Lipotes vexillifer (Yangtze River dolphin): 103085772
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Entry
103085772 CDS
T03090
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve04714
Thermogenesis
lve05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103085772 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103085772 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103085772 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103085772 (ARID1B)
03021 Transcription machinery [BR:
lve03021
]
103085772 (ARID1B)
03036 Chromosome and associated proteins [BR:
lve03036
]
103085772 (ARID1B)
Transcription factors [BR:
lve03000
]
Eukaryotic type
Helix-turn-helix
ARID
103085772 (ARID1B)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103085772 (ARID1B)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103085772 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103085772
NCBI-ProteinID:
XP_007451418
UniProt:
A0A340WPH5
LinkDB
All DBs
Position
Unknown
AA seq
2101 aa
AA seq
DB search
MAHNASAAAAAASANSAKSGGSEAALKEGGSAAALSSSSSSSSAAASSSSSAGPGSAMET
GLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHLHHHAHHLHRHHHALQQQLSQFQQQQQQR
QQHPISNNSLSGAGSGTAQPGPDMEQPQHGGAKDSAGGSQADPPGQPLLSKPGDEDDAPP
KMGEPAGGRYEQPGLGAQQQPVAVPGGGGGVGGGGGVGGGGVGGPAAVSEFNNYYGSAAP
ASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPNSMDPLQNSHEGYPNSQYNHYPG
YSRPSAGGGGGGGGGGGGGGGGSGGGRAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAW
AAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPAGSY
GPPGPQRYPIGIQGRTPGAMGGMQYPQQQVPPQYGQPGVSGYCQQGQQPYYSQQPQAQYL
PSQPQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPT
GTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR
SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAATQRNPQMSQYGPQQT
GPSMSPHPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGP
GPGMGINANSQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGHMSSMTPSSPGMSQQGGPG
MGPPMPTVNRKAQEAAAAVMQAAANSAQSSQPCGAMPLGRMPSAGMQNRPFPGHMSSMTP
SSPGMSQQGGPGMGPPMPTVNPSMGLADMMSPGESKLPLPLKADGKEEGSAQPESKSKKS
SSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCV
KEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKTERGEEPPPEVF
STGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQITPMQ
GGRSSTVSVHDPFSDASDSSFPKRNSMTPSTPYQQGMSMPEVMGRMPYEPNKDPFGGMRK
VPGSSEPFMTQGQMPTSSMQDMYNQSPSGAMSSLGMGQRQQFPYGASYDRRHEPYGQQYP
GQGPPSGQPAYGGHQPGLYPQQTNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQY
GSSYSGPDRRPIQGQYPYPYTRERMQGPGQIQAHGIPPQMMGGPMQSSSSEGPQQSMWAT
RNDMPYPYQSRQGPGGPAQTPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSA
SMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRSLESRMSPSKSPFLPSMKMQKVMPTV
PTAQVTGPAPQPPPVRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPS
QKALDHNVVKRDDSQSLADDSGKEEDAECIDEEEDEEEDEEEDGGKAETEDRSSTALASP
DATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGGDTTE
HIQTHFESKMEIPPRRRPPPPLSATGRKKEQEGKGDPEEQQEKSIIATIDDVLSARPGAL
PEDANPGTQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDEAPLCTVAHWQDSLAKRCICV
SNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS
KDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFP
TVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCR
EMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLE
PPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQ
L
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atggcccataacgcgagcgcggcggccgccgccgccagcgctaacagcgccaagagcggc
ggctccgaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctcc
tcctcctccgcggcggcgtcctcttcctcctcggcgggcccgggctcggccatggagacg
gggctgctccccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccccac
cagcagcaccaccaccaccatcatgcccaccacctgcaccaccatgcccaccacctccac
cgccaccaccacgcactacaacagcagctaagccagttccagcagcagcagcagcagcgg
cagcagcatcccatttccaacaacagtctcagcggcgcgggcagtggcacggctcagccc
ggtcccgacatggagcagccgcaacatggaggggccaaggacagtgccgggggcagccag
gccgaccccccgggccagcctctgctgagcaagccgggcgacgaggacgacgcgccgccc
aagatgggggagccggcgggcggccgctacgagcagccgggcctgggcgcgcagcagcag
ccggtcgccgtgcccgggggcggcggcggcgtcggtggcggcggcggcgtcggcggcggc
ggcgtcggcggcccggcggccgtctcggagtttaataattactatggcagcgctgcccca
gctagcggcggccccggcggccgcgctgggccttgctttgatcaacatggcggacaacaa
agccccgggatggggatgatgcactccgcctcagctgccgccggagcccccaacagcatg
gaccccctgcagaactcccacgaagggtaccccaacagccagtacaaccattatccgggc
tacagccggcccagcgcgggcggcggcggcggcggcggcggcggcggaggaggaggagga
ggaggcagcggaggaggcagggcggcggcgggggcggcggcgggcggccagcaggcggcc
gcgggcatgggcttgggcaaggacatgggcgcccagtacgccgctgccagcccggcctgg
gcggccgcgcaacaaaggagccacccggcgatgagccccggcacccccggcccgaccatg
ggcagatcccagggcagcccaatggatcccatggtgatgaagagacctcagctgtatggg
atgggcagtaaccctcattctcagccacagcagagcagcccttacccggcaggttcctac
ggccccccaggcccacagcggtatccaattggcattcaaggtcggaccccaggggccatg
ggaggaatgcagtacccacagcagcaggtgccgcctcagtatggccagccaggtgtgagc
ggttactgccagcagggccagcagccttactacagccagcagccgcaggcgcagtatctg
ccgtcccagccccagcagaggtaccagccgcagcaggatatgtctcaggaaggctatgga
actaggtctcaacctcctctggctcctggaaaacccaaccatgaagacttgaacttaata
caacaagaaagaccatcaagtttaccagacctgtctggctccattgatgacctccccaca
ggaacggaagcaactttgagctcagcagtcagtgcatccgggtccacgagcagccaaggg
gatcagagcaacccagctcagtcgcctttctctccacacgcatctccccatctctccagc
atccctgggggcccatcaccttctcctgtcggctctcctgtaggaagcaaccagtcacga
tctggcccaatttctcctgcaagtattccaggcagtcagatgcctcctcagccacctggg
agccagtcggaatccagttctcatcctgccttgagccagtcaccaatgccacaggaaaga
ggttttatggcagccacacaaagaaaccctcagatgtctcaatatggaccccaacagaca
ggaccatccatgtcgcctcatccttctcctggaggccagatgcatcctgggatcagtagc
tttcagcagagtaactcaagtgggacttacggtccacagatgagccagtatggaccacaa
ggtaactactccagacccccaacatatagtggagtgcccagtgcaagctacagcggccca
gggcccggcatgggcatcaatgccaacagccagatgcatggacaagggccaagccagccg
tgtggtgctatgcccctgggacgaatgccatcagctgggatgcagaacagaccctttcct
ggacatatgagcagcatgacccctagttctcctggcatgtctcagcagggagggccagga
atggggccaccaatgccaaccgtgaaccgtaaggcacaggaggcagctgccgcagtgatg
caggccgctgcgaactcggcacaaagcagccagccgtgtggtgctatgcccctgggacga
atgccatcagctgggatgcagaacagaccctttcctggacatatgagcagcatgacccct
agttctcctggcatgtctcagcagggagggccaggaatggggccaccaatgccaaccgtg
aacccatctatgggtcttgcagatatgatgtctcctggtgaatccaaactgcccctgcct
ctcaaagcagatggtaaagaagaaggctctgcacagccggagagcaagtcgaagaagtcc
agctcatccaccaccacgggggaaaagatcacaaaggtgtatgaattggggaatgagcca
gagagaaagctgtgggtagaccgatacctcaccttcatggaggagagaggctccccggtc
tcaagtctgcctgcggtgggcaagaagcccttggacctgttccgactctacgtctgcgtt
aaagagattggaggtttggcacaggttaataaaaacaagaagtggcgtgagctggcaacc
aacctaaatgttggcacttcaagcagtgcagcgagctccctgaaaaagcagtatattcag
tacctgtttgcctttgagtgcaagactgagcgaggggaggagcccccgccggaagtcttc
agcacgggagacaccaagaagcagcccaaactccagccgccctctcctgctaactcagga
tccttgcaaggtccacagactccccagtcaactggcagtaattccatggcagaggttcca
ggtgacctgaaaccgcctactccggcctccacccctcatggacagattaccccaatgcaa
ggtggaagaagcagtacagtcagtgtgcacgacccattctcagatgcaagtgattcatca
ttcccaaaacgcaactccatgactccgagcaccccgtaccagcagggcatgagcatgcca
gaagtgatgggcaggatgccctacgagcccaacaaggacccctttggaggaatgagaaaa
gtgcctggaagtagtgagccgtttatgacgcaaggacagatgcccaccagcagcatgcag
gacatgtataaccagagtccgtctggagcgatgtccagtctaggcatggggcagcggcag
cagtttccctatggagccagttacgatcgaaggcatgaaccttacgggcagcagtaccca
ggccaaggccctccctcaggacagccagcatatggaggacaccagccgggcctgtatccg
cagcagacgaattataagcgccatatggatggcatgtatgggcctccagccaaacgccac
gagggagacatgtacaacatgcagtacggcaaccagcagcaagagatgtataaccagtac
ggaagttcctactccggacccgacaggaggcccatccagggacagtacccgtacccctac
accagagagaggatgcaaggcccggggcagatacaggcgcacgggatcccgcctcagatg
atgggcggcccaatgcagtcgtcctccagcgaagggcctcagcagagtatgtgggcgaca
cgcaacgatatgccttatccctaccagagcaggcaaggccccggcggccctgcacagaca
cctccttacccaggcatgaaccgcacggacgacatgatggtacctgatcaaaggataaac
cacgagagccagtggccttctcacgtcagccagcgtcagccttacatgtcctcttcagcc
tccatgcagcccatcacgcgcccgcctcagtcatcctaccagacgccaccgtcgctgcca
aatcacatctccagggcgcccagccccgcctccttccagcgctccctggagagccgcatg
tctcccagcaagtcccccttccttccctccatgaagatgcagaaggtcatgcccaccgtc
cccacggcccaggtcacggggccggccccccagccgcccccagtcagaagggagattacc
tttcctcctggctctgtggaagcatcacagcccgtcttgaaacaaaggcggaagattacc
tcaaaagacattgttactcctgaggcctggcgtgtgatgatgtcccttaagtcaggtctt
ctggctgaaagtacttgggctttggacactattaatattcttctatatgatgacagcact
gtcgctacgttcaatctctcccagttgtccggatttctcgaacttttagtagagtacttt
aggaaatgcctgattgacatttttgggattcttatggaatatgaagtgggagaccccagc
caaaaagcacttgatcacaatgtggtaaagagagatgacagccagtccttggccgacgat
tctgggaaagaggaagatgccgaatgtattgatgaggaggaagacgaggaggaagacgag
gaggaagacggtgggaaggcggagactgaggacaggagcagcacggctttggcctccccc
gatgccaccgcggatccaaaggagaagcccaggcaagccagtaagttcgacaagctgcca
ataaagatagtcaagaagaacaacctgtttgttgtcgaccggtctgacaagctgggccgt
gttcaggagttcagcagtggacttctgcactggcagctcggtggtggggacaccaccgag
cacatccagactcactttgagagcaagatggaaattcctcctcgcaggcgtccacctccc
cctttaagcgccacaggtagaaagaaagagcaagaaggcaaaggggatcctgaagagcag
caagagaaaagcatcattgcaaccattgatgacgtcctgtctgctcggccaggggctctt
cctgaagacgcaaaccctggtacccaaaccgaaagcagtaagtttccctttggaatccat
caagccaaaagtcaccgcaatatcaagctgctggaggacgagccgaggagccgggacgag
gctccgctgtgcaccgtcgcgcactggcaggactcgctggctaagcgctgcatctgcgtg
tcgaatatcgtccggagcttgtcttttgtgcctgggaatgacgctgaaatgtccaaacat
ccaggcttggtgctgatcctggggaagctgattcttcttcaccacgagcatcccgagaga
aaacgagcgccgcagacctatgagaaggaggaagacgaggacaaaggggtggcctgcagc
aaagatgagtggtggtgggactgcctcgaggtcttaagggataacacgttggtcaccttg
gccaacatttctgggcagctagacttgtctgcttacacggaaagcatctgcttgccaata
ttggatggcttgctgcactggatggtgtgcccgtcagcagaggcacaagacccctttccc
actgtgggacccaactctgtcctgtcgcctcagagacttgtgctggagacgctctgtaaa
ctcagcatccaggacaacaatgtggacctgatcttggctacgcctccgtttagtcgtcag
gagaaattctatgccacgttagttaggtacgttggggatcgcaaaaacccagtctgtcga
gaaatgtccatggcgcttttatcgaaccttgcccaaggggacgcgctggctgcaagggca
atagctgtgcagaaaggaagcatcgggaacttgataagcttcctagaggatggggtcacg
atggcccagtatcagcagagccagcataacctcatgcacatgcagcccccacctctagag
ccccctagcgtggacatgatgtgcagggcggccaaggctctgctggccatggccagagtg
gacgagaaccgctcagagttccttctgcacgagggtcgattgctggatatctcgatatca
gccgtgctgaactctctggttgcgtctgtcatctgtgatgtactgtttcagattgggcag
ttatga
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integrated database retrieval system
