Leifsonia xyli subsp. xyli CTCB07: Lxx10770
Help
Entry
Lxx10770 CDS
T00190
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lxx10770 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx10770 (ruvB)
Enzymes [BR:
lxx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lxx10770 (ruvB)
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lxx10770 (ruvB)
RecFOR pathway proteins
Lxx10770 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
AAA_22
MCM
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
DUF815
Sigma54_activ_2
AAA_3
AAA_25
NB-ARC
NTPase_1
Zeta_toxin
Rad17
AAA_19
AAA_33
AAA_18
AAA_24
Resolvase
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AAT88931
UniProt:
Q6AFB4
LinkDB
All DBs
Position
1099889..1100932
Genome browser
AA seq
347 aa
AA seq
DB search
MSDDPTTPELESESESELAFEGALRPRTLAEFVGQAKVRGQLQLLLTAARMQERTADHIL
LAGPPGLGKTTLAMIVAHESDRPLRLSSGPAIQHAGDLAALLSSLTPGEVLFIDEIHRMA
RTAEEMLYLAMEDFRIDIMVGKGAGATSIPLDLAPFTLVGATTRSGLLPNPLRDRFGFTA
HLEFYDEGELAQVLARAAVMLEFEIDGEALAEIAGRCRGTPRIANRLLRRVRDYALVHGG
RADIAAVHAALELYDVNELGLDRLDRAVLHAILERFEGGPVGLNTLAVSVGEEPETIESV
VEPFLVRIGLLSRTPRGRVATVAAWRHFGLAAPRQGHSQPPSLMDDL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgatccgaccacccccgagctcgagtccgagtccgagtcggagctcgccttc
gagggcgccctccgcccgcggacgctggccgagttcgtcggccaggccaaggtccgcggc
cagttgcagctgctgctgaccgccgcccgcatgcaggaacgcaccgccgaccacatcctg
ctcgccgggccgcccggcctcggcaagaccaccctcgcgatgatcgtggcccacgagagc
gaccggccgttgcgcctctccagcggccctgccatccagcacgccggggacctcgccgcg
ctgctctcctcgctcaccccgggcgaggtgcttttcatcgacgagattcaccggatggcc
cgcaccgccgaagagatgctctatctggcgatggaggacttccgcatcgacatcatggtc
ggcaagggcgcgggcgcgacgtccatccccctcgacctggcgcccttcacgctcgtcggc
gcgacgacccgttcggggctgctcccgaatccgctccgggaccgcttcggtttcaccgcc
cacctcgagttctacgacgagggcgagctcgcgcaggtcctcgcgcgcgccgccgtcatg
ctcgagttcgagatcgacggggaggccctcgccgagatcgccggccgctgccggggcact
ccgcgcatcgccaaccgcctgctccgccgtgtgcgcgactacgccctcgtccacggcggg
cgagccgacatcgccgctgtccacgccgcactggagctgtacgacgttaacgagctcggg
ctcgaccggctcgaccgcgccgtgctgcacgcgatcctggagcgcttcgaggggggaccg
gtgggcctgaacactctggcggtctccgtcggggaggagccggagacgatcgaatcggtg
gtcgagcccttcctcgtccgcatcggactgctctcgcggacgccgcgcgggcgggtggcg
accgtcgccgcctggcgccatttcggcctcgcggctccccggcaaggacactcacagcct
ccatcactgatggatgacttataa
DBGET
integrated database retrieval system
