Misgurnus anguillicaudatus (oriental weatherfish): 129450127
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Entry
129450127 CDS
T09481
Name
(RefSeq) synaptopodin-2-like isoform X1
KO
K24066
synaptopodin-2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129450127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
manu04990
]
129450127
Domain-containing proteins not elsewhere classified [BR:
manu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129450127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
Motif
Other DBs
NCBI-GeneID:
129450127
NCBI-ProteinID:
XP_055068591
LinkDB
All DBs
Position
1:52306179..52330941
Genome browser
AA seq
1555 aa
AA seq
DB search
MFRSLEDSCRRMGTGDYVCVILRGGAPWGFRLRQSTQEPQHLLQVFEVEDDSCAAVAGLC
ENDELLSVNGKLCSNLSLSEAIDLIEASADCLQLLVKRCCTQPPKSLKSHSTTLRIPSPS
RPRVPHDDLYISESQDEAYYGETDSDAECPGGIGLVRTQVQIPPSRSKAKNSYAQRGEDT
RIEVTPGSVVELQLTLSQTTLEEPQYTSLGSACGVVGDIHPIKTSETTTTFATGCPLYVR
RQDRQPLGQRGVLVNKPTALQRQVEVTVQHLRDSRSEEEGAETSERLDSAGEGGHIEEVP
TSSSVSFGLPSEEWDSESEREVNKPNKHRARHARLRRSESLSEKQVKEAKSKCKRIALLL
TAPAPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPDYEDGSEEDEEAHAVEITVLATG
ETEVDEDFFTNASGQKSIVTFDWKTGLLEIERKLDNKQNMEALPETKGKGALMFAQRKQR
MDEIVAEHEELRRKGIPVEGQPEPETHQTYQHVEQHTYMQPQENQNYMDVNLHHGISTQK
QQQEQYHQYQEQYYQQQQQQQQQYQEYQQQLQYQQQYQQQQQYQQDCQQQKLYEQSYNQQ
QHLQQQQYSHHMNGMFEQQMNEMQVSVTNRSAKPFSVQNRAAAPFSPSTSADYQEQSGYS
LGQGEQIASRDERISVPAIKTGILQDTRRRNANKPMFTFKESPKVSPNPELLNLLNKSNK
KTGLETEEDYLSLGAEACNFLQSPKVKQKTPPPVAPKPHIDPASPPWSAPPETTDQPIPQ
QTENGVSAPALAPTMGAHVTSVPAPEMQAPTVSAEPRIAPESQDVSHCTEQLASGNTWKR
PESPTEPTKQPETWNKAQLQQQNYSAQLVAPPPMQSDPSVKSWDPALIQGHQQPPVSTWG
PNEVQLQRQSQNQSEEHSQWIAQSQSQSEVQLQATTVTQSQPSWVTQTQSPIQTEHQAPP
QTQPQINSWASGPNQSTPQPTWSQQHVSAQPSSSVWQQNPGQEQPQPLWAQQQQFQESQQ
TVESSWASPPQQQPTWTQSQIQPQPQPSWVSQAKPQMPTQPPETAWTQPQSSVQAQPTWS
QQNQPPPQPTALMQHPTHSWEPVPAQSQPQWAQKPASPQHPQQIIQSWTPEQNQIQAPWG
KPQPPVPPQVQAPWPQKPQQQASQPSVTQWTPPSQSQPPVNTWSTQHQQRSTSMAQTETQ
KLPSQPTKPWSPPQNTQPPPLRRMHSGTPPSSALSPSGYGSAFEMPALRGKGAELFAKRQ
SRMEKYIVDSTTVQSNKARPSSPSPSLPSSWKYSTNCRAPPPLAYNPIHSPSYPPGAVKQ
TPSSSTNKNKSKQGQKPAKKPLPVLDVMKHQPYQLKSSLFIYGPAAEKLAAEKEAAEKLT
DHKADEVQAQAQALGPPNQSQQIAYSPPPYGFMPQQAQQPYGMAGQSSPMSNVPYHQVPP
NTYQPVPSNYQQQQEYNPQQVYQQPLNPYHQAPSPPYRQPSPPSYQAGPNPAYQAGPALS
YQPAPSSHIAAAFPVAARADSASGGSVASAPKPKFLAKKSAAQVWKPSTAENAEN
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcagtctggaggatagctgcaggaggatgggaactggggattatgtgtgcgta
atactgcgcggtggcgcgccatggggattcagactgcgccagagcacgcaagaaccgcaa
catcttcttcaggtgtttgaggtagaggatgacagctgtgctgccgtggctggattgtgt
gagaatgatgagctattgtcagtgaatgggaaactttgctctaacctcagtctctcagag
gctattgatctcattgaggcgtcagctgactgtctacagctgcttgtcaaaagatgctgt
acccaacctccaaagtctcttaaatcacatagtaccactttacggatcccatctccatcc
agacctcgtgtcccacacgatgatctctacatctctgaatcccaggatgaagcatattat
ggggaaacagacagtgatgcagagtgtcccggagggattggattggtccggacccaagtt
caaatccccccttctaggagtaaagctaaaaacagttatgcccagcgcggtgaagacacc
aggatagaggtaaccccaggatctgtggtcgaattgcaactcaccctctcccagaccacc
ctagaagagccacaatatacttcactgggcagtgcttgtggagttgtgggagacatacat
cctataaagacaagcgagaccaccactacatttgctacaggttgccccctctacgtacgc
agacaagaccggcaacctcttggtcagcggggcgtgttggttaataaacccactgctttg
cagagacaggttgaggtgactgtacagcacttacgtgacagcagatcagaagaggagggg
gcagaaacaagtgaacggttggattctgccggagagggagggcacattgaagaagttccc
acctcctcctctgtgtcttttggacttccttcagaggagtgggactctgaatcggagagg
gaggtcaacaagccaaacaagcacagggcaaggcacgccaggctccggcgtagtgaaagc
ctttcagagaagcaggtgaaggaggccaagtctaaatgtaagcgtattgctctactacta
accgctcctgcccccaaccccaataacaagggggtgttgatgttcaagaagcatagacaa
agggccaagaagtatacacttgtaagctacggtaccggtgaggacgaaccagattacgag
gacggcagtgaagaagacgaggaggcgcacgctgttgagatcacagttctagccactggt
gaaacagaagttgatgaggatttttttaccaatgcctcaggccagaaaagcattgtaact
tttgactggaagactggattacttgagatagagcgcaaacttgacaacaagcaaaatatg
gaagcactacctgagaccaagggtaaaggagccctcatgtttgctcaacgcaaacaacgc
atggatgagatagtagctgagcatgaagaattgagacgtaaggggatccctgttgagggg
cagccggagcctgagacccatcaaacgtaccaacatgtggagcagcacacttatatgcag
ccacaagagaaccaaaattatatggatgtgaatcttcaccatggcatttcaactcaaaag
cagcagcaggagcagtatcaccaataccaggaacagtattatcaacagcagcagcagcag
cagcagcagtatcaagagtatcagcagcagctacaataccaacaacagtatcaacaacag
caacaatatcaacaagactgtcagcaacaaaaactgtatgaacaatcatacaatcagcaa
caacacctccagcagcaacagtattcacatcatatgaatggcatgtttgagcagcaaatg
aacgaaatgcaggtatcagttacaaacaggagtgccaagccattttcagttcaaaacaga
gcggccgctccattttccccctccacaagtgcagattatcaagaacagtctgggtattca
ctgggacaaggggaacagattgcatcccgtgatgagcgtatatctgtgcctgcgatcaag
actggaatcttacaagatacaaggaggaggaatgccaataaacctatgttcacttttaaa
gagtctcccaaggtttcccctaatcctgagctgttgaatctccttaacaagagtaacaaa
aagacaggtttggaaacagaggaagattatttaagtttaggagctgaagcctgcaacttt
ctgcagtctcctaaggtaaaacaaaaaactccaccaccggttgcccctaaacctcacata
gacccagcttctcccccttggtctgctccacctgaaactaccgatcaaccgattccacag
caaactgaaaatggtgtctcagcacctgcactagctccaaccatgggagctcatgttact
tctgtccctgcccctgaaatgcaggctccaacagtgtctgcggaaccaaggatagctcct
gagtcccaggatgtttcacactgtacagaacaactagcttcaggtaatacgtggaagcga
ccagaatctccaacagaaccaaccaagcaaccagagacttggaataaggcacaactccag
cagcaaaattattctgctcaacttgtcgcaccacctcccatgcagtcagatccatctgtg
aagtcatgggatccagctctaatccaaggtcatcagcagcctccagtaagtacctggggt
ccaaatgaggtccagctgcaacgtcaatctcaaaaccagtctgaagaacactcacaatgg
atagcacagtctcaaagtcaatcagaagttcaactgcaagcaactactgtaactcagtct
cagccttcttgggtaacacagactcagagtccaatccaaaccgaacatcaggcaccacct
caaacacagcctcaaattaattcttgggcttcgggtccaaatcagtcaacaccccaaccc
acatggtctcagcagcatgtatcggcacaaccttcttctagtgtttggcagcaaaatcca
ggtcaggagcagccacagccactttgggcccaacaacagcaattccaagagtctcaacaa
actgtagaatcttcttgggcatcacctccccagcaacaacctacttggacccaaagtcaa
attcaacctcagccccaaccatcctgggtctcccaagccaaaccacaaatgccaacacag
ccacctgaaactgcatggacccaaccacaaagttctgttcaagcacagcctacatggtct
caacagaatcaaccaccacctcaacccacagcattaatgcagcatcccacccattcttgg
gaaccagtgccagcccagtcccagccacaatgggcacaaaaacctgcttctccacaacat
cctcaacaaataattcagtcttggacacctgagcagaatcaaattcaggcaccctggggt
aagccacagccaccagttccacctcaagtgcaggctccatggccacagaaacctcagcaa
caagcatcacagccatctgttacccagtggaccccaccatctcagtctcaacctcctgta
aatacttggtcaacccaacatcaacaacgttccacaagcatggctcaaactgaaacccaa
aagttgccttcccaaccaaccaagccatggagtccacctcagaacacccagccccctcct
ctacgccgaatgcacagtgggactccaccaagtagtgctctgtcaccctctggttatggt
tcggctttcgagatgccagccttgcgaggcaaaggagctgaacttttcgccaagcggcaa
tctagaatggagaagtacattgtggattctaccacagtacagtcaaataaggcaagacca
tcttcaccttctccttctttgccaagctcatggaaatattcaactaattgcagggccccc
cctcctttggcatataatccaattcattcaccatcatatccgccaggtgctgtcaagcag
actccttcctccagcacaaacaagaacaaaagcaaacagggtcaaaaacctgccaaaaaa
ccacttcctgtgcttgatgtcatgaagcatcagccctatcagttgaagtcctcccttttt
atctatggtccagcagcagagaaacttgctgcagaaaaggaggcagctgaaaagcttact
gatcacaaagcagatgaagtccaggcccaggcccaagcattaggtcctccaaatcagagc
cagcaaattgcatatagtcctccaccttatggttttatgccacaacaggcccagcaacct
tatgggatggctggtcagtcatcccctatgtccaatgtgccttaccaccaagtgcctcct
aatacatatcagcctgtccctagtaattatcaacaacaacaagaatacaacccccaacaa
gtataccaacaacctttaaatccttaccatcaagctccaagtcctccctaccgacagccc
tctccaccttcctatcaggcaggtcctaatccagcatatcaagctggcccggcactgtct
taccaaccagcccctagctcacatattgccgcagctttcccggtagcagcaagagccgac
tctgcctcaggaggcagtgttgcttctgctccaaagcccaaatttttagctaaaaagagt
gctgcccaagtgtggaagccaagcactgctgaaaatgctgaaaattag
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integrated database retrieval system
