Leptonychotes weddellii (Weddell seal): 102729200
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Entry
102729200 CDS
T08708
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04151
PI3K-Akt signaling pathway
lww04510
Focal adhesion
lww04512
ECM-receptor interaction
lww04820
Cytoskeleton in muscle cells
lww04926
Relaxin signaling pathway
lww04933
AGE-RAGE signaling pathway in diabetic complications
lww04974
Protein digestion and absorption
lww05146
Amoebiasis
lww05165
Human papillomavirus infection
lww05200
Pathways in cancer
lww05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102729200
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102729200
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102729200
09142 Cell motility
04820 Cytoskeleton in muscle cells
102729200
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102729200
09154 Digestive system
04974 Protein digestion and absorption
102729200
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102729200
09162 Cancer: specific types
05222 Small cell lung cancer
102729200
09172 Infectious disease: viral
05165 Human papillomavirus infection
102729200
09174 Infectious disease: parasitic
05146 Amoebiasis
102729200
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102729200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lww04147
]
102729200
00536 Glycosaminoglycan binding proteins [BR:
lww00536
]
102729200
Exosome [BR:
lww04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102729200
Glycosaminoglycan binding proteins [BR:
lww00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102729200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102729200
NCBI-ProteinID:
XP_006749495
UniProt:
A0A2U3Z0H4
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQ
GTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPGLPGEKGDHGFPGSSGPRGDPGFKGDK
GDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQTGPTGDKGSRGDPGTPGVPGKDGQAGHP
GQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGVPGLPGEKGAK
GEKGQVGLPGIGIPGRPGDKGDQGVAGFPGSPGEKGEKGSAGIPGVPGSPGPKGSPGSVG
YPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGSPGPTGPAGQKGEPGSDGIPGSAGEKG
EAGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSPGIPGSKGEQGFMGPPGPQGQPGLPGA
PGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPGLDGLKGDKGNPGWPGTPGAPGPKGEP
GFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKGLPGLQGAKGDQGDQGFPGSKGLPGPP
GPPGPYDVIKGEPGLPGPEGPAGLKGLPGPPGPKGQQGVTGSVGLPGPPGVPGFDGAPGQ
KGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTTDDPQCPPGTKI
LYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTP
EPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAVHSQTIQIPQCPSGWSSLWIGYSFVMH
TSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERSEMFKKPT
PSTLKAGELRTHVSRCQVCMRRT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccctggaggacagggaccaccaggatcctcaggccctcctggagtgaaagga
gagaagggctttcccggatttccaggcctggacatgccaggtcccaaaggagataaaggg
tcccaagggctgcctggcctgacgggacagtcggggctccctggtctccctggacagcag
ggcacacctggggttcctgggtttccaggtcccaagggagagatgggcgtcatggggacc
ccggggcagcctggctcaccgggaccagcgggcctgccgggattaccaggagagaaaggg
gaccatggcttcccgggctcctcggggcccaggggagaccctggcttcaagggggacaaa
ggagatgtgggtctccccggcaagcctggctccatggataaggtggacatgggcagcatg
aagggtcagaagggagaccaaggagagaaaggacagactggaccaactggtgataaagga
tcccggggagaccctggaaccccgggagtacctggaaaggacgggcaggcggggcatcct
gggcagccaggacctaaaggtgacccaggcataggtggaaccccaggtgctccgggactc
cctggacccaaaggatcggttggtggcatgggcctgccaggaacaccgggagaaaaaggt
gtgcctggaatccccggcccgcagggcgtccctggcttacccggggagaaaggagccaaa
ggagagaaagggcaggtgggcctacctggcattggaattccgggccgtcctggggacaag
ggagatcaaggggtcgcaggctttccggggagtcctggagagaaaggagaaaaaggcagt
gctggtatcccaggggtccctggctccccaggccccaaaggctcgccagggagtgtcggc
tatccaggaagccccggattgcctggagaaaaaggtgacaaaggtctcccgggatcggat
ggcattcctggcatcaaaggagaagcaggtcttcctgggagtcctggccccacgggccca
gctggccagaaaggggagcccggcagtgacggaatcccggggtcggcgggagagaagggt
gaagcaggtctgcccgggagaggattcccagggtttccaggagccaaaggagagaaaggt
tcaaagggcgacgtgggtttcccaggacaagccgggagtccaggcatccccggatccaaa
ggagagcaaggattcatgggtcccccggggccacaaggacagccgggcttacctggagct
ccgggccacgctgtggaggggcccaaaggagaccggggcccacagggtcaacctggcctg
ccagggcttccaggacctgtggggcctccggggctccctgggcttgatggactcaaaggt
gacaaaggaaacccgggctggccggggactcccggagctccagggcccaagggagagcca
ggattccaaggcctgcctgggattggtggctcgccagggatcacaggttctaagggtgac
atggggcctccaggagtgccaggatttcaaggtcagaaaggcctccctggcctgcaggga
gcgaagggggatcaaggtgaccagggcttccccggaagtaaaggccttcccggccccccg
ggtcccccgggaccctacgatgtcatcaaaggggagccagggcttcctggtcctgagggt
cccgcaggtctgaaggggctcccggggcctccaggccccaaaggacagcaaggtgtgaca
ggatccgtgggcttacctggaccgcccggtgttcctggttttgacggcgcccctggccag
aaaggagagacaggacccttcggccctcctggtccgcgagggtttccgggcccgccaggc
cctgatgggttgccaggatccatgggtcccccaggcaccccgtctgttgatcacggcttc
cttgtgaccaggcacagtcagacaacggatgacccacagtgtcctcctgggaccaaaatt
ctttaccacgggtactccttgctctatgtgcaaggcaacgaaagggcccacggccaggac
ttgggcacggctggaagctgcctgcgcaagttcagtacgatgcccttccttttctgcaac
atcaacaatgtgtgtaacttcgcctcccgaaatgactactcctactggttgtccacgcct
gagcccatgcccatgtccatggcgcccatcgccggggacaatatcagaccgtttattagc
aggtgcgcagtgtgtgaggcgcccgccatggtgatggccgtgcacagccagaccattcag
atcccgcagtgccccagcggctggtcctccctctggattggctattccttcgtgatgcac
accagtgctggtgctgaaggttcgggccaagccctcgcgtcccccgggtcttgtctggaa
gagtttaggagcgcgccattcatcgagtgccacggccgtgggacctgcaactactacgcg
aacgcttacagcttttggcttgccaccatcgagagaagcgagatgttcaagaagcccacg
ccatccaccttgaaggccggggagctgcgcacacacgtcagtcgctgccaagtctgtatg
agaagaacgtaa
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