Lysobacter yananisis: RDV84_12340
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Entry
RDV84_12340 CDS
T09342
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
lya
Lysobacter yananisis
Pathway
lya00470
D-Amino acid metabolism
lya00550
Peptidoglycan biosynthesis
lya01100
Metabolic pathways
lya01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RDV84_12340
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDV84_12340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RDV84_12340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
RDV84_12340
Enzymes [BR:
lya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RDV84_12340
Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
Precursor biosynthesis
Amino acid ligase
RDV84_12340
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_ST
GARS_A
ATPgrasp_YheCD
ATP-grasp_5
TTL
Motif
Other DBs
NCBI-ProteinID:
WMT05591
UniProt:
A0AA51SKY2
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All DBs
Position
2909550..2910527
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AA seq
325 aa
AA seq
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MSVKFAALRVTDPAVFGRVAVLMGGTSAEREVSLDSGRGVLDALRSRGVDAFAVDGIPAL
IERIRVGGVDRVFNILHGNKGGGEDGVLQGVLEALGVPYTGSDVLGSALAMDKIRTKQVW
IGSGLPTPRFKRIAKGDDVHAAAREIGLPVIIKPSCEGSSVGVSRVLADADIDEAVALAA
RYPGEMLMEQMIVGDELTVAVLIDGEGYTALPSIRIVPKGEWYDYHAKYIAEDTQYLCPG
LDGAAEDEIRRLAMQAFVAAGCKGWGRVDFMRDRDGRFYLIEVNTAPGMTSHSLVPKAAR
QVGIEYDELCWRVLEATVVAGGGAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtgaagttcgccgcgctgcgcgtcaccgacccggccgtgttcggccgcgtcgcc
gtgctcatgggcggcaccagcgccgagcgcgaggtgtcgctggattccggccgcggcgtg
ctcgacgcgctgcgctcgcgcggcgtggacgcgttcgcggtcgacggcatcccggcgttg
atcgagcgcatccgcgtcggcggcgtcgaccgcgtgttcaacatcctgcacggcaacaag
ggcggcggcgaagacggcgtgctgcagggcgtgctcgaggcgctcggcgtgccctacacc
ggatcggacgtgctcggctcggcgctggcgatggacaagatccgcaccaagcaggtgtgg
atcggctcgggcctgccgaccccgcgcttcaagcgcatcgccaagggcgacgacgtgcat
gcggcggcgcgcgagatcggcctgccggtgatcatcaagccgtcgtgcgaaggctccagc
gtcggcgtttcgcgcgtgctcgccgatgccgacatcgacgaagccgtggccctggccgcg
cgctatcccggcgagatgctgatggagcagatgatcgtcggcgacgagctcaccgtcgcg
gtgctgatcgacggcgagggctacaccgcgctgccgtcgatccggatcgtgccgaagggc
gagtggtacgactatcatgccaagtacatcgccgaggacacccagtacctgtgtccgggc
ctggacggcgccgccgaagacgagatccgccgcctggcgatgcaggccttcgtcgccgcc
ggctgcaagggctggggccgcgtcgacttcatgcgcgaccgcgacggccggttctacttg
atcgaggtcaacaccgcgccgggcatgaccagccactcgctggtgcccaaggccgcgcgc
caggtcggcatcgaatacgacgaactgtgctggcgggtgctcgaagccaccgtggtcgcg
ggaggtggcgcggcgtga
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