Limimaricola variabilis: T8T21_15855
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Entry
T8T21_15855 CDS
T09625
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00521
Streptomycin biosynthesis
lvr00523
Polyketide sugar unit biosynthesis
lvr00541
O-Antigen nucleotide sugar biosynthesis
lvr01100
Metabolic pathways
lvr01110
Biosynthesis of secondary metabolites
lvr01250
Biosynthesis of nucleotide sugars
Module
lvr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
T8T21_15855 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
T8T21_15855 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
T8T21_15855 (rfbC)
Enzymes [BR:
lvr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
T8T21_15855 (rfbC)
BRITE hierarchy
Motif
Pfam:
dTDP_sugar_isom
DUF4360
Motif
Other DBs
NCBI-ProteinID:
WPY96251
LinkDB
All DBs
Position
unnamed01:10500..11057
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AA seq
185 aa
AA seq
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MKITETDLPGVLILEPRRFGDDRGWFMESWNRETLRGHGIEIDFVQDNHSYSASRGTVRG
LHYQSPPHAQAKLVRVGRGTVRDVAVDVRRGSETYGCHVAVDLSAENGRQLLVPAGFLHG
FATLTPDVELLYKCSDVYAPDCDGAVAWDDPDLGIDWGIDPATATLSDKDRAAPGFANWT
SPFTA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgagacggacctgcccggcgtgctgatcctcgagccgcgccgcttcggt
gacgatcgtggctggttcatggaaagctggaaccgcgagacgctgcgcgggcatggcatc
gagatcgatttcgtgcaggacaaccactcctactccgcgtcccggggcacggtgcggggc
ctgcactaccagagcccgccgcatgcgcaagccaagctggtccgggtcggccggggcacg
gtgcgcgacgtggccgtcgacgtgcgccgcggctccgagacctacggctgccatgtcgcg
gtcgatctctcggccgagaacgggcggcagctgctggtcccggcgggcttcctgcatggc
ttcgcgacgctgacgccggatgtcgagctgctctacaagtgctcggacgtctacgcgccc
gattgcgacggcgcggtggcctgggacgatcccgatctcggcatcgactggggcatcgac
cccgctaccgccacgctgtcggacaaggaccgcgccgcgccgggcttcgccaactggacc
agccccttcacggcctga
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