Yoonia vestfoldensis: LOKVESSMR4R_00288
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Entry
LOKVESSMR4R_00288 CDS
T04854
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lvs
Yoonia vestfoldensis
Pathway
lvs00300
Lysine biosynthesis
lvs01100
Metabolic pathways
lvs01120
Microbial metabolism in diverse environments
lvs01230
Biosynthesis of amino acids
Module
lvs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lvs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOKVESSMR4R_00288 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvs01002
]
LOKVESSMR4R_00288 (dapE)
Enzymes [BR:
lvs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LOKVESSMR4R_00288 (dapE)
Peptidases and inhibitors [BR:
lvs01002
]
Metallo peptidases
Family M20
LOKVESSMR4R_00288 (dapE)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ART99628
UniProt:
A0A1Y0E881
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Position
complement(279971..281113)
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AA seq
380 aa
AA seq
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MIDPVALTADLVRCPSVTPVEGGALVLLEKLLTEGGFTCTRVDRGDVSNLFARWGRQGAN
RTFGFNGHTDVVPLGDAAAWTVPPFGAVIKDGYLYGRGSTDMKSGVAAFAAAALDFVADT
PPDGAIILAITGDEEGDARDGTTALLDWMAANNETMSVCLVGEPTCPDVMGEAMKIGRRG
SLNATFTVTGVQGHSAYPHRAKNPLPAIARLVDILASHPLDQGTAHFDPSTLAVVTIDTG
NAATNVIPAQTWAGVNIRFNDLHSGASLTDWMQGIADQVAADFGVRIAMQVKVSGESFIT
PPGALSDLVGRAVKAETGRDPVLSTSGGTSDARFVQHHCPVVEFGLVGQTMHQVDERVAV
DQILQLKAIYSRILRDYFAT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcccgtcgccctgaccgccgatctggtccgctgcccatccgtcacgcccgtc
gaaggcggcgcgctggtcttgctcgaaaagctgctgaccgagggcggctttacctgcacc
cgcgttgatcggggcgatgtgtccaaccttttcgcgcgttgggggcggcagggcgcgaac
cggacctttggcttcaacggccataccgatgtcgtgcctttgggggacgcggccgcatgg
acggtgccgcctttcggcgcggtcatcaaggacggctatctttacgggcgcgggtccacc
gatatgaaatcgggcgtcgcggcctttgccgccgcagcactggatttcgtggccgacacg
ccccccgatggcgcaatcattctggcgatcaccggggacgaggaaggcgacgcgcgcgat
ggcaccaccgccctgctggactggatggccgccaataacgaaaccatgtcggtctgtctg
gtgggcgagccgacctgccccgatgtcatgggcgaggcgatgaagatcgggcggcgcggg
tcgctgaacgccacctttaccgtgaccggtgtgcagggccattctgcctatccgcatcgc
gcgaaaaatccgctgccggcgatcgcgcggctggtagatattctggccagccacccgctg
gaccaaggcaccgcgcattttgatccctcgacccttgcggtggtgacaatcgacaccggc
aatgcagcgaccaatgtgatccccgcgcagacgtgggcgggggtgaatatccggttcaac
gacttgcatagcggggccagcctgacggactggatgcagggcatcgccgatcaggtcgcc
gccgatttcggcgtgcggatcgcgatgcaggtcaaagtctcgggcgaaagctttatcaca
ccgcccggcgcgctgtccgatctggtgggccgcgcggtcaaggccgaaaccggccgcgat
ccggtgctgtcgacctcgggcgggacgtcggatgcgcggtttgtccagcatcattgccct
gtcgtggaattcgggctggtgggtcagacgatgcatcaggtcgatgaacgggtggcggtg
gaccagatcctgcagctcaaggcgatctacagccgcatcctgcgtgattactttgcaacc
tga
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