Magnetospirillum sp. XM-1: XM1_1389
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Entry
XM1_1389 CDS
T04231
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, thiamin-requiring(Dehydrogenase, E1 component,235-551;Transketolase-like, pyrimidine-binding domain,621-817)
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00020
Citrate cycle (TCA cycle)
magx00785
Lipoic acid metabolism
magx01100
Metabolic pathways
magx01110
Biosynthesis of secondary metabolites
magx01120
Microbial metabolism in diverse environments
magx01200
Carbon metabolism
magx01210
2-Oxocarboxylic acid metabolism
Module
magx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
magx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XM1_1389 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XM1_1389 (sucA)
Enzymes [BR:
magx01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
XM1_1389 (sucA)
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GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
DUF501
Motif
Other DBs
NCBI-ProteinID:
CUW38458
UniProt:
A0A0U5MES6
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All DBs
Position
I:complement(1358197..1361166)
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AA seq
989 aa
AA seq
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MTKQFDESSFLSGGNAVFIAELYARYLEDPASVDASWVSFFQDLKDDGSQLIQDFKGTAS
ARRDVKIIGAIDPEAAAAAAAAAKKAGKDGAKAPAAAPSVDPAAIRQGQIDSIRALMLIR
SYRVRGHLMAKLDPLDLTKREQHPELDYRTYGFTDADLDREIFIDHVLGLETATLRSIVS
IVQETYCSNIGVEFMHIQDPDQKAWIQKRIESIHNRTDFTPRGKTAILERLTEAEGFERF
LQMKYTGTKRFGLEGGESVIPALEQILKRGSQLGVDEVVLGMAHRGRLNVLANFMKKPYQ
AIFSEFQGNAANPEDVQGSGDVKYHLGTSADRDFDGKTVHLSLMPNPSHLEVVGPLVVGK
VRAKQTQFGDTERKRVMGIILHGDAAFAGQGVVPEVMLLSQLKGYATGGTMHIIVNNQIG
FTTAPQYSRSGPYSSDVAKGFQAPVFHVNGDDPEAVVHVARIATEFRQEFGADVVLDMIC
YRRHGHNESDEPAFTQPQMYRKIAAHPTTRALYSEKLVAEGTISRYEADAIFANFQARLE
GDYEAAKSFKVNKADWLEGKWQGLVQLSEEEEFREEKTGVAADILREVGHALAKTPEGFN
VNRKIVRQLAAKKDMVDTGEGIDWATAEALAFGTLLVEGNPVRLSGQDCGRGTFSQRHCR
LTDQETEERIEPLNHIRPGNQAYFEVMDSPLSEEAVLGFEYGYSQAEPNTLTLWEGQFGD
FANGAQVIIDQFINSGESKWLRMSGLVMLLPHGYEGQGPEHSSARWERYLQLSAEDNWQV
CNITTPANYFHALRRQLRRNFRKPLIIMTPKSLLRHKLCVSKLDDLVTGSRFRRVLPETE
TLVADAKIRRVLMCSGKVYYDLLEERTKRGLKDVAIIRVEQLYPWPKDTIKAQLARYPNA
ELLWVQEEPANMGPWTFVDRRIEFICEELDIKARKALYCGRRAAASPATGLYKTHVAEQE
WITGMALTGELVTLPQPFRRASKLSRLTA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcagttcgacgaatcgtcctttctgagcggcggcaacgccgtcttcatcgcc
gagctttacgcccgctacctggaagaccccgcgtcggtcgacgcctcgtgggtttccttc
tttcaggatctgaaggacgacggctcgcagctcattcaggacttcaaaggcaccgccagc
gcgcggcgcgacgtcaagatcatcggcgccatcgatcccgaggccgccgcagccgccgcg
gccgccgccaagaaggcgggcaaggacggggccaaggctcccgccgccgcgccctccgtc
gatccggccgccatccgccagggccagatcgattcgatccgcgccctgatgctgatccgc
agctaccgcgtgcgcggccatctgatggccaagctcgacccgctggacctcaccaagcgc
gagcagcaccccgagctggactaccgcacctacggcttcaccgatgccgatctcgaccgc
gagatcttcatcgaccacgtgctgggcctggagaccgccacgctgcgctccatcgtcagc
atcgtgcaggaaacctactgctcgaacatcggcgtcgagttcatgcacatccaggacccc
gaccagaaggcctggattcagaagcgcatcgaatcgatccataaccgcaccgacttcacg
ccgcgcggcaagaccgccatcctggagcgcctgaccgaggccgagggcttcgagcgcttc
ttgcagatgaagtacaccggcaccaagcgcttcggcctggaaggcggcgagtccgtcatt
cccgcgctggaacagatcctgaagcgcggctcgcagctgggcgtcgacgaggtggtgctg
ggcatggcccaccgtggccgcctcaacgtgctggccaatttcatgaagaagccctaccag
gccatcttctcggaattccagggcaacgccgccaacccggaagacgtccagggctcgggc
gacgtgaagtaccacctgggcacctcggccgaccgcgacttcgacggcaagaccgtccac
ctgtcgctgatgcccaatcccagccacctggaagtggtcggcccgctggtggtcggcaag
gtccgcgccaagcagacccagttcggcgataccgagcgcaagcgggtgatgggcatcatc
ctgcacggcgacgccgccttcgccggccagggcgtggtgcccgaggtgatgttgctgtcg
cagctcaagggctacgccaccggcggcaccatgcacatcatcgtcaacaaccagatcggc
ttcaccaccgcgccgcagtattcgcgctccggcccgtattcgtcggacgtggccaagggc
ttccaggccccggtgttccacgtcaacggcgatgatcccgaagccgtggtccacgtggcc
cgcatcgccaccgagttccgccaggaattcggcgccgacgtggtgctggacatgatctgc
taccgccgtcacggccacaacgagtcggacgagccggccttcacccagccgcagatgtac
cgcaagatcgccgctcaccccaccacccgcgctctgtattccgagaagctggtggccgag
ggcaccatctcgcgctacgaggccgacgccatcttcgccaacttccaggcccgcctggaa
ggcgattacgaagcggccaagagcttcaaggtcaacaaggccgactggcttgaaggcaag
tggcagggcctggtgcagctgtccgaggaagaggagttccgcgaggagaagaccggcgtg
gccgccgacatccttcgggaagtcggccacgccctggccaagacccccgagggcttcaac
gtcaaccgcaagatcgtccgccagctggccgccaagaaggacatggtggacacgggcgag
ggcatcgactgggcaaccgccgaggccttggccttcggcaccctgctggtggagggcaac
cccgtccgcctgtcgggccaggattgcggccgcggcaccttctcgcagcgtcactgccgc
ctgaccgaccaggagaccgaggagcgcatcgagcccctgaaccacatccgcccgggcaac
caggcctatttcgaggtcatggatagcccgctgtcggaagaggcggttctgggcttcgaa
tatggctactcccaggccgagcccaacacgctcaccctgtgggaaggccagttcggcgac
ttcgccaacggcgcccaggtgatcatcgaccagttcatcaactcgggcgagtccaagtgg
ctgcgcatgtcgggtctggtgatgctgctgccccacggctatgaaggccagggtccggag
cattcgtcggcccgctgggaacgctatctccagctctccgccgaggacaactggcaggtc
tgcaacatcaccacgccggccaactacttccacgctctgcgccgtcagctgcgccgcaat
ttcaggaagccgctgatcatcatgacgccgaagtcgttgctgcgtcacaagctgtgcgtc
tccaagctggacgatctggtcaccggttcgcgcttccgccgcgtgctgcccgagaccgag
acgctggtggccgatgccaagatccgccgggtgctgatgtgctcgggcaaggtctattac
gatctgctggaggagcgcaccaagcgcggcctcaaggacgtggccatcatccgcgtcgag
cagctctatccctggcccaaggacaccatcaaggcccagctggcccgctatcccaacgcc
gaattgctgtgggtgcaggaagagccggccaatatggggccgtggaccttcgtcgaccgc
cgtatcgagttcatctgcgaagagctcgacatcaaggcgaggaaggccctgtactgcgga
cgccgcgccgccgcgtcgcccgccaccggcctctacaagacccacgtggcagagcaggaa
tggatcaccggcatggcattgaccggtgaactggtcaccctgccccagcccttccgccgt
gcctccaaactctcgcgcctgaccgcctaa
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