KEGG   Mesorhizobium amorphae: A6B35_04445Help
Entry
A6B35_04445       CDS       T04446                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mamo  Mesorhizobium amorphae
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mamo00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    A6B35_04445
Enzymes [BR:mamo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A6B35_04445
DNA repair and recombination proteins [BR:mamo03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A6B35_04445
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(929522..932047)
Genome map
AA seq 841 aa AA seqDB search
MAGLEQYQAKRDFRKTTEPAGKVSRAGKTAGGIFVIHKHAATRLHYDLRLEHDGVLWSWA
VTRGPSLDPHEKRLAVHVEDHPIDYAPFEGTIPKGEYGGGSVIVWDEGKWVPEMDPAKAM
KKGHIGFELKGHKLHGRWHLVRLKPRSGEKRDNWLLIKSDDAAARPGEDILKDAPKSVKS
GLTVEEVGAGKTAKGKKAEVWHSNRPAAGKPKAGHAKRLGFIEPSLATLQKNAPSGEEWL
HEVKFDGYRMQAQLAGSEVRLLTRAGLDWTGKFDGPVTAALASLKCRDAIVDGEVVVLAD
SGVSSFALLQADLSARRTDRFVYYVFDLMRLNGQDLRREPLVERKQALAELLGEQSEQSA
LRFSDHFAEPGKVMLQHVCRMGLEGVVSKRADAPYRSGRGLTWVKSKCTLRQEFVIGGYL
PSDKTGRGLRSLLVGYHEGGKLHYAGRVGTGFSGKVAADLKKRLDGLKAKTSPFSAAVPK
GKGLVWVEPELVGEVEFRSWTSDRMIRHASFQGLREDKPPEEVVQEKPKQATGKAGSNSK
ADGTKAAPRATSAGAVKTSVKLSHPDKLLWPDEKVSKQGLLDHYALVWPRMEQFVVSRPL
SLVRAPDGIGGPRFFQKHASAGMHDKILRMKDPMDGEEILFIRDFDGLAALVQYGVVEVH
IWGCTVEELEKPDQIIFDLDPDEGVGVKAVREAALDIHVRLDELSLPNLVKTSGGKGYHV
VVPLKPSADWDEAKTFAHDFARALEQAAPDRYTATLSKKARTGKIFVDYLRNGRGSTTVT
PYSSRAKKGATVSMPVTWAEIEAGLAPNAFAVGDKATLKRLAEADPWKDFFKLGKPLKRA
L
NT seq 2526 nt NT seq  +upstreamnt  +downstreamnt
atggccggcctcgaacagtaccaagccaagcgcgacttccggaaaaccaccgagccggcg
ggcaaggtctcgcgggccgggaaaacggccggcggtatcttcgtcatccacaagcatgcg
gcgacaaggctgcactacgatctgcgcctcgagcatgacggcgtgttgtggagctgggcg
gtgacgcgcggcccgagcctcgatccgcatgagaaacggctggccgtgcatgtcgaggac
catccgatcgactatgcgccgttcgaaggcaccattcccaagggcgagtatggcggcggt
tccgtcatcgtctgggacgagggcaaatgggtgcccgagatggatccggccaaggcgatg
aagaagggccatatcggcttcgagctgaagggccacaaattgcatggccgctggcatctc
gtcaggctgaagcctcgctccggcgaaaagcgcgacaactggctgctgatcaagtccgac
gatgccgccgcgcgccccggcgaggacattctgaaagacgcgccgaaatcggtgaagtcg
ggcctgacggtcgaggaggtgggcgcgggcaagacggcgaaaggaaagaaggccgaggtc
tggcattccaacaggccggctgctggcaagcctaaagccggtcacgccaagcgcctcggc
ttcattgaaccaagcctcgccactctgcagaagaacgcgccttccggtgaggagtggttg
catgaagtgaagttcgacggctatcgcatgcaggcccaacttgccggcagcgaggtcagg
ctgctgacccgcgccggtctcgactggaccgggaaattcgacggcccggtcaccgccgcg
cttgccagcctgaagtgccgggatgccatcgtcgatggcgaggtcgtcgtgctcgccgac
agcggcgtctcgtctttcgccctgctgcaggcggacctgtcggcccgccggacggatcgc
ttcgtctactatgtcttcgacctgatgcggctcaacggccaggatctgcgccgcgagccg
ctggtcgaacgcaagcaggccctggcggaactgctcggcgagcagtccgagcaatcggcg
ctgcgcttcagtgaccatttcgccgaaccgggcaaggtcatgctgcagcatgtctgccgg
atgggcctggaaggcgtcgtttccaaacgcgccgatgcgccttaccgcagcggccgcggt
ctgacctgggtgaagtcgaaatgcacgctgcgccaggaattcgtcatcggcggctatctg
ccatccgacaagaccggacgtggcctgcgctcgctgctggttggttatcatgaaggcggc
aagctgcactacgccggccgcgtcggcaccggtttctccggcaaggtggccgcggatctg
aagaagcggctcgacggcctcaaggcaaaaacctcgcctttctccgccgccgtgccgaaa
ggcaagggactggtctgggtcgagcccgaactcgtcggcgaagtggagttccgcagttgg
acatccgaccgtatgatccgccacgcctcgttccagggattgcgtgaggacaagccgccg
gaggaagtcgtgcaggaaaagccgaagcaagccaccggcaaggccgggagcaactcgaaa
gcggatggcaccaaggcggccccgagggccacttcggccggagccgtgaagacctcggtg
aagctttcgcaccccgacaagctgctgtggcccgacgagaaggtttccaagcaaggtctg
ctcgatcactacgcgctggtctggccgcgcatggaacaattcgtcgtcagccggccgctc
agcctggtgcgggcgccggacggcatcggggggccacgcttcttccagaagcacgcttcc
gccggcatgcacgacaagatcttgaggatgaaggatccgatggacggcgaggagatcttg
ttcatccgggatttcgacggcctcgccgcgctggtccagtacggcgttgtcgaggtccac
atctggggctgcaccgtcgaggaactggagaagccggaccagatcatcttcgatctcgat
ccggatgaaggtgtcggcgtcaaggccgtgcgtgaggccgcactcgacatccacgtccgg
ctcgacgaactgtccttgccgaacctcgtcaagacgtccggcggcaagggctaccatgtc
gtcgtaccgctgaaaccctcggcggattgggacgaggcgaagaccttcgcccatgatttc
gcccgcgcgctggaacaggccgcacccgaccgctacacggcgacgctgtcgaagaaggcg
cgcaccggaaaaatcttcgtcgactatctgcgcaatggccgcggctcgacgacggtcacg
ccctattcgtcgcgggccaagaagggcgcgacggtgtcgatgccggtgacctgggcggag
atcgaggccgggctggcgccgaacgcttttgcggtcggcgacaaggcgacgctgaagcga
ctggcggaagccgacccatggaaggatttcttcaagcttggtaagccactcaagcgggca
ctatga

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