Micavibrio aeruginosavorus ARL-13: MICA_372
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Entry
MICA_372 CDS
T01630
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mai
Micavibrio aeruginosavorus ARL-13
Pathway
mai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MICA_372 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mai03400
]
MICA_372 (mutM)
Enzymes [BR:
mai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MICA_372 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MICA_372 (mutM)
DNA repair and recombination proteins [BR:
mai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MICA_372 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5830
zinc-ribbons_6
NFACT_N
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AEP08717
UniProt:
G2KR65
LinkDB
All DBs
Position
396650..397486
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AA seq
278 aa
AA seq
DB search
MPELPEVETVCRGLAKPFTGQIIASAHVRRPDLRRPFPRGLVKNITGRKIASVTRRAKYA
LLNMDDGSVLVLHLGMSGRVKILPPAQARVYKPETHDHFLFTSARGHMMVLNDARRFGQV
MWFKSEDVMAKDPSFATLGPEPLSNEFSGPALLAALAGKKTAIKVALLDQRVVAGIGNIY
ASEALYIAGIKPTRAAGSIRADEAEALVAAIRQILTKAIESGGSSLRDHRQTNGEMGYFQ
FEFAVYDREGDGCARCGKPIQRLVQGGRSTFYCPACQK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagttgaaacggtttgtcgcggtctggccaagccttttaccggg
cagattattgcctccgcacacgtgcgccgcccggatttgcgccgtccatttccgcgtggc
ctggtgaaaaatattaccggtcgtaaaattgcgtcggtgacgcggcgggcgaaatacgcg
ctgctgaatatggatgatggatccgtgctggttctgcatctgggcatgtcggggcgcgta
aaaattctgcctccggcacaggcccgcgtgtataaacccgaaacacacgaccatttttta
tttacctcggcgcgggggcacatgatggtgctgaacgatgcgcgccgtttcgggcaggtg
atgtggttcaaatccgaggatgtgatggcgaaagatccgtcctttgccacgttggggcca
gagcccttgtcgaatgaattcagtggtccggccctgctggcggcgctggcgggaaagaaa
accgcaattaaggtcgcgttactggatcagcgtgttgttgcggggatcggtaatatttat
gccagcgaggcgctctacatcgcggggatcaaaccgacccgtgcagcgggatcaatccgc
gctgatgaggcggaggcgctggtcgccgccatccgccagattttgaccaaagcgatcgaa
tcggggggatcgtccctgcgggatcatcgtcagacgaatggcgaaatgggctattttcaa
tttgaatttgccgtctatgatcgcgaaggggatggttgcgcccgctgcgggaaacccatt
cagcgtttggtccagggtggccggtcgaccttttattgtcccgcctgtcagaagtga
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