Lysobacter sp. TY2-98: DWG18_10950
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Entry
DWG18_10950 CDS
T05586
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt00010
Glycolysis / Gluconeogenesis
lyt00020
Citrate cycle (TCA cycle)
lyt00260
Glycine, serine and threonine metabolism
lyt00280
Valine, leucine and isoleucine degradation
lyt00310
Lysine degradation
lyt00380
Tryptophan metabolism
lyt00620
Pyruvate metabolism
lyt00630
Glyoxylate and dicarboxylate metabolism
lyt00640
Propanoate metabolism
lyt00785
Lipoic acid metabolism
lyt01100
Metabolic pathways
lyt01110
Biosynthesis of secondary metabolites
lyt01120
Microbial metabolism in diverse environments
lyt01200
Carbon metabolism
lyt01210
2-Oxocarboxylic acid metabolism
lyt01240
Biosynthesis of cofactors
Module
lyt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyt_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
lyt_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lyt_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DWG18_10950 (lpdA)
00020 Citrate cycle (TCA cycle)
DWG18_10950 (lpdA)
00620 Pyruvate metabolism
DWG18_10950 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DWG18_10950 (lpdA)
00640 Propanoate metabolism
DWG18_10950 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DWG18_10950 (lpdA)
00280 Valine, leucine and isoleucine degradation
DWG18_10950 (lpdA)
00310 Lysine degradation
DWG18_10950 (lpdA)
00380 Tryptophan metabolism
DWG18_10950 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DWG18_10950 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyt04147
]
DWG18_10950 (lpdA)
Enzymes [BR:
lyt01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DWG18_10950 (lpdA)
Exosome [BR:
lyt04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DWG18_10950 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
NAD_binding_8
HI0933_like
GIDA
FAD_binding_2
Biotin_lipoyl_2
AlaDh_PNT_C
GCV_H
Thi4
DUF6264
DUF478
HlyD_D23
FAD_binding_3
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
AXK72743
UniProt:
A0A345ZLW8
LinkDB
All DBs
Position
complement(2262193..2263992)
Genome browser
AA seq
599 aa
AA seq
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MATPIEVKVPDIGGFDDVPVIEVLVAVGDRVAKDQGLVTLESDKATMEVPSSAEGIVREL
RVKLGDKVSEGAVIVVLEAEAAAGADAKAASPAPAAATAPAAPAAAPAPAPAAHGSASAP
NAAASTARKADVECRMLVLGAGPGGYTAAFRAADLGLDTVLVERYASLGGVCLNVGCIPS
KALLHAAAVIDEAQHAKDYGITFGAPKIELDALRTYKDKVVGQLTKGLAGMAKQRKVRTV
QGTGRFVSPNEVEVQGEAGTQLIRFEQCIIAAGSQAVKLPNFPWADKRVMDSTDALDLAD
VPKSLLVVGGGIIGLEMATVYRALGSQVTVVELASQLMPGADVDLVKPLADRLKKQGVAV
HLNVKAAGVEATKAGIKVTFEGEGAPQPTAYDRVLVAVGRSPNGAKIGAEAAGVQVTDRG
FIPVDRQMRTNVPHIFAIGDVVGNPMLAHKATHEGKLAAEVAAGEKREWVARVIPSVAYT
DPEIAWVGVTETEAKAKGLKVGVGKFPWAASGRAIGLGRTEGFTKLVFDEASHRVIGGGI
VGVHAGDLIAEVALAIEMGCEVADIGMTIHPHPTLSESVGMAAEVFEGTITDLYIPKKK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgatcgaagtgaaagtccccgatatcggtggcttcgatgacgtgcctgtg
atcgaggtgctggtcgcggtcggcgatcgcgtggcgaaggatcagggtctcgtcaccctc
gaatccgacaaggcgacgatggaagtgccgtcgtccgctgaaggcatcgtgcgggagctg
cgcgtcaagctgggcgacaaggtgtcggaaggcgcggtgatcgtcgtgctcgaggccgag
gccgccgcgggagcggacgcgaaggcagcgtcacccgccccggcagcggcgaccgcgcct
gccgcacccgcagccgccccggctcctgcaccggcggcgcacgggtctgcgtccgcgccg
aacgccgccgcttcgaccgctcgaaaggccgacgtcgaatgccggatgctcgtactcggc
gccggtcccggcggttacaccgccgcattccgcgctgcggatctcggcctcgacaccgtg
ctcgtcgaacgctatgcgtcgctcggcggcgtctgcctcaacgtcggctgcatcccatcg
aaggcgctgctgcacgcggccgccgtcatcgacgaagcgcagcatgcgaaggactacggc
atcaccttcggcgcacccaagatcgaactcgacgccctgcgcacgtacaaggacaaggtc
gtcggccagctgaccaagggcctcgccggcatggcgaagcagcgcaaggtgcgcacggtg
cagggcaccggtcggttcgtctcgccgaacgaagtcgaagtgcagggcgaggccggtacg
cagctcatccgcttcgagcaatgcatcatcgccgcgggctcgcaggcggtgaagctgccg
aacttcccatgggccgacaagcgcgtcatggattccaccgacgcgctcgatctcgccgac
gtgccgaagtcgttgctcgtcgtcggcggcggcatcatcggcctggaaatggcgacggtg
tatcgcgcgctgggatcgcaggtcaccgtggtcgagctcgcctcgcagctcatgccgggt
gcggacgtcgacctggtcaagccgctcgccgatcgcctgaagaagcagggcgttgccgtg
catctcaacgtcaaggcagccggtgtcgaagcgacgaaggccggcatcaaagtgacgttc
gaaggcgagggtgcgccgcagccgaccgcttacgatcgcgtgctcgttgcagtcggtcgc
agcccgaacggcgcgaagatcggcgccgaagccgcaggcgtgcaggtcaccgaccgcggc
ttcattccggtcgatcggcagatgcgcacgaacgtgccgcacatcttcgcgattggcgac
gtcgtcgggaatccgatgctcgcgcacaaggcgacgcacgagggcaagctcgccgccgaa
gtcgccgccggcgaaaagcgcgaatgggtcgcgcgggtgattccgtcggtcgcctacacc
gatccggagatcgcgtgggtcggcgttaccgaaaccgaagcgaaggcgaagggcctgaag
gtcggcgtcggcaagttcccgtgggcggcgagcggtcgcgcgattggtctcggtcgcacc
gaaggtttcaccaagctcgtgttcgacgaagccagccatcgcgtcatcggcggcgggatc
gttggcgtgcacgcgggcgatctcatcgccgaagtcgcgctcgcgatcgaaatgggctgc
gaggtcgccgacatcggcatgacgatccatccgcatccgaccctcagcgagtcggtgggc
atggccgccgaagtgttcgaaggcacgatcaccgacctctacatcccgaagaagaagtag
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