Megalobrama amblycephala (Wuchang bream): 125266541
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Entry
125266541 CDS
T08212
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125266541
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125266541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
U-box
zf-RING_2
zf-RING_5
zf-RING_6
TssC
PHP
DUF4239
MRP-S31
DUF5446
Motif
Other DBs
NCBI-GeneID:
125266541
NCBI-ProteinID:
XP_048043272
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All DBs
Position
LG1:27997786..28003382
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AA seq
542 aa
AA seq
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MAEARISQDEFTCPVCLDLLKDPVAIPCGHSYCKSCITDCWDQEDEKRVYSCPQCRQTFS
PRPALAKNTILAEMVEKLKKTKLAADCYAGAGDVQCDVCTGRKYKAVKSCLVCLESFCQT
HYDRHEEYHSRKPHKVIDATGRLQDMICPKHDKELEMYCITDQQCICVWCKEPELKNHNT
VSTAAQRTEKQKQLKETQIKIRQRIQQRQKDLQQLREAVESHKRSAQTAVEDSEKIFTEL
IRSIERSRSEVTQLIRDQEKDAVSRAEGRLERLEQEINDLRRRDTELEQLSHTHDHIHFL
QSFQSLSAPPESTDEPDDPFSSLSSFDGMRESVRQLRDKLEDFCKEEIKKISDRVTFPNM
NPKTRNNFLQYSHQLTLDLNTVNKRLRLSERNRVITDTDTKQSYPDHPDRFDVWYQVLCR
ESVCGRCYWEIEWSGRVYISVSYKSISRKGGGLECVFGYNDQSWSLNCSSSSYSFYHNKI
KTDLPVKSISSRIGVYVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFYVYTGSSVK
LC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttcacaggatgagttcacgtgtccagtgtgtctggatctcctg
aaggatccagtggccattccctgtggacacagttactgtaagagctgtattacagactgc
tgggatcaggaggatgagaagagagtctacagctgtcctcagtgcagacagaccttcagt
ccaagacctgctttagctaaaaacaccattctggctgaaatggtggagaaactgaagaag
actaaacttgctgctgactgttacgctggagctggagacgtgcagtgtgacgtctgtact
ggaagaaaatacaaagccgtcaagtcctgtctggtgtgtctggagtctttctgtcaaact
cattatgaccgtcatgaggaatatcactctcgtaaaccacacaaagtgattgatgccact
ggacgactgcaggacatgatctgccctaaacacgataaagagctagaaatgtactgtatc
actgatcaacagtgcatctgtgtgtggtgtaaggagcctgaacttaaaaaccacaacact
gtatcaactgcagcacagaggacagagaaacagaaacagctgaaggagacgcagataaag
atccgtcagagaatccagcagagacagaaagatcttcagcagctgagagaggctgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaagatctttactgagctc
atccgctccattgagagaagccgctctgaggtcacacagctgatcagagatcaggaaaag
gatgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacactgagctggagcagctttcacacacacatgatcacatccatttcctg
cagagtttccagtctctctcagcacctcctgaatctacagatgaacctgacgatcccttc
agttctctctcctcttttgatggcatgagagaatctgtccgtcaactgagagacaaactg
gaggatttctgcaaagaggagatcaagaagatctctgacagagtcacattccccaacatg
aatcccaagaccaggaataacttcctacagtattcccatcagctcactctggatctgaac
actgtgaataaacgcctccgtctgtctgagaggaacagagtgattactgacactgacaca
aagcagtcgtatcctgatcatccagacagatttgatgtttggtatcaagtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagattgagtggagtggacgtgtgtatatctca
gtgtcatataagagcatcagcaggaagggagggggtcttgagtgtgtgtttggatataat
gatcagtcctggagtttgaactgctcttcctccagttactcattctatcacaataagata
aagactgatctccctgtaaagtctatcagctctagaataggagtgtatgtggatcacagt
gcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacacagtccag
accacattcactcagccgctctatcctgggttttatgtttatactggatcatcagtgaaa
ctgtgttga
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