Lysinibacillus sp. YS11: LBYS11_20260
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Entry
LBYS11_20260 CDS
T05299
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00270
Cysteine and methionine metabolism
lys00450
Selenocompound metabolism
lys00670
One carbon pool by folate
lys01100
Metabolic pathways
lys01110
Biosynthesis of secondary metabolites
lys01230
Biosynthesis of amino acids
lys04980
Cobalamin transport and metabolism
Module
lys_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LBYS11_20260 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LBYS11_20260 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LBYS11_20260 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
LBYS11_20260 (metH)
Enzymes [BR:
lys01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LBYS11_20260 (metH)
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Ortholog
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GFIT
Motif
Pfam:
S-methyl_trans
Met_synt_B12
Pterin_bind
B12-binding
B12-binding_2
CdhD
Motif
Other DBs
NCBI-ProteinID:
AUS88478
LinkDB
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Position
complement(4038087..4041518)
Genome browser
AA seq
1143 aa
AA seq
DB search
MAKHSIEEQLEKRILILDGAMGTMLQNENLSAEDFGGEELDGCNENLVLTRPDVIEKIHH
KYLEAGADIICTNTFGGTPLVLNEYDLGTKAEVINKRAVEIARQAVDRYSTSDWPRFVAG
AMGPTTKTLSVTGGITFEELEENFYVQAKALIEAGADVLLLETSQDMLNVKAGTLGVKRA
FASTGKELPVMISGTIEPMGTTLAGQTIDAFYISIEHIKPLSVGLNCATGPEFMTDHIRS
LAELSTGYISCYPNAGLPDEEGCYHESPESLSQKLKGFAEKGWLNIVGGCCGTTPAHIAA
IREILKDEKPRQLPEKTHGHAVSGIEPLLYDDSMRPLFIGERTNVIGSRKFKNLIIDGKF
EEAAEIARAQVKNGAHVIDICLANPDRDELADIRGFMQEVVKKVKVPLVIDSTDEKVIEE
ALKFSQGKAIINSINLEDGEERFDAVLPLVKKYGASLVVGTIDEKGMAVDRHRKLEIAER
SYQLLTEKWGIAPEDIIFDPLMFPVGTGDEQYIGSALETIEGIRLIKEKLPQTLTVLGVS
NISFGLPPVGREVLNAVYLYHCTQAGLDYAIVNTEKLERYASIPEEEIKLANDLLFNTND
ETLAVFTDFYRDKKKEKTEADIPKTVEGRLAYYILEGTKEGLIEDLDAAREIFEAPLDII
NGPLMEGMAEVGRLFNDNQLIVAEVLQSAGVMKAAVAHLEQFMEKDEESAGKGKMVLATV
KGDVHDIGKNLVDIILSNNGYKVVDLGIKVTPAQLIEAIRKEKPDFIGLSGLLVKSAQQM
VITAQDFKEAGIDVPILVGGAALSRRFTETKIADEYGGPVIYAKDAMQGLEQANLLMGEG
TREKFLAEIEESRQKRLEADEKRAARPAKEVTIKPARTVKGAPVFLPADLRRHVKKDYSV
SHLYPYVNMRTLLGHHLGLKGQVQQLLDAGDSRATELKDLVDDYLKSDLLKPSGLYQFFP
AQADGDDVVVYDPADSKTEIERFTFPRQQVEPFLCLADFLKTVESGEMDYIALMVVTAGQ
GVMATAHQLKEDGKFLESHALQSTALELAEGFAERMHQEIRDQWGFPDATDFTMRDRFAA
KYQGQRFSFGYPACPNLEDQEKLFGLLKPEDIGVHLTEGFMMEPEASVSAIVFAHPDARY
FNV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcactcgattgaagagcaactagagaaacgtattttaattcttgatggcgca
atgggaacaatgctacaaaatgaaaatttatcagcagaggattttggtggcgaggaactt
gatggctgtaatgaaaatcttgtgcttactagaccagatgttattgaaaaaattcaccat
aaatacttagaggcaggcgcagatattatttgtacaaatacatttggtgggacgcctctt
gtgttaaatgaatatgatcttggcacaaaagcagaagtaattaataagcgtgcagtggaa
attgctcgacaagcagtggatcgttattccacatcggattggccacgttttgttgcaggg
gctatggggccaacaacaaaaacgttatcagtaacaggtggtattacatttgaagagcta
gaggaaaatttttatgtacaggcaaaagctttaattgaggcaggagccgacgttttgtta
ttagaaacaagtcaggatatgctcaatgtcaaagcaggcacacttggcgtaaagcgcgct
tttgcatcaacgggaaaagagctacctgtcatgatttcaggaacaatagaaccgatgggt
acaacgcttgcagggcaaacaattgatgccttttatatttcgatcgagcatattaaacca
ttatcagttggcctaaactgtgcgacgggacctgagtttatgacggatcacattcgttca
ttagcagagctttcaacaggctatattagctgttacccaaatgctggcttaccagatgaa
gaagggtgttatcatgaatcaccagaatcgctatcgcaaaaattaaaaggttttgcagaa
aagggttggcttaatattgtaggtggatgttgtgggacgacacccgctcatattgcagcc
attcgtgagatcttaaaagatgaaaaacctcgtcaattaccagaaaaaacacatggtcat
gcggtatcaggaattgaaccgttattgtatgacgattctatgcgtccgttatttattggg
gagagaacaaatgttatcggctctcgtaaatttaagaatttaatcattgatggaaagttt
gaggaggccgcagagattgcacgtgctcaagttaaaaatggtgcacatgttatcgatatt
tgtttagccaaccctgatcgtgatgaattagccgatatacgtggatttatgcaggaggtt
gtaaaaaaggttaaggtgcctcttgtgattgactcaactgatgaaaaagtaattgaggaa
gcattaaagttttctcaagggaaagccatcattaactctattaatctagaggatggtgaa
gaacggtttgatgcagtgttaccactggtgaaaaaatatggtgcatcattagttgttgga
acgatagatgaaaagggaatggcggttgaccgtcatcgaaagcttgaaattgccgaacgc
tcctatcaacttttaacggagaaatggggaattgcaccagaggatatcattttcgaccca
ttaatgttccctgtaggaacgggcgatgagcagtatattggttcagctttggaaacgatt
gaaggcattcgactcatcaaagaaaaattgccgcagacattgacggtacttggcgtaagt
aatatttcatttggcttaccaccagttggccgtgaagtactgaatgctgtctacctctat
cattgtacacaggcaggcttagattatgccattgttaatacagagaaattggagcgttac
gcatccataccggaagaggaaattaaactcgcaaatgacctgctctttaatacaaatgat
gaaacattagcagtgtttacagatttttatcgtgataaaaagaaggaaaaaacggaagcc
gatattccgaaaacggttgaaggtcgtttagcttactatatattagaaggaactaaagaa
gggctaattgaggatttagacgctgcacgggaaatcttcgaggcgccgcttgatataatt
aatggtcctttaatggagggcatggctgaggtaggtagattatttaatgataatcaactc
attgtagcagaggttttacaatcagcaggggtgatgaaggccgctgttgctcatttagag
caattcatggagaaggatgaagagagtgctgggaaagggaaaatggtccttgctacggta
aaaggtgatgttcacgatattgggaaaaaccttgttgatattatattaagtaataatggc
tataaggttgtcgatttgggcattaaagtaacccctgcccaattgattgaagcaattcgt
aaggaaaaaccagattttattgggctgtcaggtttactcgtgaaatcagcgcaacagatg
gtaattactgctcaggattttaaagaggcgggaattgatgtacctattttagttggtgga
gctgcactttctcgtcgttttactgaaacaaaaattgcagatgaatatggcggtcctgtt
atttatgcaaaggatgctatgcaaggcttagagcaagcgaatctattaatgggtgaaggg
acacgtgaaaaattcttagcagaaattgaagaatcccgtcaaaaacgtttagaggccgat
gaaaaacgagctgctcgtcctgcaaaagaggtaacaataaagcccgcacgaacagtaaag
ggagcgcctgtatttttaccagctgatttacgacgtcatgtgaaaaaagactattctgta
tcgcatttatatccttatgttaatatgcgtactttattgggacaccatttaggcttgaaa
gggcaggttcagcaattgcttgatgcgggtgattcaagagcaacagagctaaaggattta
gtagatgattatttgaaaagtgatctattaaagccatcaggtttgtatcaatttttccct
gctcaagcagatggtgatgatgtcgttgtgtatgatccagctgatagtaagacggaaatt
gaacgttttaccttccctcgtcagcaggtggaaccatttttatgtcttgcagatttctta
aaaacggtagagagcggtgaaatggactatattgcgcttatggttgtaacagcaggtcaa
ggagtaatggctacagctcaccagttaaaagaggatgggaaattccttgaaagtcatgcc
ttgcaatctactgctttagaattagcagagggctttgctgaacgtatgcatcaggaaatt
cgtgaccaatggggcttccctgatgcaacagatttcactatgagagatcgttttgctgca
aaatatcaggggcaacgcttttcattcggatatcctgcatgtcctaacttggaggatcaa
gaaaaactattcggcttgttaaaacctgaggatattggcgtccatcttacagaaggcttt
atgatggagccagaagcatctgtatctgcaatcgtttttgctcatcctgatgctcgctac
ttcaatgtttaa
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