Lipotes vexillifer (Yangtze River dolphin): 103086381
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Entry
103086381 CDS
T03090
Symbol
MUC16
Name
(RefSeq) LOW QUALITY PROTEIN: mucin 16, cell surface associated
KO
K16145
mucin-16
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103086381 (MUC16)
Membrane trafficking [BR:
lve04131
]
Others
Mucins
Membrane bound mucins
103086381 (MUC16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
TMIE
Motif
Other DBs
NCBI-GeneID:
103086381
NCBI-ProteinID:
XP_007472115
UniProt:
A0A340YKS7
LinkDB
All DBs
Position
Unknown
AA seq
2435 aa
AA seq
DB search
MINVGMSTRSPETATAFKIISSKEPSTSSEMKYTLGNSWNTSTATVPMKTTVEPVILQST
AIESSGISLSHLPTGFMTSAKSPTKGTATTEWVSFSQSEVGTKPHLGTPEGTKKSLGTVS
SVSQESNPKGNIGTGLGKTRDMLRTSLETDTSLPPNLRSSSDEMFVTTDIEAIHPSTNTA
LTHVETTSREHESHSPVLAHTQPPEATSSVVTSSTMWDITAPTSMSGSSETIKIERESVS
SLNTGLRETSTYQETSSATETSTVISNVSTNDATTEVTRTQVTSSSRISIPSPAHFKTSP
NTPTESRTSPSISMFMTESSGMTITTQTGPPGATSQDTLTLDISTKVSGAGTHSTVTQSF
THSEMTTLRSRGPEDVSWTSPASAEKNRSRSSLEPILATSSPSPAPFTLQGNSTFSPVSM
TSALTSGLRKTTEILDTSLEPVTSTPESVNNVLHEILTTSEATTDTKTIHSSTSTSVTDI
GIPSSAHKSQFTVPANTEPSKATSPMVISSTIRDITVSTTISDSSKTTKIVRESISSLTP
GLRDTSTYQEKTSSRDPSKNTAINNVATSSYEHESRSFVSTDSEPSKAVLPMNTATTTGK
TTVSTPKSSYSDTTRIETEKSPSLMFGLRETSTSKETNSSIEPTIILPGVNISSITEVTR
IEDISSTGVLNPSPAISTMSPINSTEIITKRFTLPKMTKSTKKTVTTETGPPAATSQGIF
PWDTSSTTSTVGIHAAVTQRRLHTKLMTAISRGAEVVSWPSPASVKETGSPSSPLIEPAM
TTLSPEPSTLPGRSPSDPTPVTSLLTRGLGKAKDTWGTSVEPVSSSPSSEMSTTIEILST
SEASAGTDAIQTSKITAGTHRANTISGHEAQSSAPADSEPSNVTSPMVTPSPSRDTRVPP
SMPHSLENTVFEIHSTSSLTPELRKNSTVQQNSTATEKIAVPSKLPTDTTTENSRTEPIS
ASSKSISDPVRSTMSPDIPAGIITGPSASPVTTESSEVTMTTQTGPIEATSQDPLTLGTT
TNTSGAEIHSTVTQSFLHSQMTTLSSRGPEDVSWPSPAPVKDTGSPSSPVIVPAMTAPSR
DPSTLPGRSPASPAPVTSLLTHGLGKTKDTLSTSVEPVSSSPSSDISTTIEILSTSEAST
GTDAVQPSKNTAGTNWAYTSSGHEAHSSAPDDSEPSNVMSPMVTPSTSRDTRVSTSMTHS
LETTMFEIHSASSLTPEQRKSSTVQQNSSAIEKIAVLSKVPTDTTTEISRTEPISSSSTS
IPGPVESTMSPDILAGLITRPCASPVTTECAEVTTTNQTGPTEATSRDPLTLGTTTNTSG
AEIHSTVTQSSTHPEMTTLSSRGPEDVSWPSPASVIETGSPSSTVIVAAMRTPSPEPSTL
SGRSPSSPIPVTSLLTRGLGKTKDTLGTILGAVTTLPPTLSSPTVEIISTSEFSTDTAKI
LLPVYTIMSTVGSSSSGHELSSSVPIFPESSSTTYPMGTASSVYETTLSTSMRSSFETKI
LSHLTPRLKETRIALDSSSITLTNTPSSPLSTHDLKGPRTDTTSSVKVSAPDQPLSTQYT
NIPVDTVTRFYTSPSITRSAGITVPESNLSVPVSENTRYLSTDMLSSAETIFANNTLTPS
LSEAMASFATSGVPGAISVSPFSRTESGPGDATMPATAESLPSSASIPFPSLTFRTTDSS
ASPLPHWITSSPATPRIVDTNLEAESQSTAALPLVIASTLQTWTQPVRTSLPPIMDTRMT
ESVGLGTVTSSSQVLSHSTQLTSKDPLLLHSHYLGLIENGFFSDSPGLTQDWPHFTLPTT
AAAIPFLMPFTVNFTITNLHYTEDMRNSDSEIFSATERDLQHLLSLLFKKSSVGSLYTSC
RLTLLRADKDGTSTRMDAVCTYRPDPTGFRLDRERLYWELRQQTHGITRLGPYTLDRNSL
YVNGYNHQYWIPTTSTLVTSTFSPGLPTSLTSTPSSTGMGPALVLFTLNFTITNLFYTPD
MGHRGSAKFNFTEKPLNRLLGPLFKNTSIGPLYSGCRLTLLRTEKDGTATGVDAICTYLP
DPMHPGLDREKLYQELSQLTHGVTQLGTYTLDSNKLYVNGYNEHGPDEPLTTPEPATTFL
PTSSPVQPESTTGYAPQSLSIQSEYQLNFHIINWNLSNPDPMSLEYTALLKDIQDKVTKL
YRGSQLQDIFHSCLVTNLMLDPMSVSIKALFSSKLDSSVIKQVFLDKTFNASSHWLGATY
QVTDVHVTEVEPSIHIPTDQPTICPSFQNLQLNFTVTNLIYSQDIAPGTPKHQRNKRNIE
DALNQLFRXXXSIKSYFSDCQVSAFRSEPPSNHTGVDAQCNFSPLAQRLDRVAIYEEFLW
LTKNGTQLQNFILDRNSVLVHGYSPNRNDVLTENSDLPFWAIILICLAGLLVLITCLICC
FLVTVSRRKEEEDCEAQQQRLGYYYLPHLDLRKLQ
NT seq
7308 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatgtgggtatgtccacaagaagcccagaaacagctacagccttcaaaatcata
agctccaaggagcccagcaccagctcagaaatgaagtacactctgggaaattcttggaat
acttcaacagcaactgtccctatgaagaccacagtggaaccagtcatacttcagtccaca
gccatagagagtagcggcatcagcctctctcacctgcccactggattcatgacatcagcc
aagtcaccaacaaaagggacagcaactacagaatgggtctcattctcccaatctgaggtt
gggaccaagccccatcttgggactccagaagggaccaaaaagtcattgggcacagtgtcc
tctgtctcccaagagtcaaatcctaaaggcaacatagggactggcttggggaagaccaga
gacatgttgaggacgagtttggaaactgataccagtttacccccaaatttgaggagtagc
tcagatgagatgtttgtcaccacagatatagaagcaattcatccttccacaaatacagca
ctgacacatgtagagactaccagtcgtgaacatgaatcacattctcctgtcctggcccac
acacagccacccgaagctacatcttcagtggttacctcctctaccatgtgggacattact
gctcccacatcaatgtctggctcatctgagactataaagattgagagagagtcagtatcc
tctctgaatactggacttagggagacaagtacctaccaggagaccagctctgctacagag
acaagcactgtcatttccaatgtgtccacaaatgatgctactactgaggtcaccaggaca
caagttacctcctctagcaggatatctatcccaagccctgctcacttcaaaacttctcca
aacacacctacagaaagcagaaccagcccctctatatccatgttcatgacagaatcttcg
ggaatgaccatcaccacccaaacaggtcccccaggggctacatcacaggacacacttacc
ttggacatatcgaccaaggtctctggggcagggactcattcgactgtgactcagagtttt
acacactcagaaatgaccactctcagaagcagaggtcctgaggatgtgtcttggacaagc
cctgcctctgcagaaaaaaacaggtctcgctcttccctagaacccatccttgccacatcc
tcaccttctcctgcacctttcacattacaagggaatagtaccttctctcctgtttccatg
acctcagctctcacctctggcttgagaaagaccacagaaattttggacacaagcttggaa
cctgtgaccagtacacctgaaagtgtgaacaacgtcttgcatgagatactgaccacttca
gaagccaccacagacacaaaaacaattcattcttcaacaagcacatcagtaactgatata
gggatccctagttcagcacataaatcacagttcacagtcccagccaacacagagccatct
aaagccacatctccaatggttatctcttctaccataagggacatcactgtctccacaaca
atttcagactcttccaaaactacaaagattgtgagagagtcaatatcctccttgacccct
ggactgagggataccagcacctatcaggagaaaacctcaagtagagatccttccaaaaac
acagccataaacaatgtggcgaccagcagttatgaacatgaatcacgttcctttgtctca
actgactcagaaccatccaaagccgtattaccaatgaatacagccaccaccacagggaaa
accacagtttccaccccaaagtctagctactctgacactacaagaattgagactgagaaa
agtccctccttaatgtttggactgagggaaaccagcacctccaaggaaaccaactcatcc
atagagccaaccattatccttcctggtgtgaacattagttctattactgaggtgacaagg
atagaagacatctcctctactggtgtactcaatccaagccctgctatttccaccatgtca
ccaataaactccacagaaatcatcacaaaacgttttactttacccaaaatgacaaaatca
acaaaaaagactgtgaccactgaaacaggtcctcctgcagctacatcacagggtatattt
ccctgggacacatcaagcacaacatccacggtagggatccacgcagcagtgactcagaga
cgtctacacacaaagctgatgactgccattagcagaggtgctgaggttgtgtcttggcca
agccctgcctctgtgaaagaaactggctctccatcttccccattgattgaacctgctatg
acaacactctcacctgagccatccacattaccagggaggagcccctccgatcctacacct
gtgacctcacttctcacccgtggtctggggaaggccaaagacacatggggtacaagtgtg
gaacctgtgtccagttcaccttcaagtgagatgagcaccaccattgagatactgtccaca
tctgaagcctccgcaggtacagatgcaattcagacctccaaaatcacagctgggacccac
cgcgccaacacaatttctggacatgaagcacagtcctctgccccagctgactcggagcca
tcgaatgtcacgtccccaatggttactccttccccctctagggacacccgtgttcctcca
tcaatgcctcactctttagaaaatacagtgtttgagatacactccacatcctctctgacg
cctgaactgaggaagaacagcaccgtccagcagaacagcacagccacagagaaaatcgcc
gtcccttccaaactacccactgatacgactactgagaactctaggacagaacccatctcc
gctagcagcaagtccatctctgaccctgttcggtccacgatgtcgccagatatccctgca
ggcatcatcactgggccctccgcctctcctgtgacaacagaatcttcagaagtgaccatg
accacccaaacaggtcccattgaggctacatcacaggacccacttaccttgggcactaca
accaacacctctggggcagagattcactcgactgtgactcagagttttctgcactcacag
atgaccactctcagcagcagaggtcccgaggatgtgtcctggccaagcccggcccctgtg
aaagatactggctctccatcctccccagtgattgtacctgccatgacagcaccctcccgt
gacccatccacattaccagggaggagccccgcctctcctgctcccgtgacctcacttctc
acccatggtctggggaagaccaaagacacattgagtacaagtgtggaacctgtgtctagt
tcaccttcaagtgatatcagcaccaccattgagatactgtccacctctgaagcctccaca
ggtacagatgcagttcagccctccaaaaacacagctgggaccaattgggcgtacacaagt
tctggacatgaagcacattcgtctgccccagatgactcagagccatcgaatgtcatgtcc
ccaatggttactccttccacctctagggacacccgtgtttccacatcaatgactcactct
ttagaaactacaatgtttgagatacactccgcatcatccctgactcctgaacagaggaag
tccagcaccgtccagcagaacagctcagccatagagaaaatcgccgtcctttccaaagta
cccactgatacgactactgagatctctaggacagaaccgatctcctctagcagcacgtcc
atccctggccctgttgagtccacgatgtcgccagacatccttgcaggcctcatcaccagg
ccctgtgcctctcctgtgacaactgaatgtgcagaagtcaccacgaccaaccaaactggt
cccactgaggctacgtcacgggacccacttaccttgggcactactaccaacacctcaggg
gcggagattcactcgactgtgactcagagttctacgcacccagagatgaccactctcagc
agcagaggtcccgaggatgtgtcttggccaagccctgcctctgtgatagaaactggctct
ccatcttccacagtgattgtagctgccatgagaacaccctcccctgagccatccacttta
tcagggaggagcccctcctctcctatccctgtgacctcacttctcacccgtggtctgggg
aagaccaaagacacactgggtacaatcttgggagcagtgaccacgttacctccaactttg
agtagtcccacagttgagataatttccacctctgaattctccacagatacagcgaaaatt
cttcttcccgtatacacaataatgagtactgtgggttccagcagttctggacatgaacta
agttcctctgtcccaatttttcctgagtcctccagcaccacatatcctatgggtactgct
tcctccgtgtatgagaccactctctccacatcaatgcgttcctcctttgagacgaagata
ctttcccatctgactcctagactgaaggagacaaggatagccttggattccagctcaatc
acactcacaaacacaccttcatcgcctctgtccactcacgatttgaagggtcccaggact
gatactacatcttctgtgaaagtatctgcaccagatcagcctctgtctacacagtatact
aacattccagtggacacagtcacacgcttttacacttctccctccattacaaggtctgct
ggcataactgtcccagaatccaatctttctgtgcctgtatcagaaaatacacgttaccta
agcacagatatgctgtcttcagctgagaccatttttgctaataacacactaacaccttct
ttgtcagaggccatggcttcctttgctacatctggagttccaggtgccatttcagtcagt
ccattttctaggacagaatcaggccctggggatgctactatgcccgccactgcagagagt
ctaccttcttcagcttcaataccattcccctctttgaccttccgtaccactgattcttca
gccagcccactcccccactggattacttcctcaccagctaccccaagaatagtagacacc
aaccttgaggcagagagccaaagcactgctgcattacccttggttatagccagtactttg
cagacttggacgcagccagtcaggacatctttaccacccattatggataccagaatgaca
gagagtgttggtttgggaacagtgacaagttcttctcaagttctttcacactcaacccag
ttgacaagtaaggacccactgctcctacactctcattatttggggctcatagaaaatggc
ttcttttccgacagcccaggcttgactcaggactggcctcattttactctccccaccact
gcagctgcaattcctttcttgatgccttttaccgtcaacttcaccatcaccaacctgcac
tacacggaggacatgagaaactcggactctgagatattcagtgccactgagagagacctg
cagcacctgctcagtcttctgttcaaaaagagcagtgttggttccctgtataccagctgt
agactgaccttgctcagggctgacaaggatggaacaagcaccagaatggatgcggtctgc
acctaccgcccagatcccacaggcttcaggctggacagagaacggctgtattgggaacta
aggcaacagacccatggtatcactcggttgggcccctacaccctggacaggaacagtctc
tatgtcaatggttataaccatcagtactggatccccaccaccagcactctggtgacctct
acattctctccaggacttccaacatctctgacctccacccccagctccacaggcatgggc
ccagccctggtgctgttcacccttaatttcaccatcaccaacctgttctataccccagac
atggggcacagaggctctgcaaagttcaacttcactgagaagcctctgaatcgcctgctt
ggtcctctgttcaagaacaccagtatcggcccactgtactctggctgcagactgaccctg
ctcaggactgaaaaggatgggacagcaactggagtggacgccatctgcacctaccttcct
gaccccatgcatcctgggctggacagagaaaagctgtaccaggagctgagtcagctgact
catggagtcactcagctgggcacctacaccctggacagtaataagctctatgtcaatggt
tataatgaacatggtccagatgagcctcttacaactcccgaaccagctaccacattcctg
cctacttcatcacctgtacaaccagaatccaccacaggctatgcaccccagagtttatct
atccagagcgagtaccagctaaatttccacatcatcaactggaacctcagcaacccagac
cccatgtccttagagtacactgccctgctgaaggacatccaggacaaggtcacaaaactg
tacagaggcagccagctacaagacatattccactcctgcctggtcaccaacctgatgctg
gatcccatgtcggtcagcatcaaggcattgttctcctccaaactggactccagcgtgata
aagcaagtgtttctagacaagacctttaatgcctcatcccactggctgggtgccacctac
caggtgacagatgtgcatgtgacagaagtggagccatcaattcatataccaacagaccaa
ccaacaatctgtcccagcttccagaacttgcagctgaatttcactgtcaccaacttaatc
tattcccaggacatagccccaggcacccccaaacaccagcggaacaagagaaatattgag
gatgcgctcaaccagctcttccgnnnnnnnngcagcatcaagagttatttttctgactgt
caagtttcagcattcaggtccgagccccccagcaaccacactggggtagatgctcagtgt
aacttctcaccattggctcagagactggacagagttgccatctatgaggaattcctgtgg
ctgaccaagaacggtacccagctgcagaattttatcctggacaggaatagtgtccttgtg
catgggtattctcccaatagaaacgatgtcttgactgagaattcggacctccccttctgg
gccatcatcctcatctgcctggcaggactcctggtgctcatcacgtgcctgatctgctgt
tttctggtcaccgtctccaggcggaaggaggaggaagactgcgaggctcagcaacaacgc
ctgggctattattacctgccacacctggacctgaggaagctgcaatga
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integrated database retrieval system
