Megalobrama amblycephala (Wuchang bream): 125278198
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Entry
125278198 CDS
T08212
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125278198 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125278198 (tprb)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125278198 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
125278198
NCBI-ProteinID:
XP_048063037
LinkDB
All DBs
Position
LG11:complement(27371716..27392671)
Genome browser
AA seq
2360 aa
AA seq
DB search
MAAVLQQILERSEIAKLQKTVLTKLEKYISDQQCEVDCLKAQQEQYRVDSEQQYFDIEKK
FAESQAQFVSQTHEHQILKEEYCKLEEELKCIREKNKEQVSSNAKLESQQNELSKAKDEL
EAEKRELVRTLERRSQEMEHQSEDLKRLNDRLVEVNAEKMQLQLKLDGSEASEVSIKYKE
KRMEQEKDLLQGQVTWLNTELKAKSEELLSLSRQRGNEILELQCNLNNKEDEITHLQDQV
TSLKASNENLQRQAEEMITKMREAKEQQASLEEKFSNELNANIKLSNLYKGAAADAEAKG
EELSRAVEELHKLLKEAGEAHKALEVKMAELEDCKDKEIAELKEKISSQEKELENANELL
SDTKHRGTASILTEEHVTTMSPTAAAVAKIIKPGMKLTEIYTAYVETQEQLQREKLENKR
LHKYLDDIVQEMEAKAPILKRQREEYERMQKSVSSLSAKLEQAVTEVHRLQKEADEGNKR
ASVLERDNQRFEVQLADMAQQVRVLLIELEEARGNHVMREEDEVCSADVSSTSEVISQHL
VTFRSVEELQQQNQRLLVALRDLSEAKEKDELEVDTMKRSEVEKYLEDLQRELEQLKEKR
AQDLQKVDTVARQRDMFRMLLTQATGVSFPQGAGSEELMLTSTPRRSPAVTPTAGTPTGL
VATAIESTESVEAKAALKQLQEIFVTYKKEKTESEKALIEQSEKLQDQVTELRSENTKIS
TQLEFTSKRYEMLQDNVEGYRKEIASLNEKTQKQAAAIQQNEQTIHTLTQDRRATAEKLT
IAESEAENLRKERDMLKMVEIRLTQEKEIFQAQQLGQNMLLTNLKSIQATLERSETETRQ
RLTAQIEKQEREIAQLQKRLENEVEQKHLLTRNQDMQLMDAKKQLETQTAQHHRTREQLS
AAQLELNKLRLQISSGESRLVSHTVHTGLQGSEGDMEALRAQLKQAENKVEELAERLKNT
TASMEQYKAMSLSLEESLDKEKQVTEQVRSSVETQMESAQEQYKQLEQKLLEMDKEKQSL
QEEKSKAVAAVEEELSELRKTLSSLQADHQSALERASVAAAQEQQAILDSQQQAKMAAEA
QDKYEREMLLHAADVEALQAAKAQALQAALLKQQLEEKVQSTSAQLLESRVSWEEQEKIL
KEDQCKLVSHCEDLQRQNTLLHEQIQTLSGQMASQMQRAANESPLNISLTEEGKSQEQLL
EILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQESLSAERERMQVTAKTLS
QHDELMKKTETMNVLMETNKMLREEKEKLEQELQDTQAKVRKLESDILPMQESNAELSEK
SGMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEREAHLKRIQQLVEETSR
LKADASRSSGTLTMLQSQVQNLRENLGKVMVERDNLKKDQEAKNLDIQEKMKTITQVKKI
GRRYKTQYEELKVEYDKLVAAAASAPAQDQEAQQASAQELQGLKESLNQSENRTRELEGH
LENLNRTVGEREAEARGAQEQASRLQGELTRLRQELQEKSSQEERLKQQLTEKEERTKKA
IVMAKQKISQLTGVKGQLLKENEELKQQKEELEVRVSALKSQYEGRLSRQERELRDLREQ
QERHGEQRDEPAEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLA
ATPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSEGPLEHV
TVYGSASGSVRSTSPNVQTTLAQPLLNVQQQSQATAFIQPTQQQTQPPAEPSNQEPPAAV
MLPTSQIDRPLSTSTGLWSATASTSSANAVTASPSNALSKRPREEEQESMSADTQSQDEP
SDTPICKRVRIHRVGLEEEILAEDSTEAESVVPGDNQEAPDAGQELESYATLEMMDEEPG
PSQSVPGDRLLPHSSDTHQSPNEPDHHVIVIVSDTDSEGDHEDESEEEEEEEEEEQDYEE
EDEEEEEEDDDDEEDGGIGEEGEESNEGSGSRDGNEAYEGDDTEVPDPTDPGTETEESLG
ATDSTQRMADSQSFETSTLDVFDAPVTSSASRPPQSPRRPQHPLPPRLNILAPSAQDLGP
PAQVQRLPVRRQSVGRGLQLTPGMASSAQQQHFFEDDDRMVPSTPTLIPPRSDGFAEAIH
SPQVAGVSRFRFGPSDDLPQTSSSHSDLGQLPSQGLGMYDSSVFLGAHEEESGGRSVPTT
PLQIAAPVTILSETVPSETNEHASQSVPMVSTSTPGLSAPAGPSGVEERDDMFMDGGDSA
EASLEAVSQTEAEEPAQTSDEASLPSTSQEPSSSSADTSSSQPPKARTGSGRQWTSGRGS
RSFVKRGGAGVMGVRGRFAR
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcaaatattggagcggtcggagatagcgaaactccaaaaaact
gtcttgactaaattagagaagtacatttctgaccagcaatgtgaagttgattgtctgaag
gcacaacaggagcaatatcgtgtggatagtgaacaacaatattttgacatcgagaagaag
ttcgctgagagtcaagctcagtttgtgtcccagacccatgagcaccaaatactgaaagaa
gagtattgcaaactggaggaagagctgaaatgcatacgagagaaaaataaggagcaagtg
tcttcaaacgccaaactagaatcacaacagaatgaactttctaaagccaaagatgagctt
gaggcggaaaaacgagagcttgtacggacattggaaagaagatcgcaggagatggaacac
caaagcgaggacctgaagcgtcttaatgatagattggtggaagtcaatgcagagaagatg
cagcttcagctaaaactggatgggtccgaagcttctgaggtctcaatcaagtataaagag
aagcgaatggaacaggagaaagatctactccagggtcaagtaacctggctgaacactgag
cttaaggctaagagcgaagagctgctgtctctttcccggcagagaggcaatgagatactg
gagctccaatgcaaccttaataacaaggaggatgagatcacccacctccaagatcaggtg
accagtctgaaagcgtccaatgagaaccttcagaggcaagcagaggaaatgatcaccaag
atgagagaggcaaaagaacagcaagccagtttggaggagaagttcagtaatgaactcaat
gccaacatcaagctctcaaatttgtataagggagcagcagctgatgccgaggccaagggt
gaggagctgagcagagcagttgaggaacttcacaagctgcttaaagaggctggggaggcg
cacaaagctctggaagtaaagatggcagagctggaggattgtaaggataaggaaatcgct
gaactgaaagagaaaataagcagccaggagaaagagctggaaaatgcaaatgagctgctg
tctgacaccaaacacagaggaactgcttcaattcttacagaggagcatgtgacaacgatg
tcccccactgcagctgcagttgccaaaatcatcaaaccaggcatgaaactcacagagata
tatacagcatatgtcgaaactcaagaacaactacaacgggagaaactagaaaacaaacga
ctgcacaagtatctggatgacattgtgcaagagatggaggcaaaggcacccatcctgaag
agacagagagaggagtacgagcgcatgcaaaagtctgtttccagtctctctgctaaacta
gagcaagctgtcacggaggtccaccgcttgcagaaagaagcagatgaaggcaacaaacgt
gcatctgtgttggagagagataaccagaggtttgaggtgcagttggctgacatggctcaa
caggtgcgggttctcctcattgagctggaggaagcacgtggtaaccatgtgatgcgtgag
gaagatgaagtgtgttcggcggatgtgagcagcacttcagaggtgatttctcagcacctg
gtcaccttccgcagcgttgaagagctgcagcagcagaaccagcgactcctagtggcactc
agagacctcagtgaggcaaaggagaaggatgagttggaggtagacaccatgaaacgcagt
gaggtggagaaatatctcgaggatcttcagcgtgaactggagcagctcaaggaaaagaga
gcccaggacctgcagaaggttgacactgtggcacgacagagggacatgttccgcatgctt
ctgactcaggccactggagtctccttcccacagggtgctggttctgaggagcttatgctg
acctccactccccgccgttctccagccgtcacacctactgcaggcacccctacaggactg
gttgccacggcgatagaatctactgagtcagtagaggccaaggctgcactgaagcagctt
caggaaatctttgtgacctataagaaggaaaaaacagagtctgaaaaggctctgattgag
caaagtgagaaactacaggatcaagtaactgaactccgctccgaaaacaccaagatttct
acacagctggagttcacctccaaacggtatgagatgctccaggataatgtggagggctac
cgtaaggagattgcttctctgaatgagaagactcagaaacaggctgcagcaattcagcag
aacgaacagaccatacacaccctcacgcaggatcggcgagcaacagccgagaaactcacc
attgctgagtctgaagcagagaacctgcgtaaagagagagacatgctgaagatggtggag
atcagactgacccaggagaaagagatcttccaggcccaacagctcggccagaacatgctg
ctcaccaacctcaaatcaatacaggcaactctagagcgatcagagactgagaccagacaa
cggctgactgctcagattgagaagcaggagcgagagattgctcagctccagaagagactc
gagaatgaggtggaacagaagcacctgctgacacgcaatcaagacatgcagctgatggat
gctaagaagcagcttgaaacacaaacagcccagcaccacaggacaagagaacagcttagt
gctgctcaacttgagcttaacaaactgaggctgcagatcagtagtggggagagccggctg
gtgtcccacacagtacatacaggcctgcagggcagtgagggggacatggaggctctgcgt
gcccagctgaagcaggctgagaacaaggtagaagagctggccgagcgactgaagaacacc
actgccagtatggagcagtacaaagccatgagccttagcctggaggagtccctagataaa
gagaaacaggtaaccgagcaggtgcgttcatctgtggaaacccagatggagtcggctcaa
gagcagtataaacagctggagcagaaacttctagagatggacaaggagaagcagagcttg
caggaagagaaaagcaaagctgttgctgctgtggaagaagagctaagcgagctgaggaaa
actctgagcagcctgcaggcagatcaccagagtgccttggagagagcttctgttgctgct
gcacaggagcagcaggccatcctggacagtcagcagcaggctaagatggcagctgaggcg
caggataaatatgagagggagatgttgctgcatgctgccgatgtggaagcattgcaggct
gccaaagctcaggctctgcaggcagctctactcaaacagcagctggaggagaaagttcag
agcaccagcgcacagctgctggagtctcgtgtctcctgggaagagcaagagaagattctc
aaggaggaccagtgtaagttagtctctcactgtgaagatctgcagaggcagaacacactc
ctccatgagcagatacagactctgagtggacagatggccagtcaaatgcagcgagccgcc
aatgagagtccgctgaacatctctctgactgaggagggcaagtctcaggagcagctcctg
gagatactcaggtttgtgcgacgagagaaagagatagcagagtctcggtttgaggtggtc
cagggggagagtctgaggcacaggctgagagtggagcatctggagagagagctgaaggat
gttcaggagagtctaagtgcagagagagagaggatgcaggtgactgcaaagactctgtcc
cagcatgatgagctgatgaagaagacagagaccatgaatgtgctaatggagaccaataag
atgctgagggaggagaaagagaaactggagcaggagctgcaggatactcaagccaaggtg
cggaaactggagtcggatatcttacctatgcaggagtccaatgcagagctcagtgagaag
agtggtatgctacaggcagagaagaagcttctggaagaagacatcaaacgctggaaagct
cgcactcagcacctggtgagccagcagaaagacactgacccagaggagtataagcgcctg
cactctgagagggaagcacatctcaaacgcatccagcagcttgttgaggagactagccgg
ctcaaagctgatgcttccaggagcagtggcactttgactatgctgcagtctcaggttcag
aacttaagggagaacctggggaaggtgatggtggagagggataacctgaagaaagaccaa
gaagccaaaaacttggacatccaggagaaaatgaaaaccatcacacaagttaaaaagatt
ggtcgacgatataaaacccagtatgaggagctcaaggttgaatatgacaagttggtagcc
gctgctgcatctgcaccagcccaggatcaggaggcacagcaggcatcagcacaagaactt
cagggcctcaaagagtccctcaaccaatcagagaataggacaagagaactggaaggccat
ctggagaatctcaatagaactgtaggcgagcgggaagcagaggcacgcggtgcacaggaa
caggcctctcgccttcagggggagctaacacgtctcagacaggagcttcaagagaaatca
tctcaggaggagcgactcaaacagcaactgactgaaaaagaagagaggaccaagaaggcc
atcgtaatggccaagcagaagattagtcagcttactggtgtaaagggtcagcttctgaaa
gaaaatgaggagttgaagcaacaaaaagaggaattggaagtacgagtgagtgcactaaag
tctcagtacgaggggcgtctgagcagacaagaaagggagctgcgagacctccgtgagcag
caggagagacatggagaacagagagacgaaccagcggaacagggctccagcaagacccag
gaacctcaaaggacaacagaacagcgacagatctctctcaagtccactccagtggcagaa
agaggaagtgcaagcacttcagagcctccaactgctaacataaagcccacaccactggca
gcgacccccagcaagcctccagccatcccaggaaacaaatccaccccaagggccagcatc
aaacccatgatcactcctgccccagtgcccactcctacacccactgccacagtcatgccc
acaacgcaggtggagagccaagagcccatgcagtcatctgagggcccgcttgagcatgtg
actgtctatgggagtgccagtggttcagtgcgctccaccagccctaatgttcagaccacc
ctggctcaacctctgctgaacgttcaacagcagagccaagccactgcattcatccagccc
actcaacaacaaacacaaccccctgctgaaccatccaatcaggaacctccagctgctgta
atgctcccaacctcacaaatagacaggcctctttccacatccacagggctgtggagtgcc
accgctagcacaagcagtgccaatgcagtgactgcatctcctagtaatgccttgagcaaa
cgcccccgtgaagaggaacaagagagcatgtctgctgacacgcagtcccaggatgagccc
agtgacactcctatttgcaagagggtccgcattcatagggtggggctggaggaagagata
ttggctgaggacagcactgaggctgagagcgttgtaccgggtgacaaccaggaggctcct
gatgctggacaggagttggagagctacgctactttggagatgatggatgaggaaccagga
ccatctcagtctgtgcctggagatcgacttctgccccattcctctgacacccatcaaagc
ccaaatgagcccgatcaccacgttatagtcattgttagtgacacagatagtgagggagat
catgaagatgaatccgaggaggaggaagaggaggaggaagaagagcaggattatgaggag
gaagatgaggaagaggaggaggaagatgacgatgatgaggaggatggagggattggggaa
gagggagaggagagcaacgaagggagcggcagcagagacggcaatgaggcctacgagggt
gacgacacagaggtccctgatcccacagatccaggcactgagacagaggaaagtcttgga
gcgacagactccacccaacgcatggcagattctcagagctttgaaacgagcacattggat
gtgtttgatgcacccgtcaccagctctgcctctcgacctccacaatcacccaggagacct
cagcatcctctgccaccacgactaaacatcttggccccatctgctcaggacttgggacct
cctgctcaagtccagcgtctcccagttcgtcgacagtcagtgggacgaggccttcagctt
acccctggaatggccagtagtgcacagcagcagcatttctttgaggacgatgacaggatg
gttcccagtacccctacactcattcctccacgctcggatggatttgctgaagcaatccat
tctccacaggtcgcaggcgtatcacgattccgattcggtccttcagatgaccttccacag
accagctcctctcactcagaccttggccagctgccctcacaaggtttaggcatgtatgat
agttctgttttccttggagctcatgaggaggagtcgggtggccgaagtgtacccacaacc
ccactacagatcgctgctcctgtgacaattttatcagagactgtgccatctgaaacaaat
gagcatgcttctcagtctgtacccatggtgagcacctccacaccaggcctcagcgctcct
gcaggccctagtggggtggaggagagagatgacatgttcatggatggaggagacagtgct
gaagcttcacttgaggctgtgtcacagactgaggcagaggaaccagcccagacatcagat
gaggccagtctgccttccacaagccaagaaccttcatctagttctgcagacacaagcagc
tctcagcctcctaaagctagaacggggtctggcagacaatggactagtggtcgtggttct
aggagttttgtaaagaggggtggagcaggtgtcatgggtgtgaggggccgttttgctagg
tga
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integrated database retrieval system
