Magnetospirillum sp. XM-1: XM1_3861
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Entry
XM1_3861 CDS
T04231
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
magx
Magnetospirillum sp. XM-1
Pathway
magx00970
Aminoacyl-tRNA biosynthesis
magx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
XM1_3861 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
magx03029
]
XM1_3861 (gatB)
Enzymes [BR:
magx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
XM1_3861 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
XM1_3861 (gatB)
Mitochondrial biogenesis [BR:
magx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
XM1_3861 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
CUW40922
UniProt:
A0A0U5MLT7
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All DBs
Position
I:3859447..3860904
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AA seq
485 aa
AA seq
DB search
MAYIIQGDTGDWEIVIGLEVHAQVISKAKLFSGAATDFGAEPNTQVSFIDAGFPGMLPVI
NEICVEQAVRTGLGLKAKINLTSVFARKNYFYADLPQGYQISQFDQPIVGEGELILDLPD
GGTRTVGIERLHLEQDAGKSIHDMHPSKSFIDLNRSGVALMEIVSKPDLRSPEEAGLYLT
KLRSILRYLGTCDGNMQEGSMRCDANVSVRPVGSTELRTRCEIKNVNSIRFVQQAIEYEA
RRHIDVYETGGEIRQETRLFDSVKGETRSMRSKEHAHDYRYFPDPDLLPLVIQQSFVDGI
KAGLPELPDEKKARFMAEYGLNSYDAGVLVAEKASAEFFETVAKGRDSKIACNWVMGDFF
ASLNATGKTIEDPPVTAANLGQLIDLIKDGTLSGRLAKDVFALMVETGKAPAVLVEERGL
RQVTDTGAIEAAVDAAISANPDKVQQVKDGKTALLGWFTGQVMKATQGKANPAMVNEMLS
KKILG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacatcattcagggcgacaccggcgattgggagatcgtcatcggtctcgaggtt
cacgcccaggtcatctccaaggccaagctgttttccggcgccgccaccgatttcggcgcc
gagcccaacacccaggtcagcttcatcgacgcgggcttccccggcatgctgccggtgatc
aacgaaatctgcgtcgagcaggcggtgcgcaccggcttagggctcaaggccaagatcaac
ctgacaagcgtgttcgcgcgtaagaactacttctacgccgacctgccccagggctatcag
atcagccagttcgaccagcccatcgtcggcgagggcgagctgatcctcgacctgcccgac
ggcggcacccgcacggtgggcatcgagcgcctgcacctggagcaggacgccggcaagtcc
atccacgacatgcatccgtcgaagtcgttcatcgacctcaaccgttcgggcgtggcgctg
atggagatcgtctccaagcccgacctgcgctcgccggaagaggccggtctgtacctgacc
aagctgcgctccatcctgcgctatctcggcacctgcgacggcaacatgcaggaaggcagc
atgcgctgcgacgccaacgtgtcggtgcgccccgtgggctcgaccgagcttcgcacccgc
tgcgagatcaagaacgtcaactccatccgcttcgtccagcaggccatcgagtacgaggca
aggcgccacatcgacgtctatgaaaccggcggcgagatcaggcaggagacccgcctgttc
gattcggtcaagggcgagacgcgctccatgcgctccaaggagcatgcccacgactaccgc
tacttccccgatcccgacctgctgcctttggtgatccagcagtccttcgtggacggcatc
aaggccggcctgcccgaactgcccgacgagaagaaggcccgcttcatggcggaatacggc
ctcaactcctatgacgccggcgtgctggtggcggagaaggcctcggccgagttcttcgag
accgtggccaagggccgcgattccaagatcgcctgcaactgggtgatgggcgacttcttc
gcgtcgctcaacgccacgggcaagaccatcgaggacccgccggtgaccgccgccaatctg
ggccagctcatcgacctgatcaaggacgggacgctgtcgggccgcctggccaaggacgtc
ttcgccctgatggtggaaaccggcaaggcccccgccgtgctggtcgaggaacgcggcctg
cgccaagtcaccgacaccggcgccatcgaggcggcggtggacgcggcgatcagcgccaac
ccggacaaggtccagcaggtcaaggacggcaagaccgccctgctcggctggttcaccggc
caggtgatgaaggcgacccagggcaaggccaacccggccatggtcaacgagatgctgtcc
aagaagatcctgggctag
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