Lysobacter yananisis: RDV84_10245
Help
Entry
RDV84_10245 CDS
T09342
Name
(GenBank) autotransporter-associated beta strand repeat-containing protein
Organism
lya
Lysobacter yananisis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
WMT05198
UniProt:
A0AA51SIF4
LinkDB
All DBs
Position
2433672..2441549
Genome browser
AA seq
2625 aa
AA seq
DB search
MSARAQRRLRFHPLSLGVAQAIPLLLALQFYSGSAAAACTPAVPTDGATVSCTGVPILLP
PNPNSFLSNANNLNATVQSGAIMSTLPGGTAMTFGGNGLNLTNLGAIDANAFGSLVLARG
LMVGNTVVPAAGNVVIDNQGLIEGTFDGTFGLGGSAMVVANTGTTTITNSGTIGMSALGL
FDPINSIAVGIYGGGNVNFTNTGTITGRVAFSSPTAGGNTFVNVGTINGSVSLGTTLSND
TFVAVTGSSINGGLVPLPGVTIPTLSIPPSFLTYAAGGTVDAGIGGSDTLVLQNTAAGPG
SGNGGAGTISAAQYLNFENLTLNSGTWTLQGAVVSGSATLNGGTAIFDNALSFGTGTLTG
NGGAIQASVGGLTLGQNVNLTGGLIVQGGNNLTLGGTVSGAGGLIKNGAGTLTLAGNNNF
NGGLALNGGGLTLGTANSLGTGLFLVGGPAQLNTAFTGTLTNQVQLNGALTLNGAGTLTL
GGNINGAGSLTLASGNLALTGANNYTGGTILQAGSLHLGNSGAIGAGALTVNGAASLAGA
AGVALGNNVVLNNTLNFGAGGGALTLNGTISGAGGISMAGVPGLTLNGANNFAGGFNLGG
GALTVGNNLALGTGAVTVSGAGSLASNAGVGLANNFNLNAGLSIGGASNLALNGTINGLG
GLTKNGAGNLTLGGANNFAGGFNLLGGGLTVGTNTSLGLGALTVNGAATLNANAGVNLGN
AVVLNAGLGIGGGNDIALGGIVSGGGGLSYNGTGTLALNGANNFGGGVNLAGGTLSVGNN
LALGLGGLNVAGNANLNAGVPGINLGNGVTLGAGATLGLGGANSLGLGGAIGGGGGLSIN
GAGTFTLGGANTFGGGVNLAAGNLLLGTDTSLGAGALNVGGNASLASTGAALNLGNAINL
GSGVGLTVGGAANLSLGGGINGGGSLVKTGAGTLALNGVNGFTGGVSLQSGTLSLGNASA
LGIGALSVDGAASLNAGAAMTLGNAINLNAGLSLGGGVDLSLNGAIGGSGGLSFNGPATL
SLNGNNNFGGGLALGGGSLSVGSNTALGTGALNVGGSASLSAGLPGVALGNAVNLGAGAT
LGIGGGNSLSLGGTIGGAGGLAMNGGGTLTLSGANNFGGGVALNAGTLGVGNNLALGTGA
LNVGANAALTATAPGIALGNAVNLGTGATLAIGGGNDLALGGTIGGGGGLGFNGTGTLAL
NGANTFGGGVALGGGTLSVGNNLALGSGTLSVGASAGLTAGAPGIALGNNIDVGAGAVLG
LTGANALNLGGDIGGGGGLSINGAGDFTLTGNNSFGGGVALGAGNLLLGGSASLGTGTLA
VTGNASLASTGAALNLGNAVNLGAGAALSLGGAADLTLGGAIDGGGSLIKTGAGALTLNG
NNSFGGGLNLQAGTLNVGSDTALGTGTLGVNGAATLNAGAAANLANAIDLNAALAIGGGA
NLGLNGAIGGSGGISFNGPSTLTLGGANSFGGGVALGGGTLGVGTSTALGTGALNVGGSA
NLSASAAGVNLGNAVNLGAGVVLGVTGGNDLALGGSIGGSGGLAMNGSGALNLGGANNFG
GGVALNAGSLGVGSNTALGTGALNVGGSAGLSAIAPGIALGNAVTLGAGAQLGIGGGNDL
SLGGVIDGAGSLGFNGSGTLALSAANTFAGGVNLNAGTLSLGNNAALGTGALNIGGNAAL
TSALPGLALANAVNLAAGSALNLNGNNSLDFNGTVSGSGTLVKNGSGALGLNGQVVGFSG
GLSIQGGTLNVANAITAGLASAAGTTANFSGGADSLTVTGAVAGAVNLGAGNDSLTSSLA
NLAGLTGAINAGAGSDTFAVNGSGDGVLPAAGLSGFENLSLAPGGTLVLPGGASGAFADS
SIGGNLVLDGNLGGNASVAAGGGLIGDGALAGALTLGGTLAPSGLAGASGAAAGTGAVGA
SLNVASLTVNPGATLQVRQNGGGATDSVVVAGNAAINGGQVVAIPQAGSYAPVTDYRILD
ASSLSGAFTGVSQTALPFLDAALFVQGNDVFLRLSEHDAGGTGIRFNQFPGLSANQQAVA
NALQAIADRNSGQLPTLIAAARGLSAAQAPRAFDTLNGETYASIASAQRYNAEQLQRSVA
RQLDLARDNGVDEDSTLGTLWATAYGGRAEFDGERLAGIDNTVGGLAIGLEGSPGAHFRF
GGHIGMAHSKMETDRRDDKVDGDLFNVGIHWLYAPGAFWTQGAAGYSYGSFDAEREIAVG
VYNRRTQAHFSNDGAYAMLEAGWRWDGASVRIEPLLGVYYNKVESVSFRERGAGDADLLV
SVASYDTTTAGVGVRFSGAPGNGARKWSPTADIRYLHDLQDDRPYARNAFAGASVPGFAT
TGFAAERNRWNVGLGLQYRMGPASSGFLEYRGDLGSDDRAHSLNLGLRLGWGATPAMAAA
RAAPMATPTAAGWAAQGASAPGAAATDSGSGSNSSSSSSASTKAAGAAAAGAAAAADPAA
ASAPGAGSGSGSTRGAAAVAATAGSNAAGFNAAGSNTAGSSAASTNAASATSSDPSRAGA
LAAAGGGAAATAADAKVGSGSAGFGQCKLRPAAKAAPARPLAKAKHGGARPISKSKRVAS
RGTGSKAKPRRPATRLAAATPRSVPPSGAVTQPTTWCDEASARTP
NT seq
7878 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcgcgcgcaacgtcgtcttcgcttccatccgctcagcctcggcgtcgcccag
gcgatcccgttgttgctggccctgcagttctacagcggcagcgccgccgcggcgtgcacc
ccggcggtgccgaccgatggcgccacggtcagctgcaccggcgtgccgatcctgctgccg
ccgaatccgaattcgttcctgagcaacgccaacaacctcaacgcgaccgtgcagagcggc
gcgatcatgagcacgttgccgggcggcaccgcgatgaccttcggcggcaacggcctgaac
ctcaccaacctcggcgcgatcgacgccaacgccttcggttcgctggtgctggcgcgcggg
ctgatggtcggcaataccgtcgtgcccgcagccggcaacgtcgtgatcgacaaccagggt
ctgatcgaaggcaccttcgacggcaccttcggcctcggcggttcggcgatggtggtggcc
aacaccggcaccaccacgatcaccaactccggcaccatcggcatgagcgcgctgggcctg
ttcgatccgatcaactcgatcgcggtcggcatctacggcggcggcaacgtcaacttcacc
aacactggcaccatcaccgggcgggtcgcgttctccagcccgaccgccggcggcaacacc
ttcgtcaacgtcggcaccatcaacggcagcgtctcgctcggcaccacgttgagcaacgac
accttcgtcgcggtgaccggttcgagcatcaacggcggcctggtgccgctgccgggcgtg
accatcccgacgctgtcgatcccgccgagcttcctgacctacgccgccggcggcacggtc
gacgccggcatcggcggcagcgacaccctggtgctgcagaacaccgccgccggaccgggc
tcgggcaacggcggcgccggcacgatctcggcggcgcagtacctcaacttcgagaacctg
accctcaacagcggcacctggaccctgcagggcgcggtggtcagcggcagcgccacgctc
aacggcggcaccgcgatcttcgacaatgcgctgtcgttcggcaccggcacgctgaccggc
aacggcggcgcgatccaggcctcggtcggcggcctgaccttggggcagaacgtcaatctc
accggcgggctgatcgtacagggcggcaacaacctcaccctcggcggcaccgtcagcggc
gccggcggcctgatcaagaacggcgccggcacgctgaccctggccggcaacaacaacttc
aacggcggcctcgcgctaaacggcggcggcttgaccctgggcacggccaactcgctcggc
accggcctgttcctggtcggcggaccggcccagctcaataccgcgttcaccggcacgctc
accaaccaggtgcagctcaacggcgcgctgaccctcaacggcgccggcaccctgaccctg
ggcggcaacatcaacggcgccggttcgctgaccctggccagcggcaatctcgccctgacc
ggagccaacaactacaccggcggcaccatcctgcaggccggctcgctgcatctgggcaac
agcggcgcgatcggcgccggcgcgctcactgtcaacggcgccgccagcctcgccggcgcg
gccggagtcgcgctgggcaacaacgtcgtcctcaacaacaccttgaacttcggcgccggc
ggcggcgcgctgaccctcaacggcaccatcagcggcgccggcgggatcagcatggccggc
gtgccggggctgacgctcaacggcgccaacaatttcgccggcggcttcaacctcggcggc
ggcgcgctgaccgtcggcaacaatctcgccctgggcaccggcgcggtcaccgtcagcggc
gccggttcgctggcgtccaacgccggggtcggcctggccaacaacttcaacctcaatgcc
ggcctgtcgatcggcggcgccagcaacctcgccctcaacggcaccatcaacgggctcggc
gggctgaccaagaacggcgccggcaacctcaccctcggcggcgccaacaacttcgccggc
gggttcaacctgctcggcggcggcctgaccgtcggcaccaacacttcgctcgggctcggc
gcgctgaccgtcaacggcgcggccacgctcaacgccaacgccggggtgaacctcggcaac
gcggtggtgctcaacgccgggctcggcatcggcggcggcaacgacatcgccctgggcggg
atcgtcagcggcggcggcgggctcagctacaacggcaccggcacgctcgcgctcaacggc
gccaacaacttcggcggcggggtcaacctcgccggcggcacgctcagcgtcggcaacaat
ctcgcgctcggcctcggcgggctcaacgtcgccggcaatgccaacctcaacgccggcgtg
ccgggcatcaatctgggcaacggcgtcaccctcggcgcgggcgcgacgctgggcctgggc
ggcgccaattcgctcgggctcggcggcgccatcgggggcggcggcggtttgtcgatcaac
ggcgccggcaccttcaccctcggcggcgcgaacacgttcggcggcggcgtgaacctcgcc
gcgggcaacctgttgctgggtaccgacacctcgctcggcgccggcgcgctcaacgtcggc
ggcaacgcctcgctggccagcaccggcgcggccttgaacctgggcaacgcgatcaacctc
ggcagcggcgtggggcttaccgtcggcggcgcggcgaatctcagcctcggcggcggcatc
aacggcggcggttcgctggtcaagaccggcgccggcaccctggccttgaacggcgtcaac
ggtttcaccggcggcgtgagcctgcagtccggcacgttgtcgctcggcaacgcttcggcg
ctgggcatcggcgcgctgtcggtggacggcgcggcctcgctcaacgccggcgcggcgatg
accctgggcaacgcgatcaacctcaacgccgggctgagcctcggcggcggcgtcgacctg
agcttgaacggcgccatcggcggcagcggcgggctgagcttcaacggcccggcgacgctg
agcttgaacggcaacaacaacttcggcggcggcctcgcgctgggcggcggttcgctcagc
gtcggcagcaacaccgcgctgggcaccggcgcgctcaacgtcggcggcagcgccagcctc
agcgcgggcctgcccggcgtcgcgctcggcaacgcggtcaatctcggcgccggcgccacc
ctcggcatcggcggcggcaacagcctgagcctgggcggcaccatcggcggcgccggtggc
ctggcgatgaacggcggcggtaccttgaccttgagcggcgccaacaacttcggcggcggc
gtcgcgctcaacgccggcacgctcggcgtcggcaacaacctcgcgctcggcaccggcgcg
ctcaacgtcggcgcgaacgcggcgctgaccgcgaccgcgccgggcatcgcgctgggcaat
gcggtcaacctcggcaccggcgccacgctcgccatcggcggcggcaacgacctggcgctc
ggcggcacgatcggcggtggcggcgggctcggcttcaacggcaccggcacgctcgcgctc
aacggcgccaataccttcggcggcggcgtcgcgctcggcggcggcacgctcagcgtcggc
aacaatctggcgctgggcagcggcacgctcagcgtcggtgccagcgccgggctcaccgcg
ggcgcgcccggcatcgcgctgggcaacaacatcgatgtcggcgcgggcgcggtgctcggg
ctcaccggcgccaacgcgctcaacctcggcggcgacatcggcggcggcggcggtttgtcg
atcaacggcgccggcgatttcaccctgaccggcaacaacagcttcggcggcggcgtcgcg
ctcggcgccggcaacctgctgctcggcggcagcgcctcgctcggcaccggcacgctcgcg
gtcaccggcaacgccagcctcgccagcaccggcgcggcgctgaacctcggcaatgcggtc
aacctcggtgccggcgcggcgctcagcctcggcggcgcggccgacctgaccctgggcggc
gccatcgacggcggcggttcgctgatcaagaccggcgcaggcgccttgaccctcaacggc
aacaacagcttcggcggcgggctgaacctgcaggccggcacgctcaacgtcggcagcgac
accgcgctgggcaccggcacgctcggcgtcaacggcgcggccacgctcaacgccggcgcg
gccgcgaacctggccaacgccatcgacctcaacgccgcgctcgccatcggcggcggcgcc
aacctcggcttgaacggcgccatcggcggcagcggcgggatcagcttcaacggcccctcg
accctgaccctgggcggcgccaacagcttcggcggcggcgtcgcgctcggcggcggcacc
ctcggcgtcggcaccagcaccgcgctcggcaccggcgcgctcaacgtcggcggcagcgcc
aacctcagcgccagcgcggccggggtgaacctgggcaacgcggtcaacctgggcgccggc
gtcgtgctcggcgtcaccggcggcaacgacctcgcgctgggcggcagcatcggcggcagc
ggcgggctggcgatgaacggcagcggcgccttgaacctcggcggcgccaacaatttcggc
ggcggcgtcgcgctcaacgccggttcgctcggcgtcggcagcaacaccgcgctgggcacc
ggcgcgctcaacgtcggcggcagcgccggcctcagcgcgatcgcgccgggcatcgcgctc
ggcaacgccgtcaccctcggcgccggcgcgcagcttggcatcggcggcggcaacgacctg
agcctgggcggggtcatcgacggcgccggcagcctcggcttcaacggcagcggcacgctc
gcgctgagcgcagccaacaccttcgccggcggggtgaacctcaacgccggcacgctgagc
ctgggcaacaacgccgcgctcggcaccggcgcgctcaacatcggcggcaacgccgcgctg
acctcggcgctgccggggctggcgctggccaacgcggtcaatctcgccgccggcagcgcg
ctgaacttgaacggcaacaacagcctggacttcaacggcaccgtgtccggcagcggcacc
ctggtcaagaacggcagcggcgcgctcggcctcaacgggcaggtggtgggcttcagcggc
ggactgtcgatccagggcggcacgctcaacgtcgccaacgcgatcaccgcgggcctggcg
tcggccgccggcaccaccgccaacttcagcggcggcgcggactcgctgaccgtgaccggc
gcggtcgccggcgcggtgaacctcggcgccggcaacgattcgctgacctccagcctggcc
aacctcgccggcctcaccggcgcgatcaacgccggcgccggcagcgatacgttcgcggtc
aacggcagcggcgacggcgtcctgccggcggcgggcctgagcggcttcgagaacctctcg
ctcgcgcccggcggcaccctggtgttgcccggcggcgccagcggtgcgttcgccgattcc
agcatcggcggcaatctggtgctcgacggcaatctcggcggcaacgcctcggtcgccgcg
ggcggcggtctgatcggcgatggcgcgctggccggtgcgttgacgctcggcggcacgctc
gcgccgtcgggcctcgccggcgccagcggcgcggccgcgggcaccggcgcggtcggcgcg
tcgctgaacgtcgccagcctgacggtcaacccgggcgcgaccctgcaggtgcgccagaac
ggcggcggcgccaccgacagcgtcgtggtcgccggcaacgcggcgatcaacggcggccag
gtggtggcgatcccgcaggccggcagctacgcgccggtcaccgattaccgcatcctcgac
gcgtcctcgctcagcggcgccttcaccggcgtcagccagaccgcgctgccgttcctcgac
gcggccttgttcgtgcagggcaacgacgtgttcctgcgcttgagcgaacacgacgccggc
ggcaccggcatccgcttcaaccagttccccgggttgagcgccaaccagcaggccgtggcc
aacgccctgcaggccatcgccgaccgcaacagcggccagctgccgaccctgatcgccgcc
gcgcgcggcctcagcgcggcgcaggcgccgcgcgcgttcgacaccctcaacggcgaaacc
tacgcctccatcgccagcgcccagcgctacaacgccgagcaactgcagcgcagcgtggcg
cgccagctggacctggcgcgcgacaacggcgtcgacgaggacagcacgctgggcacgctg
tgggccaccgcctacggcggccgcgccgagttcgacggcgagcgcctggccggcatcgac
aacaccgtcggcggcctggcgatcggcctggaaggctcgcctggcgctcatttccgcttc
ggcggccacatcggcatggcccattcgaagatggaaaccgaccgtcgcgacgacaaggtc
gacggcgacctgttcaacgtcggcatccactggctgtacgcgcccggcgcgttctggacc
cagggcgcggccggctacagctacggcagtttcgacgccgagcgcgagatcgcggtgggc
gtgtacaaccgccgcacccaggcgcacttcagcaacgacggcgcgtacgcgatgctcgaa
gccggctggcgctgggacggcgccagcgtgcgcatcgagccgttgctgggcgtgtactac
aacaaggtcgagtcggtgagcttccgcgagcgcggcgccggcgacgccgacctgctggtg
tcggtggccagctacgacaccaccaccgccggcgtcggcgtgcgcttctccggcgcgccc
ggcaacggcgcgcgcaagtggagcccgaccgcggacatccgttacctgcacgacctgcag
gacgaccgcccgtacgcgcgcaacgccttcgccggcgccagcgtgccgggcttcgccacc
accggtttcgccgccgagcgcaatcgctggaacgtgggcctgggcctgcagtaccggatg
gggccggcgagcagcggtttcctggaatatcgcggcgacctcggcagcgacgatcgcgcg
cattcgctcaacctcggcttgcgtttgggctggggcgcgacgccggcgatggcggcggcg
cgcgcggcgccgatggcgacgccgacggcggccgggtgggcggcgcagggcgcgtccgcg
ccgggcgccgcggcgacggattcggggtcggggtcgaattcgagttcgagttcgagtgcg
tcgacgaaggcggcgggtgcggctgcagcgggtgcggccgctgcagccgatccggcggcg
gcttcggcgccgggcgccggttcgggctcgggttcgacgcgcggcgcggccgccgtggcg
gcgacggccggctccaatgcagcaggcttcaatgcagcaggctccaatacggccggctcc
agtgcggcgagcacgaacgccgcgtccgcgacgtcgtcggatccttcgcgcgccggcgcc
ttggccgcggccggcggcggcgcagcggccacggccgcggatgcgaaggttggtagtggc
agcgccggtttcggccagtgcaagctgcgtccggcggcgaaggccgcgccggcgcgcccg
ctcgccaaggccaagcacggcggcgcgcgcccgatctccaagagcaagcgtgtcgcctcg
cgcggcaccggcagcaaggccaagccgcgtcgtccggcgacgcggctggccgccgcgaca
ccgcgatccgtccctccgtcgggcgcggtgacccagccgacgacctggtgcgacgaggct
tcggcccgtacgccgtaa
DBGET
integrated database retrieval system
