Megalobrama amblycephala (Wuchang bream): 125245074
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Entry
125245074 CDS
T08212
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125245074
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125245074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
Mitofilin
V_ATPase_I
eIF-4B
DUF5446
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
125245074
NCBI-ProteinID:
XP_048011476
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Position
LG14:31670469..31680407
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AA seq
552 aa
AA seq
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MAEARISVDQNEFLCPVCLDLLKDPVTTSCGHSYCKICITDCWDQEDQKRVYSCPQCRQT
FSPRPALAKNTMLAEVVEKLKKTKLPADCYAGAGDVQCDVCTGRKHKAVKSCLVCLESYC
QTHFDRHEEFHSRKPHKVTEATGRLQEMICQKHDKILEVFCRTDQKCICVLCTMDEHKNH
NTVSAAAQRTEKQKQLKETQRSFQQRIQQREKDLQQLREAVESHKRSAQTAVEDNERIFT
ELFRSIERSRSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIH
FLQSFQSLSAPPESTDVNDNPFSVLSSFDGVRKSVHQLRDKLEAFCKEELKKISDRVTFT
NMSLSPPTVPRSRKDFLQYSHQLTLDLNTVNKHLHLSERNRVITVILTEQPYPDHPDRFD
GYNQQVLCRESVCRRCYWEIEWSGDVYISVSYKSISRKGSGKECVFGSNDQSWSLICSSS
RYALRQNQIETKLPVKPISRRIGVYVDHSAGTLSFHSVSGDTMSLIHTVHTKFTQTLYPG
FRVYNGSSVKLC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttcagtggatcagaatgagttcctgtgtccagtgtgtctggat
ctcctgaaggatccagtgaccacttcctgtggacacagttactgtaagatctgtattaca
gactgctgggatcaggaggatcagaagagagtctacagctgccctcagtgcagacagacc
ttcagtccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactg
aagaagactaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtc
tgtactggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctggagtcttactgt
cagactcattttgaccgtcatgaggaatttcactcacgtaagccacataaagtgactgaa
gccactggacgactgcaggagatgatctgccagaaacacgacaagatccttgaggttttc
tgccgcactgatcagaagtgtatatgtgtgctgtgtacgatggatgaacataaaaaccac
aacactgtatcagctgcagcacagaggacagagaaacagaaacagctgaaggagacacag
aggtcgttccagcagaggatccagcagagagagaaagatcttcagcagctgagagaggct
gtggagtctcataagcgctctgcacagacagcagtggaggacaatgagaggatcttcact
gagctcttccgctccattgagagaagccgctctgaggccacacagcggatcagagatcag
gaaaagactgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaat
gatctgaggaggagagacgctgagctggagcagctttcacacacacaggatcacatccat
ttcctgcagagtttccagtctctctcagctcctcctgaatctacagatgtaaatgacaat
cccttcagtgttctctcctcttttgatggcgtgagaaaatctgtccatcagctgagagac
aaactggaggctttctgcaaagaggagctcaagaagatctctgacagagtcactttcacc
aacatgtcactttcaccaccaactgttcccaggagcaggaaggacttcttacaatattct
catcagctaactctggatctgaacacagtgaataaacacctccatctgtctgagaggaac
agagtgattactgtcattctcacagagcagccgtatcctgatcatccagacagatttgat
ggatataatcagcaagtgttgtgtagagagagtgtgtgtagacgctgttactgggagatt
gagtggagtggtgacgtatatatatcagtgtcatataagagcatcagcaggaagggatcg
ggtaaagagtgtgtgtttggatctaatgatcagtcctggagtttgatctgctcttcctct
agatatgcattaagacaaaatcagatagagactaaactcccagtaaagcccatcagccgt
cgaataggagtgtatgtggatcacagtgcgggaactctgtctttccacagcgtctctggg
gacacaatgagcctcatccacacagtccacaccaaattcacccagacactctatcctggg
tttagggtttataatggatcatcagtaaaactgtgttga
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