Lipotes vexillifer (Yangtze River dolphin): 103090958
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Entry
103090958 CDS
T03090
Symbol
COL19A1
Name
(RefSeq) collagen alpha-1(XIX) chain
KO
K24340
collagen type XIX alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103090958 (COL19A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103090958 (COL19A1)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103090958 (COL19A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103090958
NCBI-ProteinID:
XP_007447270
UniProt:
A0A340WJU6
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
METGKNAKVQGVWPLDPMVLRRHETRWLLEALVLGSDAPASCFRFREKQCPILRKEGHQF
TPDYRDNVEVSGFDLGERFSLRRVFCEGDKTCIKLGSSFLIRDTIQVFPKGLPEEFAIAA
VFRVPRSTKKERWFLWQVLNQQNMPQVSIVVDGGKKMVEFMFQAVEGDVLNYVFKNRELR
PLFDRQWHKLGFSIQSQAISVYTDCNLVASRHIDGKGTVDFHGRTVIATRASDGRPVDVE
IHQLQIYCNSNFIAQETCCEISDPKCPEQHSFGSTAASFVPAHASRMSAFLPAKQELTDQ
CQCIPDKGEAGLLGVPGSPGQKGDKGEQGENGLHGAPGLPGQKGEQGFEGSKGEIGGKGA
QGEKGDPGLAGVNGQDGLKGDVGPHGPPGPKGEKGDLGPPGPPALTGSLGIQGPQGPPGK
EGQRGRRGKPGPPGKPGPPGPPGPPGIQGMQQTLDGYYHKGNLGEHGAGGPKGEKGEIGP
PGFPGSIGPKGEKGESGEPFTKGEKGDRGEPGITGSQGIKGEPGDPSPPGVIGSSGLKGQ
QGPAGPMGPRGLPGDTGLPGEHGIPGKQGIKGEKGDPGGIVGPPGLPGPKGEAGPPGKSL
PGEPGLDGNPGAPGPRGPKGERGLPGIHGSPGDIGPPGIGIPGRTGSQGPAGEPGIQGPR
GLPGLPGAPGTPGNDGAPGRDGKPGLPGPPGDPIALPLLGDIGALFKNFCGNCQASVPGL
KSSKGEEAGTGEPGQFDSVAQKGDVGPRGPPGVPGREGPKGSKGERGYPGIRGEKGNEGL
QGVPGLPGAPGPTGPPGLLGRTGHPGPSGTKGDKGSEGPPGTPGPPGPPGLPFNEGNGMG
SLYKIQGGVNAPSFPGPPGPPGPKGDPGPVGEPGVMGLPGLEGFPGIKGDRGPAGPPGVA
GISGKPGAPGPPGIPGEPGERGPVGDIGFPGPEGPSGKPGINGKDGLPGAQGIMGKPGER
GPKGERGDQGIPGDRGPQGERGKPGLPGIKGAIGPMGPPGNKGSPGHQGLPGHPGLPGSP
ADVLSFEEIKKYINQEVLRIFEERMAVFLSQLKLPAAMLAAQAHGRPGPPGKDGLPGPPG
DPGPQGYRGQKGERGEPGVGLPGSPGLPGTSAPGLPGSPGAPGPQGPPGPSGRCNPGDCL
YPVSHARQQTGGK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggagactgggaagaacgcgaaggtgcaaggtgtgtggccactggatcccatggttttg
aggcgccatgagacccgctggctcttggaagctttggttctgggcagcgatgctcctgct
tcctgcttccgcttccgtgagaaacaatgtcctatactgaggaaagagggacaccagttt
acaccagactacagagacaacgttgaagtttcaggttttgacctaggagagcgcttttct
ctgagacgtgtgttttgtgaaggtgataaaacttgtatcaaattgggaagttcatttctt
attagagacaccattcaggtgtttcccaaaggccttcctgaggagtttgccatagcagcc
gtgtttcgggtaccaagaagcaccaaaaaggaacggtggtttctgtggcaggttttaaac
cagcagaatatgccacaggtttctatagtagttgatggtggaaagaagatggtggaattt
atgttccaagctgtggagggagatgtgttgaactacgtttttaaaaatcgagaactccgt
cctttgtttgatcgtcagtggcataaacttggcttcagtatacaatcccaggccatttcg
gtctatacggactgtaacttagttgcaagccggcatattgatggaaagggcactgtggac
ttccacggaaggactgttattgcaacccgagcttcagatggcaggcctgtggacgttgaa
attcaccaacttcaaatctactgtaactcgaacttcatagctcaagaaacgtgttgtgag
atatcagaccctaagtgcccagagcagcatagctttggaagtactgcagcatcattcgta
cccgctcatgccagtagaatgtctgcctttctgccagcaaagcaggaacttacagaccag
tgccagtgcattccagacaagggagaagcaggattactgggagttccaggctcacctgga
cagaagggggacaaaggagagcagggtgaaaatggtttacatggagctccaggcttacct
ggtcaaaagggagagcaaggctttgaaggtagcaaaggagaaattggtggaaagggtgca
caaggagaaaaaggagatccaggtttggccggagttaatgggcaagatggtttgaaaggt
gacgtgggtccgcatggtccacctggcccgaaaggagaaaagggagatctgggacctcca
ggaccgccagccttaactggctccctggggatccaaggcccccaaggcccacctggaaaa
gagggtcagaggggaagacgaggaaaaccaggtcctccaggaaaaccagggcctccagga
ccacctggacctcctggaatacaaggaatgcaacagactcttgatggatattatcacaag
ggaaaccttggtgagcatggagctggtggcccaaaaggagagaagggtgaaattggacca
ccaggatttccaggctctattggccctaaaggtgaaaaaggagaatcgggggaacccttt
acaaaaggtgaaaagggagatagaggagaacctggaataacaggatcacagggaataaag
ggcgagcctggagatcctagcccccctggtgtaataggaagctcaggactaaagggtcag
caaggacctgcaggccctatgggacccagaggactaccaggagataccggattgccagga
gaacacggtatcccaggaaaacaaggcattaagggagaaaagggagacccaggtgggatt
gtagggcctcctggacttccaggtccaaaaggtgaggctggtcctccaggaaaaagcctg
ccaggggaaccaggattagatggaaatcctggagcacctggtccgcgagggccaaaggga
gaaagaggactgccaggtatccacggctccccaggtgacataggccccccagggatagga
attcctggccgaactggctcccaaggcccagctggagagccagggattcagggtcctcga
ggtctccctgggttgccaggagctccaggaaccccagggaatgatggagctcctgggagg
gatggaaagccaggtctgccaggccccccaggtgacccgattgcacttcctctcttggga
gacattggggccttgttcaagaacttctgtggcaactgccaagccagtgtccctgggctg
aaaagcagcaaaggagaagaagcaggcactggtgagcctggacagtttgattctgtagcc
cagaagggtgatgtagggccacgaggtcctccaggagtcccaggcagagagggaccaaag
gggagcaaaggagagcgaggctaccccgggatacgtggggagaaaggcaatgagggtctt
caaggcgttccgggccttccaggtgctcctggcccgactggaccccctggcttgctggga
agaacgggacatcctggcccctcgggaacaaagggtgacaagggcagcgagggaccccct
gggacacctggaccacctggaccacctggtttaccattcaatgaaggaaatggaatgggc
agtttatataaaatccagggaggtgtgaacgctcccagttttccagggccacctggcccc
cctggccccaaaggtgatcctggcccagtgggagaacctggtgtgatggggttgccagga
ttagaaggatttcctggtataaagggagatcgaggcccggcaggtccccctggagtagcg
ggaatctcggggaaacccggagccccaggccctccaggaattccaggagaaccgggtgag
agagggcctgttggagacataggtttccctggaccagaaggaccctcaggaaagcccgga
ataaatgggaaagatggattaccaggtgcacagggcatcatgggtaagcctggagagaga
ggccccaaaggagaacggggtgatcagggaattccaggagaccgaggcccacagggtgaa
cgcggaaaaccaggccttccaggcataaagggagccataggtcctatggggcccccagga
aataagggctccccggggcaccaaggccttccaggccacccaggcctccccggctccccg
gctgatgtgctttcatttgaagaaataaagaaatatattaatcaagaggttctgaggatt
tttgaagagaggatggctgtgttcctgtcccaactcaagctaccagcagcaatgctggct
gcccaagctcatgggaggcctggtccaccaggaaaggatgggttacctgggccaccagga
gaccctgggccccaaggctaccgaggacagaagggagaaagaggggaaccgggagtaggg
cttccagggagcccaggtcttcctgggacctcagctccgggcctgccaggctcaccaggt
gccccagggccccagggccccccaggacccagtggaaggtgtaacccaggagactgcctg
tatcctgtctctcacgcccgtcagcagacaggtgggaaataa
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