KEGG   Leptonychotes weddellii (Weddell seal): 102729200
Entry
102729200         CDS       T08708                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww04151  PI3K-Akt signaling pathway
lww04510  Focal adhesion
lww04512  ECM-receptor interaction
lww04820  Cytoskeleton in muscle cells
lww04926  Relaxin signaling pathway
lww04933  AGE-RAGE signaling pathway in diabetic complications
lww04974  Protein digestion and absorption
lww05146  Amoebiasis
lww05165  Human papillomavirus infection
lww05200  Pathways in cancer
lww05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:lww00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102729200
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102729200
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102729200
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102729200
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    102729200
  09154 Digestive system
   04974 Protein digestion and absorption
    102729200
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102729200
  09162 Cancer: specific types
   05222 Small cell lung cancer
    102729200
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102729200
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    102729200
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    102729200
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lww04147]
    102729200
   00536 Glycosaminoglycan binding proteins [BR:lww00536]
    102729200
Exosome [BR:lww04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102729200
Glycosaminoglycan binding proteins [BR:lww00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102729200
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102729200
NCBI-ProteinID: XP_006749495
UniProt: A0A2U3Z0H4
LinkDB
Position
Unknown
AA seq 863 aa
MGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQ
GTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDK
GDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQTGPTGDKGSRGDPGTPGVPGKDGQAGHP
GQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGEKGAK
GEKGQVGLPGIGIPGRPGDKGDQGVAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGSVG
YPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGSPGPTGPAGQKGEPGSDGIPGSAGEKG
EAGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGSKGEQGFMGPPGPQGQPGLPGA
PGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPGLDGLKGDKGNPGWPGTPGAPGPKGEP
GFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKGLPGLQGAKGDQGDQGFPGSKGLPGPP
GPPGPYDVIKGEPGLPGPEGPAGLKGLPGPPGPKGQQGVTGSVGLPGPPGVPGFDGAPGQ
KGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTTDDPQCPPGTKI
LYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTP
EPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAVHSQTIQIPQCPSGWSSLWIGYSFVMH
TSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERSEMFKKPT
PSTLKAGELRTHVSRCQVCMRRT
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgggcccccctggaggacagggaccaccaggatcctcaggccctcctggagtgaaagga
gagaagggctttcccggatttccaggcctggacatgccaggtcccaaaggagataaaggg
tcccaagggctgcctggcctgacgggacagtcggggctccctggtctccctggacagcag
ggcacacctggggttcctgggtttccaggtcccaagggagagatgggcgtcatggggacc
ccggggcagcctggctcaccgggaccagcgggcctgccgggattaccaggagagaaaggg
gaccatggcttcccgggctcctcggggcccaggggagaccctggcttcaagggggacaaa
ggagatgtgggtctccccggcaagcctggctccatggataaggtggacatgggcagcatg
aagggtcagaagggagaccaaggagagaaaggacagactggaccaactggtgataaagga
tcccggggagaccctggaaccccgggagtacctggaaaggacgggcaggcggggcatcct
gggcagccaggacctaaaggtgacccaggcataggtggaaccccaggtgctccgggactc
cctggacccaaaggatcggttggtggcatgggcctgccaggaacaccgggagaaaaaggt
gtgcctggaatccccggcccgcagggcgtccctggcttacccggggagaaaggagccaaa
ggagagaaagggcaggtgggcctacctggcattggaattccgggccgtcctggggacaag
ggagatcaaggggtcgcaggctttccggggagtcctggagagaaaggagaaaaaggcagt
gctggtatcccaggggtccctggctccccaggccccaaaggctcgccagggagtgtcggc
tatccaggaagccccggattgcctggagaaaaaggtgacaaaggtctcccgggatcggat
ggcattcctggcatcaaaggagaagcaggtcttcctgggagtcctggccccacgggccca
gctggccagaaaggggagcccggcagtgacggaatcccggggtcggcgggagagaagggt
gaagcaggtctgcccgggagaggattcccagggtttccaggagccaaaggagagaaaggt
tcaaagggcgacgtgggtttcccaggacaagccgggagtccaggcatccccggatccaaa
ggagagcaaggattcatgggtcccccggggccacaaggacagccgggcttacctggagct
ccgggccacgctgtggaggggcccaaaggagaccggggcccacagggtcaacctggcctg
ccagggcttccaggacctgtggggcctccggggctccctgggcttgatggactcaaaggt
gacaaaggaaacccgggctggccggggactcccggagctccagggcccaagggagagcca
ggattccaaggcctgcctgggattggtggctcgccagggatcacaggttctaagggtgac
atggggcctccaggagtgccaggatttcaaggtcagaaaggcctccctggcctgcaggga
gcgaagggggatcaaggtgaccagggcttccccggaagtaaaggccttcccggccccccg
ggtcccccgggaccctacgatgtcatcaaaggggagccagggcttcctggtcctgagggt
cccgcaggtctgaaggggctcccggggcctccaggccccaaaggacagcaaggtgtgaca
ggatccgtgggcttacctggaccgcccggtgttcctggttttgacggcgcccctggccag
aaaggagagacaggacccttcggccctcctggtccgcgagggtttccgggcccgccaggc
cctgatgggttgccaggatccatgggtcccccaggcaccccgtctgttgatcacggcttc
cttgtgaccaggcacagtcagacaacggatgacccacagtgtcctcctgggaccaaaatt
ctttaccacgggtactccttgctctatgtgcaaggcaacgaaagggcccacggccaggac
ttgggcacggctggaagctgcctgcgcaagttcagtacgatgcccttccttttctgcaac
atcaacaatgtgtgtaacttcgcctcccgaaatgactactcctactggttgtccacgcct
gagcccatgcccatgtccatggcgcccatcgccggggacaatatcagaccgtttattagc
aggtgcgcagtgtgtgaggcgcccgccatggtgatggccgtgcacagccagaccattcag
atcccgcagtgccccagcggctggtcctccctctggattggctattccttcgtgatgcac
accagtgctggtgctgaaggttcgggccaagccctcgcgtcccccgggtcttgtctggaa
gagtttaggagcgcgccattcatcgagtgccacggccgtgggacctgcaactactacgcg
aacgcttacagcttttggcttgccaccatcgagagaagcgagatgttcaagaagcccacg
ccatccaccttgaaggccggggagctgcgcacacacgtcagtcgctgccaagtctgtatg
agaagaacgtaa

DBGET integrated database retrieval system