Lysobacter sp. TY2-98: DWG18_05990
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Entry
DWG18_05990 CDS
T05586
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt00010
Glycolysis / Gluconeogenesis
lyt00020
Citrate cycle (TCA cycle)
lyt00260
Glycine, serine and threonine metabolism
lyt00280
Valine, leucine and isoleucine degradation
lyt00310
Lysine degradation
lyt00380
Tryptophan metabolism
lyt00620
Pyruvate metabolism
lyt00630
Glyoxylate and dicarboxylate metabolism
lyt00640
Propanoate metabolism
lyt00785
Lipoic acid metabolism
lyt01100
Metabolic pathways
lyt01110
Biosynthesis of secondary metabolites
lyt01120
Microbial metabolism in diverse environments
lyt01200
Carbon metabolism
lyt01210
2-Oxocarboxylic acid metabolism
lyt01240
Biosynthesis of cofactors
Module
lyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyt_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
lyt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lyt_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DWG18_05990 (lpdA)
00020 Citrate cycle (TCA cycle)
DWG18_05990 (lpdA)
00620 Pyruvate metabolism
DWG18_05990 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DWG18_05990 (lpdA)
00640 Propanoate metabolism
DWG18_05990 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DWG18_05990 (lpdA)
00280 Valine, leucine and isoleucine degradation
DWG18_05990 (lpdA)
00310 Lysine degradation
DWG18_05990 (lpdA)
00380 Tryptophan metabolism
DWG18_05990 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DWG18_05990 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyt04147
]
DWG18_05990 (lpdA)
Enzymes [BR:
lyt01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DWG18_05990 (lpdA)
Exosome [BR:
lyt04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DWG18_05990 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
GIDA
HI0933_like
FAD_binding_2
FAD_oxidored
3HCDH_N
DAO
Thi4
Pyr_redox_3
Lycopene_cycl
NAD_binding_8
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AXK71881
UniProt:
A0A345ZJF6
LinkDB
All DBs
Position
1277884..1279314
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AA seq
476 aa
AA seq
DB search
MSEQQQFDVVVIGAGPAGYHAAIRAAQLGLKTACIDAALGKDGQPALGGTCLRVGCIPSK
ALLDSSRQFWNMHHIFDQHGISFSNEKIDVGTMVGRKDKIVKQFTGGIAQLFKANKITTF
YGFGQLQPGNVVVVKQHDGSTVELKGTNVIIAAGSDSIELPFAKFGEHIVDNVGALDFTE
VPKRLGVIGAGVIGLELGSVWNRLGSQVTILEGLPNFLAAADGEVAKVAAREFKKQNLDI
RLGCKVSNTEVKKDGVHVSYTDDKGATQELVVDKLLVAVGRRAATKNLLADGTGVKVNER
GQIEVDEHCHTGVDGVWAVGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNFDTIPWVIY
TEPEIAWVGKTEEQLKAEGIPYKAGSFPFAAVGRAVAMAEPAGFVKVLAHAETDTVLGMH
LVGANVSELVHEGVLTMEFKGSADDLARICHAHPSLSEAVHDAAMAVHKRAIHKAN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagcagcaattcgacgtcgtcgtcatcggcgccggccccgcgggctaccac
gccgccatccgcgccgcgcagctcggcctgaagaccgcgtgcatcgacgcggcgctcggc
aaggacggccagccggccctcggcggcacctgcctgcgcgtgggctgcattccgtccaag
gcgctgctcgattcgtcgcgccagttctggaacatgcaccacatcttcgaccagcacggc
atttcgttctcgaacgaaaagatcgacgtcggcacgatggttggtcgcaaggacaagatc
gtcaagcagttcaccggcggcatcgcgcagctgttcaaggcgaacaagatcacgacgttc
tacggcttcggccagctgcagccgggcaacgtcgtggtggtcaagcagcacgacggcagc
accgtcgaactcaagggcacgaatgtcatcattgccgcgggttcggattcgatcgaactg
ccgttcgcgaagttcggcgagcacatcgtcgacaacgtcggcgcgctcgacttcaccgaa
gtgccgaagcgcctcggcgtgatcggcgccggcgtgatcggcctcgaactcggcagcgtg
tggaaccgcctgggttcgcaagtcacgatcctcgaaggcctgcccaacttcctcgcagcc
gccgacggcgaagtggcgaaggtcgcggcgcgcgagttcaagaagcagaacctcgatatc
cgcctcggctgcaaggtctcgaacaccgaggtcaagaaggacggcgtgcacgtcagctac
accgacgacaagggtgcgacgcaggaactcgtggtcgacaagctgctggtggccgtcggc
cgccgcgccgcgacgaagaacctgctcgccgacggcacgggcgtcaaggtcaacgagcgc
ggccagatcgaagtcgacgagcactgccacaccggcgtcgacggcgtgtgggcggtcggc
gactgcgtgcgcggcccaatgctggcgcacaagggcttcgaggaaggcatcgcggtcgcc
gaactcatcgccggcctgccgggccacgtcaacttcgacacgattccgtgggtgatctac
accgagccggagatcgcctgggtcggcaagaccgaggagcagctcaaggccgagggcatt
ccgtacaaggccggcagcttcccgttcgccgcggtggggcgcgcggtcgcgatggccgag
cccgcgggcttcgtgaaggtgctcgcgcacgcggagaccgacacggtgctcggcatgcac
ctggtcggcgcgaacgtgtccgaactcgtgcacgaaggcgtgctgacgatggagttcaag
ggttcggccgacgacctcgcccgtatctgccacgcgcatccttcactgtcggaagccgtg
cacgacgccgcgatggccgtccacaagcgcgccatccacaaggcgaactga
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