Lipotes vexillifer (Yangtze River dolphin): 103087670
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Entry
103087670 CDS
T03090
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103087670 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103087670 (ERCC6)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103087670 (ERCC6)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103087670 (ERCC6)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103087670 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103087670
NCBI-ProteinID:
XP_007446300
UniProt:
A0A340WGY4
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MPNERIPHSSQTQEQDCSQSQAISESAEETIKQENHGDVELGESLPSCSPANGPSTSAKG
YPLELPRRGPALLHINRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
SRVGQLANAEKEYRSVLDDLMSCTTSLRQINKIIEQLSPQADTNKDINRKLDSVKRQKYN
KEQQLKKITAKQKCLQTLVGGAEVKVELDHASLEEEDAEAGPSSLGSMLMPAQETAWEEL
VRTGQMTPFGTQIPQKQEKKPRKLMLNEASDFEKYLADQAKLSFERKKQACNKRATKKAP
ASVTSELSSTLSENKPDKRGKVLSKTDKRLKKHIKKLQKRALQFQGQVGLLKGKKPLECG
VRPKTEGDSEDEVSEYLPTEWEQGEAAGADLSGEDADCDRRRVLSRQKRQKKVTVQEIDD
DFFPSSGEEAEAAGGGGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLQDKEKSLRLEDDSE
ESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA
GLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKK
EKLIRDIAHCHGILITSYSYVRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRT
PHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTA
YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYR
ILNGEMQVFSGLVALRKICNHPDLFSGGPKNLKGIPDEELGEDQFGHWKRSGKMIVVESL
LKIWHKQGQRVLLFSQSRQMLDIFEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSI
FVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDVQARERAWRIGQKKQVTVYRLLTAGT
IEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDTSQSTETSAIFAGTGS
DVQTPKRHLKRKLQLAFGTDQNIPVGKKFPGSNTSANVATSSEEKSTAIGPKVNAVTSNL
GDPLRDAPQTSCSLTNSERLGEETDAVSRLQDSSVIHGNGEGSGSPRISKMYRMSGEGSI
DEKEGLSDKRESCRVQTEPLWENEQTENNFYKHKSKTKHHVAEEKTLEKHLRLKRKLTSS
KHRRDAKFEGTRIPHLVRKKHYRRQDSENESEPRERSHDDYVLEKLFRKSVGVHSIMKHD
AIMDGASPDYVLVEAEANRVAQDALKALRLSRQRCLGAASGVPTWTGHSGVAGTPAGRKR
RFGQKRSSSFSVQHPSSTSPKEKCQDSTMKKDGKDNVSEHFRGKVEDAEPSSGALTSSSL
LAKMRARNHLILPERLESESGYLPEASAPPPSSVEHDDLLVEMRNFIAFQAQVDGQASTR
EILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgagagaatcccccactcaagtcaaactcaggagcaagactgttcacagagt
caggctatcagtgagagtgcagaggagacaatcaagcaggagaaccatggcgacgtggag
ctgggggagagcctcccctcttgttcccctgctaatggaccctccacttccgccaagggg
tatcccttggaacttccaaggagagggccagccctgctgcacatcaacagacatcagatc
caggcggtggagcccagtgcacaggccctggagctgcagggtttgggtgtggacgtctat
gaccaggatgtgctggagcaaggggtgcttcagcaggtggacagcgccattcatgaggcc
agccgtgtgggccagcttgccaacgcggagaaggagtatcggtcagtgctggacgacctc
atgtcatgtacgacatccctaaggcaaatcaataaaattatcgaacaacttagccctcaa
gctgacaccaacaaagacatcaacaggaaactagattctgtaaaacgacagaagtataac
aaggaacaacagctgaaaaagatcacagcaaaacaaaaatgtctccagactctcgttggg
ggagcagaggtaaaagtcgaactagatcatgccagtctggaggaggaggatgcagaagca
gggccgtcctccctcggcagcatgctcatgcctgctcaggaaactgcttgggaagagctc
gtccgcactggtcagatgacaccttttggtacccagatccctcagaagcaggagaaaaag
cccagaaaactaatgctcaacgaagcatcagattttgaaaagtatttggcagatcaagca
aaactgtcctttgaaagaaagaagcaagcttgtaataaaagagcaactaaaaaagccccg
gcctcagtcacttctgagctgagctcaacactcagtgaaaacaaaccagacaagagaggc
aaagttctctcgaaaacagataagcgcttgaaaaaacacatcaagaaactccagaagagg
gctcttcagttccaggggcaggtgggattgctaaagggaaagaaacccttggagtgtggt
gtgaggccaaagacagagggagactctgaggatgaagtgtccgagtacttgcccacggag
tgggagcagggggaggcggcaggggctgacctgtctggggaagacgctgactgtgaccgg
agacgggtgctcagtcgccagaaacggcagaagaaagtcacagtgcaggagattgatgat
gacttctttccaagttctggggaagaagctgaagccgcaggaggaggaggaggaggtcgg
aaagtagtgagatgccgagatgatggagatgaagattattataagcagcggttaaggaga
tggaataaactgagactgcaggacaaagagaagagtttgaggcttgaagatgattctgag
gaaagtgatgccgaatttgacgaaggttttaaagtgccgggttttctgttcaaaaagctt
tttaagtaccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcagga
ggaattctgggagacgaaatgggattgggcaagaccatccagataattgccttcttggca
ggtctgagctacagcaagatcaggactcgtggttcaaattacaggttcgaggggttgggt
ccgactataattgtctgtccgacgacagtgatgcatcagtgggtgaaggaatttcacacg
tggtggcctccattcagagtggcagttctgcacgaaactgggtcctttacccacaaaaag
gagaaactaattcgagatattgctcattgtcatgggattttgatcacttcttactcctac
gttcgactgatgcaagatgatattagcaggcatgactggcactacgtgatcttggacgaa
ggacacaaaattcggaatccaaatgctgccatcactcttgcttgcaaacagttccgcacc
cctcatcgcatcatcctgtctggctcaccgatgcagaataatctccgtgagctgtggtcc
ctctttgatttcatcttcccgggaaagttgggcacgttgcctgtgtttatggagcagttc
tcagtccccatcaccatgggagggtatgcaaatgcctccccagtacaggttaaaactgct
tataagtgtgcatgtgttctacgagataccataaatccatacctactgcggagaatgaag
tcggatgtcaaaatgagcctttctttgccagataaaaatgaacaggtattattttgccgt
cttacagatgagcaacataaagtctaccaaaatttcattgattccaaagaagtttacaga
attctcaatggagagatgcaggttttctctggacttgtagccctaagaaaaatctgcaac
caccctgatctcttttctggaggccccaagaatcttaaaggtattccagatgaggaacta
ggggaagatcagtttggacactggaaacgttctgggaaaatgatagtcgttgagtccttg
ttgaaaatatggcacaagcagggccaacgagtattgctgttttctcagtccagacagatg
ttggacatatttgaagtattccttagggcccaaaagtattcctatctcaagatggatggc
accactgcgatagcttcaagacaaccactgattacaagatacaatgaggacacatccata
tttgtgtttcttctgaccactcgggtgggtggtctaggagtcaacctgacgggggcaaac
cgagtcatcatctatgaccctgactggaacccaagcacagatgtgcaggcccgggagcga
gcgtggcggataggccagaagaaacaggtgacggtgtacaggcttctgaccgcaggcacc
attgaagagaagatttaccaccgacaaatcttcaagcagtttttgacaaatagagtgcta
aaagatccaaagcaaaggcgatttttcaaatccaatgatctttatgagctgtttactctg
actagtcctgatacatcccagagcactgaaacaagtgctatttttgcaggaactggttca
gatgttcagacacccaaacgccatttaaaaagaaaacttcaactggcttttggaacagac
cagaacattccagtaggtaaaaagttccctggttctaacacatctgcaaatgttgccacg
tcatctgaagagaaatctacagctataggacctaaagtgaatgcagtaacttctaatcta
ggtgatcctttgagagatgcccctcaaacatcttgtagtctaactaacagtgagaggctt
ggagaagagacagatgcagtgtccagactgcaggattcctcagtgattcatggaaacggg
gaaggttcaggttctccaagaatcagcaaaatgtacaggatgtctggtgagggaagcatc
gatgaaaaggagggtctttctgataaaagagaaagctgccgggttcaaacagaacctctt
tgggagaatgagcaaacagaaaataatttttataagcacaagtcgaaaacgaaacatcat
gtggcagaagaaaagaccctggagaaacatctgaggctgaagcgaaagcttacgagctct
aagcaccgcagagatgccaagtttgagggaactcgaattccgcacctggtgaggaagaag
cactaccggaggcaagacagtgaaaatgagagcgagcccagggaacgcagccatgacgac
tacgtgctggaaaagcttttcagaaaatcagtgggtgtgcacagcatcatgaagcatgat
gccatcatggacggagccagtccagactacgtgctggtggaggcagaggccaaccgtgtg
gcccaggatgccctcaaagcactgagactctctcggcagcggtgtctgggagcagcatct
ggtgttcccacctggaccggccacagcggggtggctggtacaccagcaggaagaaagaga
aggtttggtcagaaaaggagctctagcttctctgtgcagcatccctcttcaacgtctcca
aaggagaaatgccaggacagcactatgaaaaaggatggaaaagataatgtttcggagcat
tttagaggaaaagttgaagatgcagagccttcatccggggccctcacttcgtcctcactg
ttggctaagatgagagccagaaaccacctaattttgccagagcgcttagaaagtgaaagt
gggtaccttccagaggcttctgctcctccgccttccagcgtggaacatgatgaccttctg
gtagaaatgagaaacttcattgcctttcaggcccaagttgatggccaggccagcactcgg
gagatactgcaggagtttgaatccaagttatcagcatcacagtcttgtgtctttcgagaa
ctattgagaaatctgtgcacttttcatagaacttcaggtggtgaaggaatttggaaactc
aagccagaatactgctag
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integrated database retrieval system
