Massilia sp. YMA4: DPH57_18850
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Entry
DPH57_18850 CDS
T05528
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00061
Fatty acid biosynthesis
masy00071
Fatty acid degradation
masy01100
Metabolic pathways
masy01212
Fatty acid metabolism
masy02024
Quorum sensing
Module
masy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DPH57_18850
00071 Fatty acid degradation
DPH57_18850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DPH57_18850
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
masy01004
]
DPH57_18850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masy04147
]
DPH57_18850
Enzymes [BR:
masy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DPH57_18850
Lipid biosynthesis proteins [BR:
masy01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
DPH57_18850
Exosome [BR:
masy04147
]
Exosomal proteins
Exosomal proteins of breast milk
DPH57_18850
Exosomal proteins of breast cancer cells
DPH57_18850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AXA93027
UniProt:
A0A7U5Y108
LinkDB
All DBs
Position
complement(4395066..4396763)
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AA seq
565 aa
AA seq
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MEKIWLKSYPPGVPAEIDPNQYRSLVHLLEDSFHKFGNRKAFVCMDKAITYAELDAYSKR
LGAWLQSRGMKPGARVAVMMPNVLQYPIAIAAVLRAGYTVVNVNPLYTPRELEHQLTDAG
AEAIVILENFAHTLEQVLPRTPVKHIIVANMGEMLGGLKGAIVNFVVRNVKKMVPAYSLP
NAVRFKAALAHASAMKLTPVELGQEDVAFLQYTGGTTGVAKGATLTHRNVIANVLQSEAW
SQPGVQKEPQVEQLSIVCALPLYHIFALTACALWGMRMGALNILIPNPRDIPGLIRELGK
YKFNILPAVNTLYNALVNHPGFRHLDFSGLKMANGGGMAVQKAVNDKWLAATGVSIIEGY
GLSETSPVATCNRSDSTAFTGTIGLPLPSTEISILDDDGNEVPLGQPGEIAIRGPQVMRG
YWNRPDETAKVMTPDGFFKSGDVGIMDETGYTRIVDRKKDMILVSGFNVYPNELESVVAT
HPGVLECACIGVPDEHSGEAVKLFVVRKDPNLTIDELMAFCKDNLTGYKKPKYIEFRDEL
PKTNVGKILRRALRDEMTAGAKKAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggttgaagtcgtacccgcccggcgttcctgccgagatcgatccgaat
cagtaccgctccctggtacatctgctggaagattccttccacaagttcggcaaccgcaag
gcctttgtctgcatggacaaggccatcacctacgcggaactggatgcctattcgaagcgc
ctgggcgcctggttgcaaagccgcggcatgaagccgggcgcgcgcgtggccgtgatgatg
ccgaacgtgctgcaatacccgatcgccatcgccgccgtgctgcgcgccggctataccgtc
gtcaacgtcaatccgctgtacacgccgcgcgagctggaacaccagttgaccgatgccggc
gcggaagccatcgtcatcctcgagaatttcgcgcacacgctggagcaggtgctgccgcgc
acgccggtcaagcacatcatcgtcgccaatatgggcgagatgctgggcggcctgaagggc
gccatcgtcaatttcgtcgtgcgcaacgtcaagaagatggtgccggcctattcgctgccg
aacgccgtgcgcttcaaggccgcgctggcccatgcctcggcgatgaagctgacgcccgtc
gagctgggtcaagaggatgtggcgttcctgcagtacacgggtggcacgaccggcgttgcg
aagggcgctaccttgacgcaccggaacgtcatcgccaacgtgctgcaatcggaagcatgg
tcacaaccaggcgtgcagaaggagccgcaagtcgagcagctgtcgatcgtctgcgcgctg
ccgctgtaccatatcttcgcgctgaccgcgtgcgccctgtggggcatgcgcatgggcgcg
ctgaacatcctgatcccgaacccgcgcgacattcccggcctgatccgtgaactgggcaaa
tacaagttcaacatcctgccggccgtgaacacgctgtacaacgcgctcgtcaaccacccg
ggcttccgccacctggacttctccggcctgaagatggccaacggcggcggcatggccgtg
cagaaggccgtcaacgacaagtggctggccgcgacgggcgtgtcgatcatcgagggctat
ggcctgtcggagacgtcgccggtggccacctgcaaccgctccgacagcacggcgtttacc
ggcacgatcggcctgccgctgccgtccaccgagatctccatcctggacgacgacggcaac
gaagtcccgctcggccagccgggcgagatcgcgatccgcggcccccaggtgatgcgcggc
tactggaaccggccggacgaaacggccaaggtcatgacgcccgacggcttcttcaagtcg
ggcgacgtgggcatcatggacgaaacgggctacacccgcatcgtcgatcgcaagaaggac
atgatcctggtctccggcttcaacgtatatcccaacgagctggaatcggtggtggcgacc
cacccgggcgtgctggaatgcgcctgcatcggcgtgccggacgagcattcgggcgaggcc
gtcaagctgttcgtcgtgcgcaaggatccgaacctgacgatcgacgagctgatggccttc
tgcaaggacaacctgaccggctacaagaaaccgaagtacatcgagttccgcgacgaactc
ccgaaaaccaatgtcggcaagatcctgcgccgcgcgctgcgcgacgagatgacggccggc
gccaaaaaggcggcataa
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