KEGG   Lysobacter sp. TY2-98: DWG18_05990
Entry
DWG18_05990       CDS       T05586                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lyt  Lysobacter sp. TY2-98
Pathway
lyt00010  Glycolysis / Gluconeogenesis
lyt00020  Citrate cycle (TCA cycle)
lyt00260  Glycine, serine and threonine metabolism
lyt00280  Valine, leucine and isoleucine degradation
lyt00310  Lysine degradation
lyt00380  Tryptophan metabolism
lyt00620  Pyruvate metabolism
lyt00630  Glyoxylate and dicarboxylate metabolism
lyt00640  Propanoate metabolism
lyt00785  Lipoic acid metabolism
lyt01100  Metabolic pathways
lyt01110  Biosynthesis of secondary metabolites
lyt01120  Microbial metabolism in diverse environments
lyt01200  Carbon metabolism
lyt01210  2-Oxocarboxylic acid metabolism
lyt01240  Biosynthesis of cofactors
Module
lyt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lyt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyt_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lyt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lyt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lyt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DWG18_05990 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DWG18_05990 (lpdA)
   00620 Pyruvate metabolism
    DWG18_05990 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DWG18_05990 (lpdA)
   00640 Propanoate metabolism
    DWG18_05990 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DWG18_05990 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DWG18_05990 (lpdA)
   00310 Lysine degradation
    DWG18_05990 (lpdA)
   00380 Tryptophan metabolism
    DWG18_05990 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DWG18_05990 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lyt04147]
    DWG18_05990 (lpdA)
Enzymes [BR:lyt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DWG18_05990 (lpdA)
Exosome [BR:lyt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DWG18_05990 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C GIDA HI0933_like FAD_binding_2 FAD_oxidored 3HCDH_N DAO Thi4 Pyr_redox_3 Lycopene_cycl NAD_binding_8 FAD_binding_3
Other DBs
NCBI-ProteinID: AXK71881
UniProt: A0A345ZJF6
LinkDB
Position
1277884..1279314
AA seq 476 aa
MSEQQQFDVVVIGAGPAGYHAAIRAAQLGLKTACIDAALGKDGQPALGGTCLRVGCIPSK
ALLDSSRQFWNMHHIFDQHGISFSNEKIDVGTMVGRKDKIVKQFTGGIAQLFKANKITTF
YGFGQLQPGNVVVVKQHDGSTVELKGTNVIIAAGSDSIELPFAKFGEHIVDNVGALDFTE
VPKRLGVIGAGVIGLELGSVWNRLGSQVTILEGLPNFLAAADGEVAKVAAREFKKQNLDI
RLGCKVSNTEVKKDGVHVSYTDDKGATQELVVDKLLVAVGRRAATKNLLADGTGVKVNER
GQIEVDEHCHTGVDGVWAVGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNFDTIPWVIY
TEPEIAWVGKTEEQLKAEGIPYKAGSFPFAAVGRAVAMAEPAGFVKVLAHAETDTVLGMH
LVGANVSELVHEGVLTMEFKGSADDLARICHAHPSLSEAVHDAAMAVHKRAIHKAN
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagcgaacagcagcaattcgacgtcgtcgtcatcggcgccggccccgcgggctaccac
gccgccatccgcgccgcgcagctcggcctgaagaccgcgtgcatcgacgcggcgctcggc
aaggacggccagccggccctcggcggcacctgcctgcgcgtgggctgcattccgtccaag
gcgctgctcgattcgtcgcgccagttctggaacatgcaccacatcttcgaccagcacggc
atttcgttctcgaacgaaaagatcgacgtcggcacgatggttggtcgcaaggacaagatc
gtcaagcagttcaccggcggcatcgcgcagctgttcaaggcgaacaagatcacgacgttc
tacggcttcggccagctgcagccgggcaacgtcgtggtggtcaagcagcacgacggcagc
accgtcgaactcaagggcacgaatgtcatcattgccgcgggttcggattcgatcgaactg
ccgttcgcgaagttcggcgagcacatcgtcgacaacgtcggcgcgctcgacttcaccgaa
gtgccgaagcgcctcggcgtgatcggcgccggcgtgatcggcctcgaactcggcagcgtg
tggaaccgcctgggttcgcaagtcacgatcctcgaaggcctgcccaacttcctcgcagcc
gccgacggcgaagtggcgaaggtcgcggcgcgcgagttcaagaagcagaacctcgatatc
cgcctcggctgcaaggtctcgaacaccgaggtcaagaaggacggcgtgcacgtcagctac
accgacgacaagggtgcgacgcaggaactcgtggtcgacaagctgctggtggccgtcggc
cgccgcgccgcgacgaagaacctgctcgccgacggcacgggcgtcaaggtcaacgagcgc
ggccagatcgaagtcgacgagcactgccacaccggcgtcgacggcgtgtgggcggtcggc
gactgcgtgcgcggcccaatgctggcgcacaagggcttcgaggaaggcatcgcggtcgcc
gaactcatcgccggcctgccgggccacgtcaacttcgacacgattccgtgggtgatctac
accgagccggagatcgcctgggtcggcaagaccgaggagcagctcaaggccgagggcatt
ccgtacaaggccggcagcttcccgttcgccgcggtggggcgcgcggtcgcgatggccgag
cccgcgggcttcgtgaaggtgctcgcgcacgcggagaccgacacggtgctcggcatgcac
ctggtcggcgcgaacgtgtccgaactcgtgcacgaaggcgtgctgacgatggagttcaag
ggttcggccgacgacctcgcccgtatctgccacgcgcatccttcactgtcggaagccgtg
cacgacgccgcgatggccgtccacaagcgcgccatccacaaggcgaactga

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