Megalobrama amblycephala (Wuchang bream): 125273951
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Entry
125273951 CDS
T08212
Symbol
shroom2a
Name
(RefSeq) protein Shroom2 isoform X1
KO
K18625
protein Shroom
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125273951 (shroom2a)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125273951 (shroom2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
125273951
NCBI-ProteinID:
XP_048055769
LinkDB
All DBs
Position
LG8:18524883..18577357
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AA seq
1658 aa
AA seq
DB search
MDTINQYSGFPEGDHRIFYSSDRSGSFDEHHGNGEGWKVVDVTLSGGAPWGFTLRGGLEH
GEPLLITKVEEGSKAATARLQAGDELININDISLSGYRQEAICLVKGSHKTLSLVVKRRN
EPMSRPHSWHATKFNENHTEAKTQSTPSPVWQTRYDASSFSSELSTGWEQTNLQRVSDQF
SSLGSMDSLEHSSHPYPPGCLSPSKSNNNSTEHLGGGKRDSAYSSFSTSSGTPDYTLSKS
NAASTENMLYKINQWDSSGRHSNGRHSQNLNEGVRQDERLGYLQHLSSTVNHEIPRAEEQ
PGTRHSNSGRVSIGPVWHVPDMKKNMVSCTPPPTPPTRSDSFAATKVHEKGLITGTSEGL
GVHAQLKPQVKALQKAGETYESTQRSYQVFETGLEGRRDFNLPSKNDSSNSCISSNAYHP
KRISSDKTYSLSTTDVRDRHPSYAHVPYHPRQYSDEGTFHAQTRTVPAVNPPFSGYFSSM
QELPTNNHMQLNSQNQARRPAASLCGLFGVTSHHITQGMTQVSLVRVDDSKASAVSEISH
SGRDRMSIGSQGGTKDRYFPPQSQHHDTDHKDNNASFKQSDNHHRLSSAPCNPLNMPDST
KPSELRGSQKQHYMSSSDEHSSSYPHSKQPEHRRNAGHLHHKEYSQQTKSETKICPQKTP
MLYSLAQERNDMDDCQDEINSGSSEQEAIDSQSSKQARRSDRFATTLRNEIQMRRAQLQK
SRSAATLESPVEAVEEAAVWKTTSPSTDGLHFSSSYKDHLKEAQARVLQATSFRRKDLEP
VLFEHPGTEGSTWNDTTPLPSVSEVPPSKPISGSNQVLRIGSRKRFSAEKKVRSFSEPDK
IHEVGADERSPMPDNAVPLENRYRFFEATGKAAFPKPMPKQSMQISEDNRLSKTGGMHYS
AKSDTAGRSNSDSSTPIEQHLNEGQDGPLSVNRQAMLEQQRLGTFAEYEAKWNTQRKTTE
PRVSGRYHSADNILDTGKEGQRKPSCVHERSRSSPSADFYGQKLPVQEKKTADYSKPEKN
LSEQEKNSTRLNEKGYSELVCKEKLEAPPSALTEDLEKNTLDPLSSHHKPALHFSDHSTQ
SEPSALSKNKSSVLLPHLEKYKCPEGTPPPLSNFQEVQPGSQGGVLASLSPVNNQSSASV
SAPVPWKGLEHSKGPIGEEELQQELVPPPFPPPPPPAVLPTQQTAGPTQPTMDGQRSPSP
QFAPQRLTDKPPVSVSIQDEAPGRMDRVKDENTSVKKVPIKIVHSERNTEKEGRQYLDLP
SETPVSSQEPGVTHLQSLGNPDQSYSLFCTYTRQKDQGPEPRDTDMGPLKDQVPQTNVNP
IFNELHGLQTSPSLDQSSNGLSSHPLQSEDDEKRKELARDIMDKDKSLVDILDQSKMKTT
MDLMEGIFPQGEQLLEEAQQRRKAAPKQLSPRNSVEKKEEDNLVVATALVTNSTYYSTSA
PKAELLIMMKDMQEQSVEHNSEEELEEDNENDLANKKHELIDSLSKKLQVLKEAQESLQE
DVQDNNALGEEVEAIVQGVCKPNELDKFRMFVGDLDKVVNLLLSLSGRLARVENALNSLE
EDASQEERHTLTEKRKLLIRQHEDAKELKENLDRRERVVYDILASYLPEESMADYEHFVK
MKSALIIEQRKLEDKIKLGEEQLKCLMDSLPMDQRTTN
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggacactatcaaccaatactccggctttcccgaaggagaccacaggatcttttacagt
tcagacagatctgggagttttgatgaacatcatggtaatggtgagggatggaaagtagtg
gatgtgaccctctctgggggagcaccatggggttttacccttagaggtggactggagcac
ggagagcctcttcttataaccaaggtggaagagggcagtaaggccgcgaccgcaagactg
caggctggagatgaactcatcaacatcaatgacatttctctctccggctacagacaagag
gccatctgtctagtcaagggctcccacaagactctcagcctggtggtgaaaaggagaaat
gaacccatgagcagacctcactcctggcatgccaccaaattcaacgagaaccacacggaa
gccaaaacccagtccacaccctcaccagtctggcaaacaagatatgatgcaagttcattc
tcctctgaactctcaactggctgggagcaaacaaatctacagagagtatctgatcagttc
agctctttggggagtatggacagcctagagcatagctctcatccctatccacctggctgt
ctttccccaagtaagtccaacaataacagcactgaacatttgggtggtggtaaacgagac
tctgcatacagctccttttctacaagctcaggaaccccagattacacactgtctaaaagt
aacgctgcatccactgaaaacatgctgtacaaaattaatcagtgggactcaagtggcagg
cacagcaatggcaggcatagccaaaacttaaacgaaggggtacgacaagatgagaggctt
ggatacttgcagcatctctcaagtacagttaaccatgagatcccaagagctgaagaacag
ccaggaactcggcattcaaactctggaagagttagtattggacctgtctggcatgtcccg
gatatgaagaaaaacatggtatcctgtaccccacctcccactccaccgacacgcagtgat
agttttgcagccaccaaggttcatgaaaagggtctgatcacaggcacctctgagggcctt
ggtgttcatgcccagttaaagcctcaggtgaaagcattacaaaaggctggagaaacctat
gaaagcacacaaaggtcttaccaagtcttcgagacaggtcttgagggtcgacgcgatttt
aacctgccatccaaaaatgattcttcaaattcttgcatttcatccaatgcctatcatccc
aaacgtatatcatcagacaagacatactccctatcaaccacagatgtcagagataggcat
ccatcttatgcccatgttccataccatccacggcagtacagcgacgagggcacttttcac
gctcaaactagaacagtgccagcagtgaatcctccattcagtggctactttagcagtatg
caggagctgcccacaaacaaccacatgcaactaaacagccagaatcaagctagacggcca
gctgcatcactttgtggtctttttggagttacctcccaccatatcactcagggaatgaca
caggtttctttagtgagagttgatgactctaaagcttctgcagtctcagaaatatcacac
agtggacgggacaggatgtccataggttctcaaggaggaactaaagaccgctatttccct
cctcagtcacagcaccatgatacagatcataaggacaataatgcctccttcaaacaaagt
gacaaccaccatcgtctttcatctgctccatgtaatcccttgaatatgcctgattcaaca
aaaccttctgagctgagggggagccaaaagcaacattatatgtctagctcagatgagcat
tctagtagttatccccacagtaagcaacctgagcacaggagaaatgctggccatctccat
cataaagaatactcacaacaaactaaaagcgagacaaagatatgtccccaaaaaacacct
atgttgtattctctggcccaagagcgcaatgacatggatgactgtcaagatgagatcaac
agtggaagttcagaacaggaagccattgacagtcagagcagcaaacaggcaagacggagt
gaccgttttgccaccaccttgcgcaacgagatccagatgagaagggcccagcttcaaaag
agtcgaagcgcagccactttagaaagtccggttgaagctgtagaggaggctgctgtctgg
aagaccacttctccctccacagatggcctccacttttctagctcttataaagaccatctg
aaagaagcccaggccagagtcctccaggctacttcttttaggcgaaaagacctagagcca
gtattgttcgagcatccaggcactgagggttctacttggaatgacacaactccgcttcca
agtgtttccgaagtcccacctagcaaacccatctcagggagtaatcaggtgcttcgcatt
ggtagccgcaagcggttttctgcagaaaagaaagttcgttctttttctgagccagataaa
attcatgaagtaggagctgatgagcgctcccctatgcctgacaatgctgtacctttagaa
aatcggtacagattctttgaagcaacaggaaaagcagctttccctaaacctatgccaaag
caaagcatgcagatatctgaagacaacagactgtccaaaactggaggcatgcactattct
gcaaagagtgacacggcagggcggagtaacagtgatagctcaacccccattgaacagcac
cttaatgaaggtcaggatggcccactctcagtgaaccgacaagccatgctagaacaacag
cgacttggtacctttgcagagtatgaagccaaatggaacacccagaggaagacgactgaa
ccaagggtatctggacgataccactccgctgacaacatccttgatacaggaaaagaggga
cagagaaagcccagctgtgtgcatgaaagatctagatcctccccttctgctgacttctat
ggacagaaacttccagttcaagagaagaagacagctgactattccaaacctgagaaaaat
ctctcagaacaggaaaagaatagtacaaggttaaatgaaaaaggatacagtgaacttgta
tgcaaagagaaactagaagcacctccctcagctttgactgaagacctggagaaaaatact
ttagatcctttgtccagtcatcataaacctgcactgcatttctctgaccatagcactcag
agtgaaccatcagccctctctaaaaacaagagctctgttctcttgccccatctggagaag
tacaaatgccctgagggcacacctcctcctcttagcaattttcaggaggtccagcctgga
tcacaaggaggagttttggcctcactctctcctgtcaacaatcaaagctccgcctcagtt
tcagcccctgttccctggaaggggttggagcatagcaaagggccaatcggggaggaggag
ctacaacaagagcttgtgcctcctccctttccacctcctccccctcccgctgtcctgccc
acccaacaaaccgctggccctacccagcccaccatggatgggcagcgttcgccctcgccc
cagtttgctccccagaggctgactgacaagccccccgtctctgtctccatacaggatgaa
gctcctggaaggatggatagggttaaagatgagaacacatcagtgaagaaagtgcccatt
aagattgtccactcagaacgtaacactgaaaaagaaggtcgacaatatctcgacctgccc
agcgagacccctgtcagctcgcaagaacctggagtaactcatcttcagagcttggggaac
ccggatcagtcatactctttgttctgtacctacaccaggcaaaaggatcaggggcctgaa
ccaagagacacagatatgggccctctgaaagaccaggtgccacaaaccaatgtgaaccca
atattcaatgagttacatggcctgcagacaagcccttcattagatcaaagtagcaacgga
ttgtcttcacatcccttgcagtcagaggacgacgaaaaaagaaaggagctggctagagac
ataatggacaaggacaagtccctagtggacattttagaccagagtaagatgaagacaact
atggatctgatggagggtattttccctcagggagagcagctactggaggaggcccaacag
cgcaggaaagctgcacctaaacagctctctcctcgtaactctgtggagaagaaagaggaa
gacaacctggtggtggctactgctttagtgactaattcaacctactacagtacatctgca
cccaaagcagagctgctgattatgatgaaggacatgcaggaacagagtgtggaacacaac
tcagaagaggagttggaggaggacaatgaaaatgatcttgccaacaagaagcatgagttg
attgacagcctcagcaagaagttgcaggtgctgaaggaagctcaggagagtctacaggag
gatgtgcaggacaacaacgctcttggggaagaggtggaggccatcgttcagggtgtctgc
aagcccaatgaactcgacaagttccgtatgttcgtcggtgaccttgataaagtggtcaac
cttctgctgtctctgtctggacgtttggccagagtagagaatgccctgaacagcctagag
gaagatgcatcacaggaggaaaggcatactctgacagagaaacgcaaactgctgatccgt
caacatgaggacgccaaagagctgaaggagaaccttgacaggagagagcgcgtggtctac
gacatcctggccagctacctgccggaggagagcatggctgattatgagcactttgtgaaa
atgaaatctgcccttattattgagcaacgcaagcttgaggacaagatcaaactgggggag
gagcagctcaagtgtctgatggacagtctcccaatggaccagaggacaactaactaa
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integrated database retrieval system
