Megalobrama amblycephala (Wuchang bream): 125279615
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Entry
125279615 CDS
T08212
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
mamb04260
Cardiac muscle contraction
mamb04261
Adrenergic signaling in cardiomyocytes
mamb04270
Vascular smooth muscle contraction
mamb04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125279615 (cacna1fb)
04020 Calcium signaling pathway
125279615 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125279615 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
125279615 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
125279615 (cacna1fb)
04270 Vascular smooth muscle contraction
125279615 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125279615 (cacna1fb)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125279615 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125279615
NCBI-ProteinID:
XP_048065446
LinkDB
All DBs
Position
LG12:19878155..19934216
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AA seq
2069 aa
AA seq
DB search
MYEENRKRNGYSNEEEEGGGEAEEEEEEEGGGGEEGDEGDEEEKDEWEENERPKMNRTET
LNSTCSSTGTQKKKSQHMKKQVQGSNQVQRAPRALFCLKLNNPIRRAALHLVEWKPFDIF
ILLAIFANCVALGVSKPFPEDDSNATNHDLEQVEYVFLIIFTIETFLKILAYGLVMHPSS
YIRNGWNLLDFVIVIVGLFSVVLETVTHKSGETTSHMPSKPGGLDVKALRAFRVLRPLRL
VSGVPSLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFLGRMHRTCYFIGTDNYA
DDDPLPCAFAGHGRQCVINGSECRGKWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVL
YWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQ
MEEDLSGYMDWITQAEDIDEFDEDGNRRVTLRDLADKKRGKFGWFSHSNETHASLPASET
GSENTENIDEEHTDCCAACCARIMKIPCCRALRRWNRCIRRNCRTAVKSVTFYWLVLILV
FLNTALSASEHYNQPDWLTDVQDIANKVLLSLFTVEMLLKMYSLGLQGYFVAFFNRFDCF
VVCGGILETVLVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASL
LLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQILTGEDWNVVMYD
GIMAYGGPVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGGDGDNKKNEEKKEVEG
EQAEGEGENGEVKVDVDDEYEEEEEEPEEGDDEEGKTQLNVADFAPPKEKILPIPEGSAF
FCLSKTNPIRVGCHTLIHHHIFTNLILLFIILSSISLAAEDPIRAHSFRNNLLGYADYAF
TSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVTVSLVSFFLHSSAISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTD
EAKNTPEQCKGTFVVYKDGDVSHPMVRERLWLNSDFNFDNVLMGMMALFTVSTFEGWPAL
LYKAIDANAENHGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGEAEFKNC
ELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYIMFVLILLNTVTLAVQH
YEQSKLFSHVMDILNMVFTGLFTVEMIIKLMALRLRHYFIDAWNSFDALIVVGSVVDIVV
TEFSSSEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIF
FIYAVIGMQTFGKIAMQDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRC
DPESDYEPGEEFTCGSNIAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSD
GTVTFNATLFALVRTALKIKTEGNPDQENEELRIIIKKIWKRTKPKILDEVIPPPADEEV
TVGKFYATFLIQDYFRKFRKRKEKVGLGDSENGNPSALQAGLRTLQDLGPEMRLALNEDL
EEEEDGLEEEQEEDDAHYKNENGYAGHTEPSSRSRRSSLATTPGVAPVPVSGDGILNGGL
GRRSSVAKTQNGNGALEHENFRRRDSTRSSLHYQHKNGVIDQLPKRPSYYKYPRRDSRDR
FSSPLSRREEGGEYPGEQRFYGKDEDSESVISRERHGYPEDSTMFTGHRDMYDGHSVRHP
IYGNHYGNSYEEGRRTARRRLLPATPTGRKTSFNIQCLRRQGSSDDLPIPGTYHQNSPPC
RVRSQGYGSYDSRRSSARSSTGSTASWANTGPRRGRLLYAPLILVEEEGATGAGSVGIWD
KKASSVGVPASVRHPNSGWYSGPSAGGGGQPYRAYTTLRVPTQLSPHYSEKRGSADSLVE
AVLISEGLGLYAKDPKFVAFAKREIADACHMTIDEMESAASDLLSRGGSGESQGFLNHAD
MGPTYSDEEPIRSHEEEELADEMTCVTSF
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggagaaccgaaaaaggaatgggtactccaacgaggaagaggagggtggtggc
gaagcggaagaggaggaggaggaggaggggggtggaggagaagagggtgatgagggtgac
gaggaagagaaggacgagtgggaggagaacgaacggccgaagatgaatcgtacggaaacg
cttaactccacctgcagctccactggaacgcaaaagaagaagagtcagcatatgaagaag
caggtccagggctccaaccaggtccaacgcgcccccagagctcttttctgccttaaactg
aacaaccccatccgcagggctgccctccaccttgtggagtggaaaccatttgatatcttt
attctccttgctatcttcgctaactgtgttgctttgggggtctccaagccttttcctgaa
gatgactcgaatgccacaaaccatgacctagaacaagttgaatatgtgtttctgataatc
ttcaccatcgagacgtttctgaagatcctggcatatggcctcgtcatgcacccgagctcc
tacatccgcaatggctggaatttactggactttgtcatcgtcatcgtagggttgttcagt
gtggtgttagagactgttactcataagtctggtgaaacaacttcccacatgccgagtaaa
cctggaggtctggatgtcaaagccctccgagccttcagagtcctacgacccctcagactg
gtttcaggagtgcccagcctgcagattgtgttaaactccatcatgaaggcaatggttccc
ctgttgcacatctctctgcttgtcctctttgtcatcatcatttacgccatcatcggactg
gagctcttcctcggacgaatgcatcgcacctgctattttataggcacagataattatgcg
gacgatgatccgctcccatgtgcatttgcgggtcacggacgccagtgcgttatcaatggc
tctgagtgcagaggaaagtgggatggacctaacggcggcatcactaactttgataacttc
ttctttgccatgttaacagtttttcagtgtatcacaatggagggctggacagacgtcctg
tactggatgaatgatgcaattgggtttgagctgccatgggtttactttgtcagcctggtc
atctttggatccttctttgttctaaaccttgtgttgggtgtgttgagtggagaattctct
aaggagagagagaaggcgaaagctcgcggagattttcagaagctccgtgagaagcagcag
atggaggaggatctgtctggatatatggactggatcactcaggctgaggacatagatgag
tttgacgaagacgggaacagacgtgtgaccttgcgtgacctagctgataagaagaggggg
aaattcggctggttcagccactcaaacgaaacccatgcaagtcttccagccagtgaaaca
ggttccgagaacactgaaaacatagatgaggaacacacagattgttgtgctgcttgctgt
gctcgcattatgaagatcccttgctgtcgtgcccttcgccgctggaaccgttgtattcgg
agaaactgtcgtacagcagtgaaatctgtgacattctattggttggtgctgatcctggtc
ttcctcaacacagctctcagtgcctcagaacattataaccaaccagactggctcactgac
gttcaggacattgccaataaggttctcctgtcattgttcacagtggagatgttgctgaaa
atgtacagtctggggttgcagggatattttgtggcatttttcaaccgttttgactgtttc
gttgtgtgcggtgggattctggagacagttcttgtggagttggagatcatgccacctctt
ggcatctcagtgttgcgctgcgtccgcctgcttcggatcttcaaagtcacacgccattgg
acggctctgtccaatctggtggcctcgctactgaattcaatgaagtccattgcctccctg
ctgctgttgctcttcctcttcctcatcatcttcgctctgctaggcatgcagctattcgga
gggaagttcaacttcgatgagacacagaccaaaaggagcacctttgatgccttccctcag
gccctgctcacctgctttcagatattaacaggtgaagactggaatgtagttatgtatgat
ggtatcatggcgtacggtggcccggttttccctggaatgatcgtctgtctttactttgtg
attttgttcatctgtggtaactatatcttgctgaatgtcttcttggccatcgctgtcgac
aacttagcaggaggcgatggagacaataagaagaatgaagaaaaaaaagaggttgaggga
gaacaggctgaaggtgaaggagagaatggagaggtgaaggtggacgtggatgatgaatac
gaggaggaagaggaggagccagaggagggagatgatgaagaagggaaaactcagctcaat
gttgctgactttgctcctcctaaagagaaaattctaccaatcccagagggcagtgcgttc
ttctgcctcagcaagaccaacccgataagagtgggctgccataccttgatccatcaccac
atcttcactaatctcatcctgcttttcatcattctcagtagcatttctctggctgcggag
gatcctatcagagctcactccttcaggaacaatcttctgggttatgctgattatgcattt
acttccatattcactgtggagatcttactgaagatgacagtacatggtgcattcctccat
cagggttccttctgtagaaactggtttaatctgttggatcttttggtggtcactgtgtct
ctggtctccttcttcttacattcgagtgccatctctgtagtgaagatcctaagggtgctc
agagtactgaggcctcttcgagcgatcaacagagccaaaggactcaagcatgtggtacaa
tgtgtgtttgtggctataaggaccatcgggaacatcatgatcgtcaccactctacttcag
ttcatgtttgcctgcattggtgttcagcttttcaagggtaaattttatcgttgcacagat
gaagccaaaaacactccagaacagtgcaagggaacatttgtggtgtataaagacggagat
gtgagtcatccaatggtgagagagaggctctggctcaacagcgacttcaactttgataat
gtactgatgggaatgatggccctgttcacagtctccactttcgagggctggccagcgctg
ctctacaaagccattgatgccaatgcagagaatcatggacccatttacaactaccgtgtg
gagatctctatattcttcatcatctacatcatcatcatcgccttcttcatgatgaacatc
ttcgtgggttttgtcatcatcactttccgtgagcagggagaggccgaattcaagaactgc
gagctggataaaaatcagagacagtgtgtggaatacgccctaaaggcccagccgttgaag
ttgtacatccccaaaaacccagtgcagtacaagttctggtctataatcaactccacaggg
tttgagtacatcatgtttgtgctgattctcctcaacactgttactctggctgtgcagcac
tatgaacagtcaaagctctttagtcacgtgatggacatccttaatatggttttcactggc
cttttcactgtggagatgatcattaaactgatggctctcagactcaggcattactttatt
gacgcatggaattcctttgatgctctgattgttgtgggaagtgtggtggacattgtggtt
acagagttcagtagctcagaggacagttctcgtgtatccattactttcttccgcctgttt
cgtgtaatgcgattggttaagctactcagcaagggagagggcattcgtaccctgctttgg
acttttgtgaaatcactccaggctctgccgtatgttgctcttctgattgctatgatcttc
ttcatctatgctgtgattggaatgcagacatttggaaagattgccatgcaggaccacacg
caaatcaacaggaataacaattttcagacctttccgcaggctgtgctgcttctattcagg
tgtgcaacgggtgaagcgtggcaggagatcatgttggccagtcttccagggaagcgctgt
gaccctgagtcagactatgagcccggtgaagaattcacctgtggcagcaacattgccatt
gtctacttcatcagtttctttatgctctgcgccttcttgattattaatctttttgttgct
gtcattatggacaatttcgactatttgacccgtgattggtcaattcttggaccacatcac
ctggatgagttcaaaagaatctggtcagagtatgaccctgaagccaagggtcgtattaag
cacttggatgtagtggctttgctcaggaggatccagccgccacttggatttgggaaactc
tgtcctcatcgtgtggcctgcaagaggctggttgccatgaacatgcccctgaacagtgat
ggtacagtgaccttcaacgccacactgttcgccctggtcagaactgccctgaaaatcaaa
actgaggggaaccctgatcaagagaatgaagagttgagaatcatcattaagaagatctgg
aagagaacaaaacccaaaatcctggatgaggttattccaccccctgctgatgaggaagtg
actgtgggtaaattttatgctacgttcctgatccaagactatttcaggaagttccgtaaa
aggaaggagaaagtaggtctgggagattcagagaatggtaacccttcagctctacaggca
gggctgcgaactctgcaggacctagggccagaaatgagactggccttgaacgaagatctg
gaggaggaagaggatggtttggaggaggagcaagaggaggatgatgctcattataagaat
gaaaatggctatgcgggccacactgagccttcaagcagaagccggcgctcctctttggcc
actactcccggcgttgctcctgttcctgtctcaggagatggcatcttgaatgggggactg
ggacgtaggagctctgttgcaaaaacacagaatgggaacggtgctctggagcatgagaac
ttcaggagaagggacagcacgcgttcctcccttcattaccaacacaagaatggtgtgatt
gaccagctgcccaagaggccatcatactacaaatacccaaggagggactccagagacagg
ttctcttctccgctgtctcggagagaggaaggcggtgagtaccctggagagcagcgcttc
tatggaaaagacgaggacagcgagagtgtcatctctagagaaaggcatggttatccagag
gacagcacaatgttcactggacatagagacatgtatgatggccactctgtgagacacccg
atctacggtaatcattatggaaacagttatgaagaaggcaggaggacagcacgaagacgc
ctgctgccagcaacacctactgggagaaagacttcatttaatatacagtgtttaagaagg
caaggtagcagcgatgatctgcccatcccaggaacgtatcatcagaactctccaccctgc
agagtgcgttcacagggatacggcagttacgattctcgtcgcagcagcgcaagatcgtcc
acaggttcaacggcatcctgggcgaacaccggccctcgacggggtcgtctcctctacgct
ccccttatcttggtagaggaggagggagcaacaggggctggtagtgtgggcatctgggac
aaaaaggctagttccgttggagtgcctgcgtcggttcggcatcccaattcgggatggtac
tctggaccctctgctggtggagggggacagccgtatagagcctacaccacccttagagtc
cctacccaactcagtcctcactacagcgagaagagaggcagcgctgacagtctggtggaa
gcggtcttgatttctgaaggtttggggttatacgccaaggacccaaaatttgtagccttt
gccaagcgtgagattgcagatgcctgtcacatgaccatagatgagatggaaagtgctgca
agtgatcttttaagccgtgggggctctggggaaagccaaggctttctgaaccacgcagac
atgggacccacatacagtgacgaggagccaatcaggagccacgaggaagaggagctagct
gatgagatgacttgtgttacgtctttctga
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integrated database retrieval system