Leptonychotes weddellii (Weddell seal): 102749302
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Entry
102749302 CDS
T08708
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102749302 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lww03400
]
102749302 (LIG3)
Enzymes [BR:
lww01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102749302 (LIG3)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102749302 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
102749302
NCBI-ProteinID:
XP_030897585
UniProt:
A0A7F8RWC8
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MTLTFKILFPPTLRTLGRKELCLFRQQHHWPDRRQFSHWSETDLLHGHCLLQRRKPALSF
QEGHLRPRATCLVFLPGAHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKATGTPKKKAVVQAKLTATGQVASPVKGASLVTSSNPRKFSGFSAKPNNSGGA
HSSPPPKASLSSSRCDPKHKDCLFREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTIQEVDEFLLQLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRRRALSVQASLMT
PVQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFAGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKAADLADMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPGWLKVNKIYYPDFIVPDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFT
VAAGEEGSSTTGGSSGENGGTSGPVGVRKASRASPKQPSTGARKAGGRLSGPSSRGGQQL
TLKAGQKRKAPEETPCPAKRRPASPQSRRRAVPAGGS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgactttgactttcaagatcctcttcccaccaaccctccgcacacttgggcgaaaagaa
ctgtgcctattccgacagcaacatcactggcctgacagaagacagttcagccattggtca
gaaacagatctgcttcatgggcactgcctcctccagagaagaaagcctgctctgtcattc
caggaaggccatctaagaccacgtgccacctgccttgttttcttgccaggggcgcatgtg
ggactctgcagtggcccctgtgagatggccgagcaacgattctgtgtggactatgctaag
cgcggcacggcgggctgcaaaaagtgcaaggaaaagattgtgaagggggtgtgccggatc
ggcaaagtggtgcccaaccccttttcagagtccgggggtgatatgaaagagtggtatcac
attaaatgcatgtttgagaaactggagcgggcccgggctaccacaaaaaaaatcgaggac
ctcacagagctagaaggctgggaagagctggaagacaatgagaaggaacagataagccag
cacattgcagatctgtcttctaaggcaacgggcacaccaaagaagaaagccgtcgtccag
gctaagctgacagccactggccaggtggcctctccagtgaaaggtgcctcacttgtcacc
agtagcaatccccggaaattttctggtttttcagccaagcccaacaactctgggggagcc
cactcaagccctccccctaaggcaagtctgtcctcaagcagatgtgaccccaagcacaag
gattgtctgtttcgcgagtttcggaagttgtgtgccatggtggctgagaatcctagctac
aacacgaagacccagatcatccaggactttcttcggaaaggttcagcaggagatggtttc
cacggcgacgtgtacctgacagtgaagttgctgctgccaggtgttattaagagtgtttac
aacttgaatgataagcagatcgtgaagcttttcagccgcattttcaactgcaacccagat
gatatggcacgagacctagagcagggcgacgtgtcagagacaatcagagtcttctttgag
cagagcaagtctttccccccagctgccaagagcctccttactatccaggaggtggacgaa
ttcctccttcagctctccaggctcaccaaggaggatgagcagcaacaggctctgcaggac
atcgcctccaggtgtacagccaatgacctcaagtgcatcatcaggttgatcaaacatgat
ctgaagatgaactcaggtgcaaagcacgtgttagatgcccttgaccccaatgcctatgaa
gccttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctccgcaatgagcag
gaggtggagaaggagccaggccggagacgagctctgagcgtccaggcttccctgatgacg
ccagtgcagcccatgctggccgaggcctgcaagtccatcgagcacgcaatgaagaagtgt
cctaacggcatgttctctgagatcaagtacgatggggagcgagtgcaggtgcataagaag
ggggaccacttcagctacttcagccgcagcctcaagcctgtcctgcctcacaaggtggcc
cacttcaaggactacatcccccaggctttcgccgggggccacagcatgatcttggactct
gaggtgctcctgattgacacgaagacaggcaaaccgctgccctttgggactctgggagtg
cacaagaaagctgccttccaggatgctaatgtttgcctatttgtttttgattgtatctac
ttcaatgatgtcagcttgatggacaggcctttgtgtgagcggcggaagtttcttcatgat
aacatggttgaaattcccaaccggatcatgttctcagaaatgaaacaagtcactaaagct
gcggacttggccgacatgataaaccgggtcatccgagaggggctggaagggctggtgctg
aaggacgtgaagggtacatatgagcctggaaagcggcactggctgaaggtgaaaaaagac
tatttgaacgagggggccatggcggacacagctgacctggtggtccttggggccttctat
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccaagc
agccagaagtggtgcacagtcaccaagtgttcgggaggccacgatgatgcgacccttgcc
cgcctgcagaaggaactggacatggtgaagatcagcaaggatcccagcaagatacccggc
tggctgaaagtcaacaagatctactatcctgacttcatagtcccagacccaaagaaagct
gccgtgtgggagatcacgggggccgagttctccaagtctgaggcgcacacggccgacggg
atctccatccgcttcccacgttgcacccgcatccgtgatgataaggactggaagtctgcc
actaacctcccccagctcaaggaactgtaccagctgtccaaggagagggccgacttcacc
gtggcggccggagaggaggggagctccaccaccgggggcagcagcggagagaacgggggt
acctcagggcctgtgggggttcgcaaggcctccagggcctccccgaagcagccctccacc
ggcgccaggaaggcaggagggaggctgagtggccccagcagcagaggcggccagcagctg
accttgaaggcaggccagaagcggaaggcccccgaggagaccccgtgcccagccaagagg
cggccggccagcccgcagagccgaaggagagccgtgccagcgggcgggagctag
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integrated database retrieval system
