Lipotes vexillifer (Yangtze River dolphin): 103086478
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Entry
103086478 CDS
T03090
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103086478 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103086478 (GSPT1)
03012 Translation factors [BR:
lve03012
]
103086478 (GSPT1)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103086478 (GSPT1)
Translation factors [BR:
lve03012
]
Eukaryotic type
Release factors
103086478 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103086478
NCBI-ProteinID:
XP_007462879
UniProt:
A0A340XU59
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MDPGSGGGGGGGGGGGSSSSSDSAPDCWDQADMEAPGPGSCGGAGGPLAAAAEAQREHLS
AAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQSPAPPPGAAANNHGAGSGAGGPSAPVE
PSQEEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP
TEESAQEIMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD
KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH
KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM
DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL
PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE
VLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH
KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT
ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggcagtggtggcggcggtggtggcggtggcggcggcgggagcagcagcagc
agcgactcagcaccggactgctgggaccaggcagacatggaagcccccgggccaggctcg
tgcggcggcgccggcggtcccttggcggcggcggccgaggcccagcgtgagcacctcagc
gcggccttcagccggcaactcaacgtcaacgccaagcccttcgtgcccaacgtccacgcc
gccgagttcgtgccgtccttcctgcggggcccggcccagtcgccggcacccccacctggc
gccgccgccaacaaccacggagccggcagcggcgcgggaggcccttcggcacctgtggaa
ccttctcaagaggaacagtcattgttgtgtgaaggttcaaattcagctgttagcatggaa
ctttcagaacctgttgtagaaaacggggagacagaaatgtccccagaagaatcatgggag
cacaaagaagaaataagtgaagcagagccagggggtggttctttgggagatggaaggccc
acagaggaaagtgcccaggaaatcatggaggaggaagaggaaataccaaaacctaaatct
gtggttgcaccaccaggtgctcctaagaaagaacacgtaaatgtagtattcattgggcat
gtagatgctggcaagtcaaccattggaggacaaataatgtatttgactggaatggttgat
aaaaggacacttgagaaatatgaaagagaagctaaagaaaaaaacagagaaacttggtac
ttatcttgggccttagacacaaatcaggaagaacgagacaagggtaaaacagtagaagtg
ggtcgtgcctattttgaaacggaaaagaagcattttacaattctagatgcccctggccac
aagagttttgtcccaaatatgattggtggtgcttctcaagcagatttggctgtactggtc
atctctgccaggaaaggagagtttgaaactggatttgaaaaaggaggacagacaagggaa
catgcaatgttggcaaagacagcaggtgtaaaacacttaattgtgcttattaataagatg
gatgatccaacagtaaattggagcaatgagagatatgaagaatgtaaagagaaactagtg
ccatttttgaaaaaagttggcttcaatcccaaaaaggacattcacttcatgccctgctca
ggactgactggagcaaatcttaaagagcaatcagatttctgtccttggtacattggatta
ccatttattccatatctggataatttgccaaacttcaatagatcagttgatggaccaatc
aggctgccgattgtggataagtacaaggatatgggcactgtggtcctgggaaagctagaa
tcaggatctatttgtaaaggtcagcagcttgttatgatgccaaacaagcacaacgtggaa
gttcttggaatcctttctgatgatgtagaaactgattctgtagccccaggtgaaaacctc
aaaatcagactgaaaggaattgaagaggaggagattcttccagggttcatactttgtgat
cctaataatctttgtcattctggccgcacatttgatgcccagatagtgattatagagcac
aaatccatcatctgcccaggttataatgcagtgctgcatatccatacctgtattgaagaa
gtcgaaataacagccttaatctgcttggtagacaaaaaatcaggagaaaaaagtaagact
cgaccccgttttgtgaaacaagatcaagtatgcattgcccgcttgagaacagcaggaacc
atctgccttgagacctttaaagacttccctcagatgggtcgttttactttaagagatgag
ggtaagaccattgcaattggaaaagttctgaaactggttccagagaaagactaa
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