Lysobacter yananisis: RDV84_06435
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Entry
RDV84_06435 CDS
T09342
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
lya
Lysobacter yananisis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
MmcB-like
DUF4585
PSK_trans_fac
OCRE
Motif
Other DBs
NCBI-ProteinID:
WMT04463
UniProt:
A0AA51SH44
LinkDB
All DBs
Position
complement(1512191..1516927)
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AA seq
1578 aa
AA seq
DB search
MTVSASVALGAARSGTRTAAMEVVREPASQGYQIPNPDVSGADRLNNGALDFLESEGFNN
TVMVAQTGFGMYTAGAASAATVTAAGGTLGAAATAAAVSAASVLGITAIGIGSFMLGNYL
GDKAADAVFGDLLGMKKIATEGDMPARMGDPIAHVNKNLGLLGALVGAALVIAVGVATCG
AGLVVMAAAVAVAGVAGGAIAGFASKAGQYGANKGAIMLGSLNVFFEGRPVARVGDPVMC
SDHPGPMVLAEGARTVYANNRNIVRIGHRTTCDANVNDGCKTIVETMETAQVFEIKDSRS
PYLRWANVITNLLPLPRKGRRGAPEHGPGRPPHAEPATKSGEGSGCSPSQCTKPGEPVDV
GSGDFIQEWPVLDLPGTIPLRLERLYRSTAAFAGGFGDKWADTWSQRLELGEQTVTYHTE
FGTTLVFHTPDDEVEAMNLRQARYLLFGRRSQALRLYDRQTRLVYSFEAADGRLRRLSDI
EDRNGNRIGFLYQDGGLRAIEHSDGYRLDVRQEQGRLRSVRFAGGEFDGLELLRCDYADS
GQVGDCASYQFGRLFHEYDRAGRMIHWRDTRATQAWIDYDALGRAVATRTAGGHYDDRFE
YLDAEACTVYRDAEGGVTRYYYNRDGLVERMIDPLGHEWLTEWDEWTHKQSETDPLGRTL
RYHYNDFDEVIQVDLPDGRSQRYEYAGDGSLHAAQAEDGGRWEFQHDGRGNLIGAIDPLG
RRTGYRIGANGEVLRQDNPDGTQLRYGYDRHLRLDEAVRADGTRLRLRHDAFGRVTEAID
ALGHITRYEYAADHAHPRGSLSRAVLDDGSAQEIGYDSELLAVRYRDGEGRQTHRRYGPF
DLLEEIAFPAGNAIRLEYDKLTRLTAVVNGVGERYRYEYDALGRLVGETDYSGIVTRYAY
NAVGWLIETRRHDGSRVAYENDPRSGRLLAIRRHAADATDADSDDTEIGYDEQGRLTSVR
NRDCLVEYERDAHGRVIAERIDGREVRLSYDADTGALAAMAAGPRSLQWQYDLNGALAAL
GTDGHAPLRIARDALGRDVRWHSEAGFELRQQFNALNLLTGQIAGRAESVPDPRAPASSA
PSLPPQVQRGYRYDRAFNPIHIDDRRWGASRYRYDANGQVTGGRFDASRWAPALDEGFDY
DGAFNLINRTLSNLPGVERQSLRQDGGRVVRRGRSEYRYDALGRLVEKTEHRDGFRPQHW
RYRWDHDSRLVELTTPQGERWRYAYDGLGRRIRKFKSLPGGRIAGAVATHAAGGVPSGPS
SSAAAAANGADQRGDDGRHAPQIIGEQYQWSFDQLIEAAPIYADGTVAYDRAVQWDYAPG
AVVPMAQRRGGKRWYVVSDHIGTPRELLDETGEVVWSNQPEVWGRQRLWQRNAANDDAVD
CPIRFPGQYFDAESGLHYNRHRYYDPDTGQYLSPDPLGLEGGHRPQAYVGNPNGWIDPLG
LAACPVRVVNDTKIHGTGQVDRTPGHNQFSEVIANKLAMSGKFTDIYLNRAYNTHTGGGV
SRRRPDIMAVDHNGKIHAIEIASRTDMRSNTFWNFLTSRNQTAMSNLPVGQRGDIISIRH
PYKATRIKSDLDNWLNGL
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtcggcttctgtcgcgcttggcgccgcacgcagcggtacccggacggcggcg
atggaggtggtgcgcgagcccgcttcgcagggctaccagatacccaaccccgatgtcagc
ggcgccgaccggctcaacaacggcgcgctcgacttcctggaaagcgaaggcttcaacaac
accgtcatggtcgcgcagaccggcttcggcatgtacaccgcgggcgcggccagcgcggct
acggtgaccgcggccggcggcaccctgggcgccgccgcgaccgctgccgcggtgtcggcg
gcttcggtgctcggcatcaccgcgatcggcatcggcagtttcatgctcggcaattacctc
ggcgacaaggccgcggacgcggtgttcggcgacctgctggggatgaagaagatcgccacc
gaaggcgacatgcccgcacgcatgggcgatcccatcgcccacgtcaacaagaatctcggc
ctgctgggcgcgctggtcggcgcggcgctggtgatcgcggtcggcgtggcgacctgcggc
gccggcctggtggtgatggccgcggcggtcgccgtcgctggcgtggccggcggcgccatc
gctggtttcgcgtccaaagccgggcagtacggcgccaacaagggcgcgatcatgctgggc
tcgctcaatgtcttcttcgagggacgtccggtggcgcgggtgggcgatccggtgatgtgc
tccgaccaccccgggccgatggtgctggccgagggcgcacgcaccgtctacgccaacaac
cgcaacatcgtccgcatcggccaccgcaccacctgcgatgccaacgtcaacgacggctgc
aagaccatcgtggagacgatggaaaccgcgcaggtgttcgagatcaaggacagccgctcg
ccgtatctgcgctgggccaacgtcatcaccaacctgctgccgctgccgcgcaagggccgg
cgcggcgcgccggagcacgggccgggccggccgccgcacgccgaaccggcgaccaaatcc
ggcgagggcagcggttgttcgccttcgcaatgcaccaagcccggcgagccggtcgacgtg
ggcagcggcgacttcatccaggaatggccggtgctggacctgccgggtacgatcccgctg
cgactcgagcgcctgtaccgctccaccgccgcgttcgccggcggcttcggcgacaagtgg
gccgacacctggtcgcagcggctggagttgggcgagcagaccgtcacctaccacaccgag
ttcggcaccaccctggtgttccacacgcccgacgacgaagtcgaggcgatgaacctgcgc
caggcgcgttacctgctgttcgggcgccgctcgcaggctctgcgcctgtacgaccgccag
acccggttggtctacagcttcgaagcggccgatggccggctgcgccgcctcagcgacatc
gaggaccgcaacggcaaccgtatcggtttcctctaccaggacggcggactgcgcgcgatc
gagcacagcgacggctaccggctggacgtgcgccaggaacagggacggctgcgttcggtg
cggttcgccggcggcgagttcgacggcctggaactgctgcgctgcgactacgccgattcg
ggccaggtcggcgactgcgccagctaccaattcgggcggctgttccacgagtacgaccgc
gccggccgcatgatccactggcgcgatacccgcgccacccaggcttggatcgactacgac
gcgctcggccgcgccgtcgccacccgcaccgcgggcgggcactacgacgatcgcttcgaa
tacctcgatgccgaggcgtgcacggtctaccgtgatgccgagggcggcgtcacccgctac
tactacaaccgcgacggcctggtcgagcgcatgatcgacccgctcgggcacgaatggctg
accgagtgggacgagtggacccacaagcagtccgagaccgacccgctgggacgcacattg
cgttaccactacaacgatttcgacgaagtgatccaggtcgacctgcccgacggacgcagc
cagcgctatgaatacgccggcgacggttcgctgcatgcggcgcaggccgaggacggcggt
cgctgggagttccagcacgacgggcgtggcaacctgatcggcgcgatcgatccgctcggc
cggcgcaccggataccgaatcggcgcgaacggcgaagtgctgcgccaggacaatcccgac
ggcacccagctgcgctacggttacgatcgccacctgcgtctggacgaggcggtacgcgcc
gacggcacccggctgcgtctgcgtcacgacgccttcggccgggtcaccgaggccatcgac
gcgctcggccacatcacccgctacgaatacgccgccgatcacgcccacccgcgcggttcg
ctgagccgcgcggtgctcgacgacggcagcgcgcaggagatcggctacgacagcgaactg
ctggccgtgcgttaccgcgacggcgaaggccggcagacccaccgccgctacgggccgttc
gacctgctggaggagatcgccttccccgcaggcaacgccattcgcctggagtacgacaag
ctgacccgcctgaccgctgtggtcaatggcgtcggcgagcgttaccgctacgagtacgat
gcgctcgggcggctggtcggcgagaccgactacagcggcatcgtcacccgttacgcctac
aacgcggtcggctggctgatcgaaacccgtcgtcacgatggctcgcgcgtggcttacgag
aacgacccgcgcagcggccggttgttggctatacgccggcacgccgccgatgcgaccgat
gcggacagcgacgacaccgagatcggctacgacgaacaggggcggctgaccagcgtgcgc
aatcgcgactgcttggtcgaatacgagcgcgacgcgcacgggcgggtgatcgccgagcgc
atcgacggacgcgaagtgcggctgagctacgacgccgataccggcgcgctggcggcgatg
gccgccggcccgcgcagcctgcagtggcaatacgacctcaacggcgcgctggccgcgctc
ggcacggacgggcacgcgccgttgcggatcgcacgcgatgcgctcgggcgcgacgtgcgc
tggcacagcgaagccggcttcgaactgcggcagcaattcaacgcgctgaacctgctgacc
ggccagatcgccggtcgcgccgagtcggttcccgacccgcgcgcgccggcttcatcggcg
ccatcgttgccgccccaggtgcaacgcggctaccgttacgaccgcgccttcaatccgata
cacatcgacgaccggcgctggggcgcgagccgctatcgctacgacgccaacggccaggtg
accggcggccgtttcgacgccagccgctgggcgccggcgctggacgagggtttcgactac
gacggcgcgttcaacctgatcaaccgtaccctgtccaacctgcccggcgtagaacggcag
agcctgcgccaggacggcggccgggtggtgcggcgcggccgcagcgaataccgctacgac
gcgctcggccggctggtcgaaaagaccgaacaccgcgacggcttccgaccgcaacattgg
cgttatcgctgggaccacgacagccgcctggtcgaactgaccacaccgcagggcgagcgc
tggcgctatgcctacgacggcttgggccggcgcatccgcaagttcaagtcgctgccgggc
ggccgtatcgccggcgccgtggcgacccatgcagcaggtggcgtaccgagcggtccgtcg
tcgtctgccgcggccgccgcgaacggcgcagaccaacgcggcgacgacggacgccacgcg
ccccagatcatcggcgagcaataccaatggagcttcgaccagctgatcgaagccgcaccg
atctacgccgacggcaccgtcgcctacgaccgcgccgtgcaatgggactacgcccccggc
gccgtcgtgccgatggcccagcgccgcggcggcaaacgctggtacgtggtgtccgaccac
atcggcaccccgcgcgaactgctcgacgaaaccggcgaagtcgtctggtccaaccaacct
gaggtatggggccggcagcggctatggcagcgcaacgccgcaaacgacgatgccgtggac
tgcccgatccggtttccggggcagtacttcgatgcggagagcgggctgcattacaaccgg
catcggtactacgatccggacacggggcagtatttgagtccggatccgttggggttggag
ggcggtcaccgcccgcaggcttatgtcggaaatcccaatggctggatcgatccactcggt
ctggcggcctgtccggtacgcgtcgtcaacgatacgaagatacacggcacagggcaggtg
gatcgcactcctggacataaccagttttcggaggtcatagcgaacaagctggcgatgtcg
ggaaagttcaccgatatctacttgaacagggcgtacaacacccataccggaggtggcgta
tccagaaggcggccggacatcatggccgtcgatcacaatggcaagattcatgcgatagag
atcgcgtctaggacggatatgagatccaataccttctggaacttcctgacatcgcgcaat
caaactgcgatgtcgaatctgcccgttggtcaaagaggtgacatcatctcgatccgacat
ccttacaaggcaactcggataaaatccgatctggacaattggctgaacggattgtga
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