KEGG   Lysobacter sp. TY2-98: DWG18_10950
Entry
DWG18_10950       CDS       T05586                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lyt  Lysobacter sp. TY2-98
Pathway
lyt00010  Glycolysis / Gluconeogenesis
lyt00020  Citrate cycle (TCA cycle)
lyt00260  Glycine, serine and threonine metabolism
lyt00280  Valine, leucine and isoleucine degradation
lyt00310  Lysine degradation
lyt00380  Tryptophan metabolism
lyt00620  Pyruvate metabolism
lyt00630  Glyoxylate and dicarboxylate metabolism
lyt00640  Propanoate metabolism
lyt00785  Lipoic acid metabolism
lyt01100  Metabolic pathways
lyt01110  Biosynthesis of secondary metabolites
lyt01120  Microbial metabolism in diverse environments
lyt01200  Carbon metabolism
lyt01210  2-Oxocarboxylic acid metabolism
lyt01240  Biosynthesis of cofactors
Module
lyt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lyt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyt_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lyt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lyt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lyt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DWG18_10950 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DWG18_10950 (lpdA)
   00620 Pyruvate metabolism
    DWG18_10950 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DWG18_10950 (lpdA)
   00640 Propanoate metabolism
    DWG18_10950 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DWG18_10950 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DWG18_10950 (lpdA)
   00310 Lysine degradation
    DWG18_10950 (lpdA)
   00380 Tryptophan metabolism
    DWG18_10950 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DWG18_10950 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lyt04147]
    DWG18_10950 (lpdA)
Enzymes [BR:lyt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DWG18_10950 (lpdA)
Exosome [BR:lyt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DWG18_10950 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored NAD_binding_8 HI0933_like GIDA FAD_binding_2 Biotin_lipoyl_2 AlaDh_PNT_C GCV_H Thi4 DUF6264 DUF478 HlyD_D23 FAD_binding_3 DEC-1_N
Other DBs
NCBI-ProteinID: AXK72743
UniProt: A0A345ZLW8
LinkDB
Position
complement(2262193..2263992)
AA seq 599 aa
MATPIEVKVPDIGGFDDVPVIEVLVAVGDRVAKDQGLVTLESDKATMEVPSSAEGIVREL
RVKLGDKVSEGAVIVVLEAEAAAGADAKAASPAPAAATAPAAPAAAPAPAPAAHGSASAP
NAAASTARKADVECRMLVLGAGPGGYTAAFRAADLGLDTVLVERYASLGGVCLNVGCIPS
KALLHAAAVIDEAQHAKDYGITFGAPKIELDALRTYKDKVVGQLTKGLAGMAKQRKVRTV
QGTGRFVSPNEVEVQGEAGTQLIRFEQCIIAAGSQAVKLPNFPWADKRVMDSTDALDLAD
VPKSLLVVGGGIIGLEMATVYRALGSQVTVVELASQLMPGADVDLVKPLADRLKKQGVAV
HLNVKAAGVEATKAGIKVTFEGEGAPQPTAYDRVLVAVGRSPNGAKIGAEAAGVQVTDRG
FIPVDRQMRTNVPHIFAIGDVVGNPMLAHKATHEGKLAAEVAAGEKREWVARVIPSVAYT
DPEIAWVGVTETEAKAKGLKVGVGKFPWAASGRAIGLGRTEGFTKLVFDEASHRVIGGGI
VGVHAGDLIAEVALAIEMGCEVADIGMTIHPHPTLSESVGMAAEVFEGTITDLYIPKKK
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcgaccccgatcgaagtgaaagtccccgatatcggtggcttcgatgacgtgcctgtg
atcgaggtgctggtcgcggtcggcgatcgcgtggcgaaggatcagggtctcgtcaccctc
gaatccgacaaggcgacgatggaagtgccgtcgtccgctgaaggcatcgtgcgggagctg
cgcgtcaagctgggcgacaaggtgtcggaaggcgcggtgatcgtcgtgctcgaggccgag
gccgccgcgggagcggacgcgaaggcagcgtcacccgccccggcagcggcgaccgcgcct
gccgcacccgcagccgccccggctcctgcaccggcggcgcacgggtctgcgtccgcgccg
aacgccgccgcttcgaccgctcgaaaggccgacgtcgaatgccggatgctcgtactcggc
gccggtcccggcggttacaccgccgcattccgcgctgcggatctcggcctcgacaccgtg
ctcgtcgaacgctatgcgtcgctcggcggcgtctgcctcaacgtcggctgcatcccatcg
aaggcgctgctgcacgcggccgccgtcatcgacgaagcgcagcatgcgaaggactacggc
atcaccttcggcgcacccaagatcgaactcgacgccctgcgcacgtacaaggacaaggtc
gtcggccagctgaccaagggcctcgccggcatggcgaagcagcgcaaggtgcgcacggtg
cagggcaccggtcggttcgtctcgccgaacgaagtcgaagtgcagggcgaggccggtacg
cagctcatccgcttcgagcaatgcatcatcgccgcgggctcgcaggcggtgaagctgccg
aacttcccatgggccgacaagcgcgtcatggattccaccgacgcgctcgatctcgccgac
gtgccgaagtcgttgctcgtcgtcggcggcggcatcatcggcctggaaatggcgacggtg
tatcgcgcgctgggatcgcaggtcaccgtggtcgagctcgcctcgcagctcatgccgggt
gcggacgtcgacctggtcaagccgctcgccgatcgcctgaagaagcagggcgttgccgtg
catctcaacgtcaaggcagccggtgtcgaagcgacgaaggccggcatcaaagtgacgttc
gaaggcgagggtgcgccgcagccgaccgcttacgatcgcgtgctcgttgcagtcggtcgc
agcccgaacggcgcgaagatcggcgccgaagccgcaggcgtgcaggtcaccgaccgcggc
ttcattccggtcgatcggcagatgcgcacgaacgtgccgcacatcttcgcgattggcgac
gtcgtcgggaatccgatgctcgcgcacaaggcgacgcacgagggcaagctcgccgccgaa
gtcgccgccggcgaaaagcgcgaatgggtcgcgcgggtgattccgtcggtcgcctacacc
gatccggagatcgcgtgggtcggcgttaccgaaaccgaagcgaaggcgaagggcctgaag
gtcggcgtcggcaagttcccgtgggcggcgagcggtcgcgcgattggtctcggtcgcacc
gaaggtttcaccaagctcgtgttcgacgaagccagccatcgcgtcatcggcggcgggatc
gttggcgtgcacgcgggcgatctcatcgccgaagtcgcgctcgcgatcgaaatgggctgc
gaggtcgccgacatcggcatgacgatccatccgcatccgaccctcagcgagtcggtgggc
atggccgccgaagtgttcgaaggcacgatcaccgacctctacatcccgaagaagaagtag

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