Lysobacter sp. TY2-98: DWG18_13970
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Entry
DWG18_13970 CDS
T05586
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lyt
Lysobacter sp. TY2-98
Pathway
lyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DWG18_13970 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyt03400
]
DWG18_13970 (recD)
Enzymes [BR:
lyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DWG18_13970 (recD)
DNA repair and recombination proteins [BR:
lyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DWG18_13970 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
Helicase_RecD
AAA_22
SH3_13
UvrD_C
AAA_16
nSTAND3
DEAD
RecD_N
T2SSE
SLFN-g3_helicase
NACHT
AAA_29
NTPase_1
AAA
AAA_28
SRP54
ATPase
Motif
Other DBs
NCBI-ProteinID:
AXK73276
UniProt:
A0A345ZNF1
LinkDB
All DBs
Position
2885598..2887343
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AA seq
581 aa
AA seq
DB search
MSLLDTLQRSGAVRPIDLALAHALQRVDGAVAEPVLVAAALASYAVAQGHAAFDLDGARD
LVEGTIDWPDTMDWREALAACTWIAKPDADVESDAAAPLVVEQGRVYLRRYREYERRLAI
ALTRLSAATIPPALADIDALHARLFPQRDAGDAQAEAARRALESPVLLVTGGPGTGKTTT
IARVLLLLAAQARATGAAPLRIALAAPTGRAADRMAGSVRRIADDLRGAGIDAELCDALP
TTASTLHRLLGLVPGQTRARFDAKQPLRVDVLVVDEASMVDLPLMCKLAEALPTGARLLL
LGDRDQLPSVEAGDVLAALADAADVAPSPRTPLAGRRAHLDRGYRQTDALRLEPVADAVR
RGDVDATLARLRGGASGVTFHEDALDPLTPSLREQLLAPWRELRDCTDPREALARVNRTR
LLTALRDGPQGATQLNARIEAALAGTQRETYFPGRLLMITENSTRHGLFNGDVGVCLRDD
DGTLLAWFEGADGVRAFPPGALPAHTGGFAITVHKAQGSEFDRVWLQLPAVDTRVLSREL
LYTGITRARSTLHVLGPASAIASALSRHARRVSGLARRLGA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcgatacgctccagcgaagtggtgcggtgcggccgatcgatctcgcactc
gcgcatgcgttgcagcgcgtggatggcgccgtcgccgagccggtgctggtggcggccgcg
ctggcgtcgtatgcggtggcccaagggcatgccgcgttcgatctcgacggcgcgcgcgat
ctggtcgaagggacgatcgactggcccgatacgatggactggcgcgaggcgctcgccgcc
tgcacgtggatcgcgaagccggatgccgacgtcgagagcgatgccgccgcgccgctcgtc
gtcgaacagggccgcgtctacctgcgccgctatcgcgaatacgagcgacgcctggcgatc
gcgctgacgcggttgagcgctgcgacgattccgcctgcactcgccgatatcgatgcgttg
catgcacggcttttcccgcagcgcgacgccggcgacgcgcaggccgaggcggcgcgccgc
gcgctcgagtcgccggtgctgctggtcaccggcggccccggcaccggcaagaccaccacg
atcgcgcgcgtgctcctgctgctggccgcgcaggcgcgtgcgaccggcgccgcgccgctg
cgcatcgcgctggccgcgcccaccggccgcgccgccgatcgcatggccggcagcgtgcgc
cgcatcgccgacgacctgcgcggtgcgggcatcgacgccgaactttgcgatgcgctgccc
accaccgcgtcgacgctgcaccgcctgctgggtctggtgcccgggcagacgcgcgcgcgc
ttcgatgcgaaacagccgcttcgcgtggatgtgctggtggtcgacgaagcgtcgatggtc
gacctgccgctgatgtgcaagctggcggaagccttgccgaccggcgcgcgcctgctgctg
ctcggtgatcgcgaccagctgccgtcggtcgaggcgggcgacgtgctcgccgcgctcgcc
gacgcagccgatgtggcgccatccccgcgcacgccgctcgcgggccgtcgcgcgcatctc
gatcgcggttaccggcagaccgacgcgctgcggctcgaaccggtcgccgacgccgtgcgc
cgcggcgatgtcgatgcgacgctagcgcgcctgcggggcggagcgagcggcgtgacgttc
cacgaggacgcgctcgatccactgacaccgtccctgcgtgagcagctgctggcgccttgg
cgcgaactgcgcgattgcacggatccgcgcgaagcactcgcgcgcgtcaatcgcacgcgc
ctgctcaccgcgctgcgcgacggaccgcagggtgcgacgcaactcaatgcccgtatcgag
gccgcgctcgccggcacgcagcgcgagacctacttccccggccgcctgttgatgatcacc
gagaacagcacgcgccacggcctgttcaacggcgacgtgggcgtctgcctgcgcgatgac
gacggcacgctgctggcatggttcgaaggcgccgatggcgtgcgcgcctttccgccgggc
gcgctgccggcgcataccggcgggttcgcgatcactgtgcacaaggcgcagggctcggag
ttcgatcgcgtctggctgcagttgccggcggtcgacacgcgcgtgctgtcgcgcgaactg
ctctacaccggcatcacgcgtgcacgcagcacgctgcacgtgctcgggccggcgtcggcg
atcgcgtccgcgctgtcgcgccatgcgcggcgcgtttccggcctcgcgcgtcgactcggt
gcgtag
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