Myxocyprinus asiaticus (Chinese sucker): 127454037
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Entry
127454037 CDS
T08782
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127454037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
masi03036
]
127454037
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127454037
Chromatin remodeling factors
NuRD complex
127454037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
zf-HC5HC2H_2
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
127454037
NCBI-ProteinID:
XP_051576923
LinkDB
All DBs
Position
16:18738335..18773440
Genome browser
AA seq
1963 aa
AA seq
DB search
MSGSEDDKDHFGPMRDDEDADEPISEIEAPKSKKKKKAKKSRESRSSKRQKALREEVPVS
SPEVMEAIRMVGEEEEEEDRVMRSESEGSDYAPSKKKKKRSSSSKERKKGSTGEKAGSSS
GGKSKRKDPEPEEDDDDDDDDDGQEPKSSSQLLADWGMKDIDYTFTQEDYTSLTNYKAFS
QFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPMRGLASANAALAAANVAAAVESMVT
RVDGGGATPVATPTPTAAPAALAPPPQQPPAVPLRKAKTKEGKGPNARRRSKPTPKPQDK
KSKAKKVAPLKIKLGNFKRKRSSSGEDDDGESDFDSFSVSDGSNSRGSRSKSKKSKSSKK
KKRVDEEADGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHC
EKEGIQWEAREESSEAEEEIDDGRRDEGDVEEEDDHHMEFCRVCKDGGELLCCDTCPSSY
HLHCLNPPLPDIPNGEWICPRCLSLPLKGKVQKVLTWRWGEAPPPMPVPRPVDLPADAPD
PPPMIGRKEREFFVKWCNMSYWHCSWVQELQLELNCQVMFRNYQRKTDMEEPPNLELGAE
GDEDKSCKRKNKDPFYARMEDRYGRFGVKLEWLLIHRILNHSVDKKNNVHYLIKWRDLQY
DQSTWECEDMDIPDFETFKQHYWNHRELMLGEEGRPGKKLKKVKVKKTERPPANPVVDPT
IKFDRQPDYLDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLY
KEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFEDNAIR
GGKKASKMKKEASVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVL
NNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFAEIAKEDQIKKLHDM
LGPHMLRRLKADVFKHMPSKTELIVRVELSSMQKKYYKYILTRNFEALNTRGGGNQVSLL
NVVMDLKKCCNHPYLFPTAANEAPKMPNGMYDGSALTKSSGKLMLLCKMLRKLKEGGHRV
LIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAG
GLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKASVEERITQVAK
KKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKGEIGEGDSKEEDSSVIHYDDK
AIDRLLDRNQDATDDTELQSMNEYLSSFKMAQYVVKDEEEEEEDVDREIIKQEESVDPDY
WEKLLRHHYEQQQEDLARHLGKGKRPRKPVNYNDCSQEDRGSRRDWQDDQSDNQSDYSVA
SEEGDEDFDERSEANSRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAV
MRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLS
RQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMKELEESKRAAAIAAGEDPKTPSSGTPA
DTQPNTPATEDLSKSEDTGKELEEKTEGDGENETKGSRQEDEIIEIPDEGEKSSSPKEQK
KEKEREDTSLSGEKDGGSRELDKEKEKDGEKEEMLPESKENTTSSDVKAKSSETSSSADT
SKTKEESSEEKTEKMDTSPAGEEKKDLKEKDSTKTEDSAKLQNGENGKDTSGGGDGVSEE
KKKAVKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIIHHGYA
RWQDVQNDPRFAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNM
TEDPSHPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMKAD
VTRLPATIARIPPVAVRLQMSERSILSRLASRGPEVTQTQAPR
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagtgaagacgacaaggaccattttggacccatgagagatgatgaagatgca
gacgaaccgatatcagagatagaggctcctaaatccaaaaagaagaagaaggcaaagaaa
agccgtgaaagtaggagcagcaaacgacagaaagccctcagagaggaagttcctgtcagc
tctcctgaagtgatggaagcgatcagaatggttggagaggaagaagaggaggaggacaga
gtgatgcgatctgagagtgaaggaagtgattatgcccctagcaagaagaagaaaaagaga
tcaagctcttctaaggagagaaagaagggttcaacaggagagaaggctggcagctcatct
ggaggaaaaagcaaacgtaaagatccagagcctgaggaggatgatgatgatgatgatgac
gatgatgggcaggaacccaagtcctcctctcagctattagcagactggggaatgaaagac
attgactacacctttacccaggaggactacacctctctcaccaattacaaagctttcagc
cagtttgtcaggcctcttatagctgctaaaaaccctaagatcgctgtatcaaagatgatg
atggtattgggagctaaatggcgggaattcagcactaataatcccatgcgaggtttggcg
agtgccaacgcagccctggcagctgccaacgtagctgctgcagtggagagtatggtgacc
agggtggatggaggaggggcaacacctgtggccacacccacaccaacagcagctcctgct
gcactggcccctccaccccaacagcccccagcagtcccactacggaaagccaagaccaaa
gagggcaaaggcccaaatgcacgtaggaggtccaagcccaccccgaagccccaggacaaa
aagtctaaagcgaagaaagttgctccactcaagattaagctgggcaacttcaagagaaaa
cgttcctctagtggtgaggatgatgatggtgagagcgattttgatagtttctctgtcagt
gatggttctaacagtcgtggcagccgctccaaaagtaagaaatccaagagctccaagaaa
aagaagagagtggatgaagaggctgacggctatgagactgatcatcaggactactgtgag
gtgtgtcagcagggcggtgagatcattctgtgtgacacctgtccacgagcctatcacatg
gtgtgtctagaccctgacatggagagagcccctgagggcacctggagttgcccacactgc
gagaaggagggaattcaatgggaggctcgggaggagagctctgaggcggaagaggagatt
gatgatggaagaagggatgaaggagatgtagaagaggaggatgatcatcacatggagttt
tgtcgggtgtgtaaagatggaggagagctgctgtgctgtgacacctgcccctcgtcctac
cacttacactgtctcaatcctcccctgccagacatccccaacggagagtggatctgccct
cgctgcctgagtcttccactaaagggcaaagtccagaaagttctgacctggcgatggggt
gaagcccctccccctatgccagtgccacgccctgtggacctcccagccgatgccccagat
ccccctcctatgattggtcgaaaggagagagagttctttgtgaagtggtgcaacatgtct
tactggcactgttcttgggtccaagaactacagttggagctgaactgtcaagtaatgttc
cgtaactaccagcggaagacagacatggaggagccccccaatcttgagctaggtgctgag
ggagatgaggataagagctgtaagagaaagaataaagatcctttctatgcccgcatggag
gatcggtatggacgctttggagtaaagctcgagtggctcctcatccacagaatcttgaac
cacagtgtggataagaaaaataatgttcactatctgatcaaatggagggatttgcagtat
gatcagtcaacttgggagtgtgaagacatggacatcccagactttgagactttcaaacag
cattactggaaccacagggaactgatgcttggagaggagggcagaccaggtaaaaagttg
aagaaggtgaaagtgaagaagacagagaggcctccggctaatcctgtggtggatccaacc
ataaagtttgacaggcagccggattatctggacactacaggtggtacacttcacccatac
cagctggagggactgaactggttgcgtttctcttgggctcaaggcacggacaccattcta
gctgatgagatgggtctgggaaaaactgttcagaccgccgtctttctctactcgctctac
aaagagggtcattcgaaaggtcctttcctggtgagtgcccctctgtccaccatcattaac
tgggagagggagtttgagatgtgggccccagacatgtacgtggtcacttatgtgggtgat
aaagacagcagggctgtcatacgcgagaatgaattctcctttgaggacaatgccatccgc
ggtgggaagaaggcatccaaaatgaagaaagaggcttctgtaaagttccatgtactgtta
acgtcctacgagctgatcacaatcgatcaggccatcctgggttccattgactgggcctgt
cttgtggtagatgaggcccacaggctcaaaaacaaccaatcaaagttctttcgtgtgttg
aataactacccactccagcataagttgctgttgacaggcactcctttacagaacaacctg
gaggagctcttccatctgctcaacttcctcacgcctgagagattcaataatctggaaggc
ttcctggaggagtttgctgaaattgcaaaagaggaccagattaagaaactgcacgacatg
ttgggtccacacatgctccgaagactcaaagccgatgtcttcaaacacatgccctcaaaa
actgaactcattgtgcgagtggagctcagctccatgcaaaagaagtactacaagtacatc
ctgacacgcaactttgaagctttgaacactcgtggtggaggaaaccaggtgtctttgctc
aatgtggttatggatttgaagaagtgctgtaaccacccctacctcttccccacagctgct
aatgaagccccaaagatgcccaatggcatgtatgatggcagtgcccttacaaagtcttct
gggaaactgatgcttctgtgtaagatgctaaggaaactgaaagagggtggacatagagtg
ctgatattctcgcagatgacaaaaatgttggacttgctagaagacttcctggaaaatgaa
ggatacaagtatgaaaggatagatggaggggtgactggagggatgagacaggaagccatc
gatagattcaatgctcctggtgctcctcaatttgttttcctcctgtccaccagagcagga
ggtttgggcatcaatttggcaaccgctgacaccgtcatcatctatgactccgactggaac
ccacacaatgatattcaggcatttagcagggctcatcgtattggtcaaaataggaaggtg
atgatctatcgatttgtcactaaagcatctgtggaggaaagaattacgcaggtggcaaag
aagaagatgatgttgacccacctggtagtgcgacctggtctgggctccaaggctggatcc
atgtctaaacaggaattggatgacatcttaaagttcggtacagaggagctttttaaaggc
gagatcggagaaggtgacagtaaggaggaggacagcagtgtgatccactatgatgacaag
gcgattgatcgtctgttggatcggaaccaggacgcaacagatgacacagagctgcagagt
atgaatgaataccttagctcctttaaaatggcccagtatgtggtcaaagatgaggaagag
gaggaggaggatgtggatagagagatcattaaacaggaagagagtgtagatcctgattat
tgggagaaactcttgcgtcatcattacgagcagcagcaagaagatttggctcgtcatctg
ggcaaaggcaaacgaccacgtaaacctgtcaactacaacgactgttcacaggaggacaga
ggtagtagacgggactggcaggatgatcagtctgataaccaatcagattactctgtggct
tcagaggagggtgatgaggactttgatgaacgttctgaagctaactctcgaaggccgagt
cgcaaaggcttgaggaatgacaaagacaaaccactgccccccctactggccagagtggga
ggaaacattgaggtgttgggtttcaatgctcgtcaaaggaaggccttcctgaatgcagtg
atgcgttatgggatgcctccgcaggatgccttcaccacccagtggctcgttagagacctg
cgaggcaaatcagaaaaagagttcaaggcatacgtgtccctttttatgcgtcacctgtgt
gagccaggcgctgatggggcggaaacatttgctgatggtgttccacgggaagggctgtca
cgacaacatgtcctcacacgcataggtgtgatgtcactgattcgcaagaaggtgcaggag
tttgagcatgtgaatggtcaatggtcaatgccctggatgaaagaactggaggaaagcaag
agagcggcggccatagcagcaggagaagatccaaaaacaccttcttctggaacaccagct
gatacgcagcccaacacaccagcaacagaagacctgtccaagagtgaagacacggggaaa
gagctggaggagaagacggagggagatggagagaatgagacaaaaggctccagacaggag
gatgagattattgagattcctgatgaaggtgagaaatcctccagtccaaaagagcagaaa
aaggaaaaggagagagaggatacatcactgtcaggggagaaagatggagggagtagagag
ttagacaaggagaaagagaaggatggagagaaagaggaaatgttgcctgaatcaaaggag
aacaccacctcttcagatgtcaaggccaaaagttctgagacatcaagcagtgcagacaca
tccaaaaccaaagaagaatcttctgaagaaaagacagagaaaatggacactagcccagct
ggagaagagaagaaagacttgaaagagaaggatagcacaaagactgaggactctgccaag
cttcaaaatggggagaacgggaaagacacaagtggaggaggggatggagtgagtgaggag
aagaagaaggcagtaaagcagaggttcatgtttaacatcgcggacggaggtttcacagag
cttcactctctctggcagaatgaagagagagctgccacggtcaccaagaagacttatgag
atctggcatcgtcgccatgactactggctgctggccgggatcatacatcacggctacgct
cgctggcaggatgtgcaaaatgacccaagattcgccattctcaatgagccgtttaaagga
gagatgagtcgaggaaatttcctggagatcaaaaacaagtttcttgctcgaaggtttaag
ctgttggaacaggctctggtgatcgaggaacagcttagacgcgctgcgtatctgaacatg
acagaggacccgtctcacccctccatggcactcaacacgcgcttcagtgaggtggagtgt
ctggccgagtcacaccagcacctcagcaaagagtccatgtcaggaaacaagccggctaat
gcagtactgcacaaagttctcaaacaattggaggagctacttagcgacatgaaggctgac
gtcacccgcctcccagcaaccattgctcggataccacctgtcgctgtacggctgcagatg
tcagagagaagtatccttagccggctggccagccggggaccggaggtcacacagacgcag
gcgccacgttga
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