaagatgcaagaatgtttgctt
ctgtgctcagagttaaggctactgataaagataccggcaattatagtgccatggcataca
gactcataataccaccaattaaagagggaaaagaaggattcgtggtggaaacatacacag
gacttatcaaaacggctatgttgttccataatatgaggaggtcttacttcaagtttcaag
tcattgcaactgacgactatgggaagggcctaagtggcaaagcagatgttcttgtctctg
tggtcaatcagctggatatgcaagtcattgtttctaatgtaccccctactctagtggaaa
gaaagatagaagatcttacagagattttggatcgctatgttcaggagcaaattcctggtg
ccaaggttgtggtagagaacgttggagctcgccggcatggcgatgccttttctctagaag
attacacaaagtgtgacttgactgtctatgcaatcgacccccaaaccaacagagccatcg
acagaaatgagctttttaaatttttagatggcaaacttctcgatatcaataaagactttc
agccgtattacggggaaggaggacgcattctggagatccggactccagaggcagtaacca
gcattaagaagcgaggagaaagtctaggctacacagaaggggccttgctggctctggcct
tcatcatcatcctctgctgtattcctgccatcttggtggttttggtcagctacagacagt
ttaaagtgcgccaagctgagtgcaccaagacagcccgaatacaatccgccctacctgcag
cgaaacccgcagcacctgcccctgcaccagtggccgcgcccccaccgcccccgccacccc
cgccgcctccaggggcgcatctctatgaagaagtgggggacagcacgatgcataagtatg
aaatgcctcaatatggaagtcgccgtcgtttgttaccaccaactggacaagaggaatatg
gtgaggtggttggcgaagctgaggaggaatatgaggaggaggaggaaaaggcaaagaaag
ttaaaccaaaagttgaaattagagagcctagtgaggaggaagtagttgtcactattgaaa
agccaccagcagctgagccaacatatacgacgtggaagagagccaggatattccccatga
tttttaagaaagttagaggactagctgatagaagaggcatcattgaccttgaagatgaag
agtggcagagacgccttgaggcagaagataaagattatttgaaactaacactggaccaag
aggaagctacagaaagcacggtagagtcagaggaggaatcctcaagcgactatactgaat
acagtgaagaggaatccgagttcagcgagtctgagacgacagaagagtctgagacagaga
caccctctgaggaggaagaaagttctacccctgaatcagaagaatcggaatccacggagt
cagaaggagaaaaggcaaggaagaacatttttcttgcaagaagaaggcccattgctgaag
aggtccagaaagtcaaagatagaaaagaggagctacctgaagagccagaagaacggaacg
tggaagaagaggaggaacgcccagcagaagaacaggaaagtgagctggcccctgtggaag
agcccatggacctcgaatctcaagacatcactgaggagggcagtgcagaatcagcttcag
tggaaggaggtgtggaaagtgaggaggagtcagaatcgggtatgagtagcagtagtagtg
aaagtcagtctggaggtccctggggctttcaggtgccagagtatgacccaagcaagcagg
caaaccaaaagaagcctccaggagcaagctcagaaggttacaacacagcactttaa
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integrated database retrieval system
