Massilia sp. YMA4: DPH57_16015
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Entry
DPH57_16015 CDS
T05528
Name
(GenBank) alpha-amylase
Organism
masy
Massilia sp. YMA4
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_25
CBM_20
fn3
RGI_lyase
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
AXA92520
UniProt:
A0A7U5Y0I1
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Position
3753803..3757684
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AA seq
1293 aa
AA seq
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MQLTKKPLVLCLAAAFSAALPAANAGTIPAAHVYHNHMPNFWPFYAVDVQAKYNATPIGA
PIRYTYDGEVINLKNNPPSGYSYYLPASLGGAIMPHDDLVSYYSHDAKTGAYQYWPMQVA
NEMQSHSGAKGQVHVTMSGAVINNVQSLTTLQNVPGYSNTSWGQGWANTFSTLKTTNNYP
TLDTIHFTGHHSMGPLVGSDYFLKDLIYQNVTLAQPYFLGSKFVSSRGFFPTELGFSDRL
IPTLAKLGIQWSVIGNNHFSRTLKDYPFATYDATGDTLTSPPNRADLRNTSTVGSWVANP
MAHEKQVVVNKFPFASTPHWVRHVDPATGAVSKIAGVPVSQNGSWYEGWEGSVTVDEIAP
YQSLEPRQFFVVAHDGDNSSGRAGSLGTWQAGHGTTCSGNGYCLGIDEYLKAKPIPANDV
QHVQDGSWIDTRDSSSDPTWYHWRLPFLIWKGQFADFNRVNGLNLAPKTNLAGQQEGATV
SLEYGWHYLERNFALLQAALNYAKTAEQVWLDAHPNHWQPSTALDKQITHAGNQLNPWML
SYPVKGNPAADYAGGANPAELGWYFLLPAMDSGFGYYDENKDDSVKPTLAFNNSLAFTKP
YVQANLAQDKTGPSAWWTQRYPYNPGSVNGSKAEGWTVQHYSNDFALYTYAHDVSGIVSA
KAMVRIHASKDISATDDTYKVYDPAALAGTPGLSITPANVGAWRAYDMNVRDLQPDMNGV
AWNATTRDTLAVLPAQEIGDLYYVYLSDYRNQLLDYYIELTDARGNVTKTEIQQVFVGAG
KYRATPGSGSGYVEDINGTVNGVYPFLVVDKTAPTVPGVPAAAAVTDRSVTLTWAASTDN
VAVTGYRVYRNGTLVGSSTGTSLVDSGLAPSTSYSYTVQAIDAASNQSAQSKALVVTTKA
ADTIAPTAPGQPAASAITSSSLTLSWSPATDNYGVSDYVIKRNGVQVGVSTTASFNDSGL
APSTAYSYTVQARDAAGNVSVASAARSATTAAGYVATVYYKLGTNWSSANLHYAPTGGTW
TAVPGVAMTPACGGWNMLTVNLGSATGLTAAFNNGSGTWDNNGGQNYALSSGISAVAGGT
VTKGSNPCTPDTTAPSTPAGLTATAVDASTVRLGWTASTDNVGVTGYYVFRNGTQIATIA
TGTSYTDSTAAASTTYSYAVKAFDAVPNVSAASAAASVTTPGGGSACQVKFTIANANTVT
GQNLRVVGNNSALGSWAPASGAALTIQGSGANVPWTGTVAVPPNTSVQYKYVKWNGSTAT
WESNQATTSGNREFTTPATCSGVIDRSDGGFKF
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaccaagaaaccgctggtcttgtgcctggcggccgccttctcggctgcgctt
cccgcggccaacgcgggaaccattcccgccgcgcacgtgtatcacaaccacatgccgaat
ttctggcccttctacgcggtggacgtgcaggccaaatacaacgcgacaccgatcggcgcg
ccgatccgctatacctacgatggcgaagtcatcaacctgaaaaacaacccgccttccggc
tacagctattacctgcctgcctcgctgggtggcgccatcatgccgcacgacgacctggtc
agctactactcgcacgacgccaagaccggggcctaccaatactggccgatgcaggtggca
aacgaaatgcagagccattcgggcgccaagggccaggtgcacgtcaccatgtccggcgcc
gtcatcaataacgtgcagagcctgacgaccttgcagaacgtccccggctacagcaatacc
agctggggccagggttgggccaatacgttcagcaccctgaagaccaccaataactacccg
acgctcgacacgatccacttcacgggccaccacagcatggggccgctggtcgggtccgac
tatttcctgaaagacctcatctaccagaacgtcacgctggcgcagccgtatttcctcggc
agtaaattcgtgtcgtcgcgtggcttcttccccaccgaactgggcttttcggaccgcctg
atcccgaccctggccaagctgggcatccagtggtccgtcatcggcaataaccatttctcc
cgtacgctcaaggactaccccttcgcgacgtacgatgcgaccggcgacacgctgacctcg
ccaccgaaccgggccgacttgcgcaatacgtcgacggtcggcagctgggtggccaatccc
atggcgcacgagaagcaggttgtcgtcaacaagttcccgtttgcttccacgccgcactgg
gtccggcacgtggacccggctaccggcgcagtcagcaagatcgccggcgtgcctgtcagc
cagaacggttcgtggtacgaaggctgggaaggctccgtgacggtcgacgagatcgcgccc
taccagtcgctcgagccacgccagttctttgtcgtcgcccacgatggcgacaattccagc
ggccgcgccggctcgctgggcacgtggcaggccggccatggcaccacgtgcagcggcaac
ggctactgcctgggtatcgacgaatacctgaaggccaagcccattcccgccaacgacgtc
cagcacgtacaggacggctcctggatcgacacgcgcgattcctcgtccgatcccacctgg
taccactggcgcctgccgttcctgatctggaagggccagttcgccgacttcaatcgtgtc
aacggcctcaacctggcgccgaagaccaacctggccggccagcaggaaggcgcgacggtg
tcgctcgaatatggctggcactacctggagcgcaactttgcgctgctgcaggcggcactg
aattacgccaagaccgccgagcaggtctggctggacgcccacccgaaccactggcagccg
agcacggcactggacaagcagatcacccacgccggcaaccagctcaatccctggatgctg
tcctatccggtcaagggtaatccggcggccgactacgcgggcggcgccaacccggccgag
ctgggctggtatttcctgctgccggcgatggattccggtttcggctactacgacgaaaac
aaggacgacagcgtcaagcccacgctggcgttcaacaactcgctggccttcacgaagccc
tacgtgcaggccaacctggcgcaggacaagaccgggccgtccgcctggtggacgcagcgc
tatccgtacaatccgggctcggtcaatggctccaaggccgagggctggaccgtccagcac
tacagcaacgacttcgcgctgtacacctatgcccatgacgtctcgggcatcgtcagcgcc
aaggcaatggtgcgcatccacgccagcaaggacatcagcgcgaccgacgacacctacaag
gtctacgatccggccgcgctggccggcacaccgggcctgtcgatcacgcccgccaacgtg
ggtgcatggcgcgcctatgacatgaacgtgcgcgacctgcagccggacatgaatggcgtg
gcctggaacgcgaccacgcgcgacacgctggccgtgctgcctgcgcaggaaatcggcgac
ctgtactacgtctacctgtcggactaccgcaaccagctgcttgactactacatcgagctg
acggatgcccgcggcaatgtcacgaagacggaaatccagcaggtcttcgtgggggccggc
aagtaccgcgcgacgccaggctcgggctcaggctatgtcgaggacatcaacggcaccgtc
aacggcgtctaccccttcctggtcgtcgacaagacggcaccgaccgtgccgggcgtgcct
gccgccgccgcggtgacggaccgttccgtgacgctgacctgggccgcgtccaccgacaac
gtggccgtgacgggctaccgcgtctaccgcaacggcacactggtcggcagcagcaccggc
accagtctggtggacagcgggctggcgccatcgacctcttacagctacaccgtgcaggcc
atcgacgcagccagcaaccagtcggcgcaaagcaaggcgctggtcgtcacaacgaaagcg
gcggataccatcgcgcccaccgcgcccggccagccggccgcgtccgcaatcacgtccagc
tcgctgacactgagctggagcccggccacggacaactatggcgtcagcgactacgtcatc
aagcgcaacggcgtgcaggtcggcgtcagcacgacggccagcttcaacgacagtggcctg
gcgccatcgaccgcctacagctacaccgtgcaggcccgcgatgcggcgggcaatgtgtcc
gtcgcgtctgcggcacgctccgcgacgacagctgcagggtatgtcgcgacggtctactac
aagctcggcacgaattggagctccgccaacctgcactacgctccgaccggcggcacgtgg
acggccgtaccgggcgtggcgatgacgccggcctgcggcggctggaacatgctgacggtg
aacctgggcagcgcgacaggtttgaccgccgcgttcaacaatggttccgggacctgggac
aacaacggtgggcagaactacgcgctgtccagcggcatctcggctgttgctggcggcacc
gtgaccaagggatcgaacccatgcacgcctgacaccaccgcgccaagtacgccggccggg
ctgactgccacggccgtcgacgccagcacggtgcgcctgggctggacggcgtcgaccgac
aatgtgggggtgaccggctactacgtgttccgcaacggcacgcagatcgccaccatcgcc
acggggacgagctacaccgacagcacggcggcggcgtccaccacctacagctacgcggtc
aaggctttcgacgccgtgccgaacgtttccgccgccagtgccgcggcatcggtcacgacg
cccggcggcggcagcgcctgccaggtgaagttcacgatcgccaacgccaacaccgtgacc
ggccagaacctgcgcgtggtgggcaataacagcgcactgggcagctgggcgccggccagc
ggcgccgcgctcacgatccagggcagcggcgccaacgtgccgtggacaggaacggtcgcc
gtaccgcccaatacgagcgtgcagtacaagtacgtgaagtggaacggcagtacggccacg
tgggaaagcaaccaggcgacgacgtccggcaatcgcgagttcacgacgccggcgacgtgc
tcgggcgtgatcgaccgcagcgacggcggcttcaagttctaa
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