KEGG   Methanosarcina acetivorans: MA_2571Help
Entry
MA_2571           CDS       T00080                                 

Gene name
lig
Definition
(GenBank) DNA ligase (ATP)
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mac  Methanosarcina acetivorans
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mac00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    MA_2571 (lig)
   03410 Base excision repair
    MA_2571 (lig)
   03420 Nucleotide excision repair
    MA_2571 (lig)
   03430 Mismatch repair
    MA_2571 (lig)
Enzymes [BR:mac01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MA_2571 (lig)
    6.5.1.6  DNA ligase (ATP or NAD+)
     MA_2571 (lig)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MA_2571 (lig)
DNA replication proteins [BR:mac03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MA_2571 (lig)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MA_2571 (lig)
DNA repair and recombination proteins [BR:mac03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MA_2571 (lig)
   NER (nucleotide excision repair)
    Other NER factors
     MA_2571 (lig)
   MMR (mismatch exicision repair)
    Other MMR factors
     MA_2571 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(3197504..3199210)
Genome map
AA seq 568 aa AA seqDB search
MTSFREFAETCQAIEKISSTIETTNKVADLLKKVDVEELPLATHFIMSEVFPAWSGEQLG
IGTSLLYSSLSKASGMSVRSIESLIRTTGDIGETALLILKEKRKNQVTFSSFLEEQPELS
ITEVYQRFKTASEASGKGSQELKIKNLQFLFNSSTPREAKYISRLALEELRIGVGEGVVR
DAIARAFSVPSDKVEHAFMVTNDLGIVAAAAKEGGIEALESLGIEINRPIKMMLSQISPD
IDADIRDMKGAAIEWKFDGARVQIHKNGNSVTLFSRKLENVTNSLPDLVEIIRKHVKAES
AILDGEAVAVDENGKPRAFQEILKRFRRKYDVEEKALGIPIQLNLFDIMYLNGRTLIDLP
LVERRKALESCVESSVEDSKSISVDEQVITGDLELVEKIYREALNAGHEGVMVKNPNSAY
SPGKRGKNWLKKKPLMETLDLVVVGAEWGYGRRANLIGSYSVACYDPETSRFLQVGKVGT
GLTDEQLKELTEMLSGLMEGGEAGGVFAIRPKVVLEIAFEEIQKSPNYDSGFALRFPRFI
RIRDDKDPEEADTIQRIGRVYSQQLKRL
NT seq 1707 nt NT seq  +upstreamnt  +downstreamnt
atgacaagcttcagggaatttgcagaaacctgccaggcgattgaaaagatatcgagtact
attgaaaccacaaataaagttgccgacctcctcaaaaaggttgacgtggaagaactgcct
cttgcaactcactttatcatgagtgaagttttccctgcctggagtggagagcaactcggg
atcggcacaagcctgctgtatagttctctctccaaggcttccggaatgtctgtaagaagt
atagaatctcttatccggaccacaggagatatcggggaaaccgcacttcttattttaaag
gagaaaaggaaaaatcaggtgacattttcttctttccttgaggagcagccggaactttca
ataactgaggtttaccagcggttcaaaacagcttccgaagcctcgggaaaaggttctcag
gaactcaaaatcaaaaaccttcagttcctctttaattcctcaactccaagggaagcaaag
tacatttccaggcttgcccttgaagaactccgaataggagtaggagaaggagttgtccgg
gatgcgattgccagagccttttccgtcccttcggataaggtagaacatgccttcatggtc
acaaatgatctggggatagttgctgcagctgccaaggaaggcgggatagaagcccttgag
agtttggggatcgagattaatcgcccaataaaaatgatgctctctcagatcagcccggac
atagatgccgatataagggacatgaagggagctgcaattgaatggaaattcgatggggca
agggtccagatccacaagaatggaaattcggttactcttttttcccgaaagcttgaaaac
gtcacaaactccctccctgaccttgttgaaataatccggaaacatgtaaaggccgagtcc
gcaatccttgacggggaagccgtagctgtggatgaaaacggaaaacccagggcttttcag
gagatccttaagcgcttcaggcgcaaatacgatgtggaagaaaaagctctcggaattcct
atccagctaaatctctttgacattatgtacctgaacggcaggaccctgatcgatcttcct
cttgtcgaacggcgaaaagctcttgagtcctgtgtggagagctcggttgaagactcaaag
tctatctctgtggacgagcaggtgataaccggagatctcgaacttgtggaaaagatctac
agggaagctttgaatgccggacatgaaggtgtcatggtcaaaaacccgaactcggcatat
tccccgggcaaacgcggcaaaaactggctgaagaaaaaaccccttatggaaactcttgac
cttgtggttgtgggagcagaatggggctacgggcgcagggcaaacctgatcggttcatat
tcggttgcctgctacgaccccgagacctcacgcttcctgcaggtcggcaaggttggcacc
gggcttaccgatgagcagttgaaggaacttacggaaatgctctcaggcctgatggaaggc
ggagaagccggaggagtctttgctataagaccgaaggttgttctggaaatcgcttttgag
gaaatccagaaaagccccaactacgactcgggctttgcactgcgtttcccccgctttatc
cgcatccgggacgataaagaccccgaagaagccgataccatccagcggatcgggcgcgtc
tacagtcagcaattaaaaagactttaa

DBGET integrated database retrieval system