Pseudoduganella armeniaca: C9I28_02305
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Entry
C9I28_02305 CDS
T05378
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
masz
Pseudoduganella armeniaca
Pathway
masz00061
Fatty acid biosynthesis
masz00071
Fatty acid degradation
masz01100
Metabolic pathways
masz01212
Fatty acid metabolism
masz02024
Quorum sensing
Module
masz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C9I28_02305
00071 Fatty acid degradation
C9I28_02305
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C9I28_02305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
masz01004
]
C9I28_02305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
masz04147
]
C9I28_02305
Enzymes [BR:
masz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C9I28_02305
Lipid biosynthesis proteins [BR:
masz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
C9I28_02305
Exosome [BR:
masz04147
]
Exosomal proteins
Exosomal proteins of breast milk
C9I28_02305
Exosomal proteins of breast cancer cells
C9I28_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
WHEP-TRS
Motif
Other DBs
NCBI-ProteinID:
AVR94678
UniProt:
A0A2R4C563
LinkDB
All DBs
Position
complement(504625..506565)
Genome browser
AA seq
646 aa
AA seq
DB search
MQATTFPRRLLEHGRERPHKSAYREKHLGIWQTWTWQQVNDEVRALACGLAALGFGRGMH
LAIVGDNRPRLYWAMLAAQCLGGVAVPLYQDAPAADMAYVLADAGIRFAIVEDQEQVDKL
LELKAQYPAIAHIAYDDERGLRHYRQPELLSLTRLQEAGRAWDRANPGCFDAAIEAGQPG
DNAVILYTSGTTGKPKGVCQTHAALLAAGTGGVAFEGLTDEENVLSYLPMAWVGDCLFSF
AQALVAGFTVNCPESGETVMTDLREIGPTYYFAPPRVFENMLTQVMIRMEDAGALKRRLF
HHFMAVARRCGAELLDGRPVAWSDRIAYALGQVLVYGPLKNVLGFSRVKVAYTAGAAIGP
DLFRFYRSIGVNLKQFYGSTETCAYICLQPDGQIKFDSVGKPAPGVDVRLADNGEVLVKS
PTLMDGYYQRPEATAEAIDAEGYFHTGDAGVFDGDGHLRIIDRAADVGRMNHGAIFAPNY
VENKLKFFPFIKEAVAFGHGRDTVCAFLNIDMEAVGNWAERRGIAYAGYTDLAAHPQTYA
LMQECVEKVNADLASEALMGQTQIHRFLVLHKELDPDDDELTRTRKVRRKFIAEKYGVLI
DALYTGKPSQYISTQVKFEDGRTGTVAADLRIADCRTFPVVTAHAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaacgacgttcccacggcgcctgctggagcacgggcgcgagcggccgcacaag
agcgcctaccgcgaaaagcacctgggcatctggcagacgtggacgtggcagcaggtcaac
gacgaggtacgggcgctggcctgcggcctggccgcgctggggttcgggcgcggcatgcac
ctggccatcgtcggcgacaaccggccgcgcctgtactgggccatgctggccgcgcagtgc
ctgggcggcgtggccgtgccgctgtaccaggacgcccccgccgccgacatggcctacgtg
ctggcggatgccggcatccgcttcgccatcgtcgaggaccaggaacaggtcgacaagctg
ctcgaactgaaggcccagtatcccgccatcgcccacatcgcctacgacgacgaacggggc
ctgcgccactaccgccagcccgagctgctgtcgctgacgcggctgcaggaagcgggccgt
gcctgggaccgcgccaaccccggctgcttcgatgccgcgatcgaggcgggccagccgggt
gacaatgccgtgatcctgtacacctccggcaccacgggcaagccgaagggcgtatgccag
acccatgccgcgctgctggccgccggtaccggcggcgtcgcgttcgagggcctgacggac
gaggaaaacgtgctgtcttacctgccgatggcgtgggtcggcgactgcctcttttcgttt
gcccaggcgctggtcgccggcttcaccgtcaactgccccgagtccggcgaaaccgtcatg
acggacctgcgcgagatcggcccgacgtactacttcgcgccgccgcgcgtgttcgagaac
atgctgacgcaggtgatgatccggatggaggacgcaggcgccctgaaacgccgcctgttc
caccacttcatggcggtcgcgcggcgctgtggcgccgagctgctagacggccgcccggtg
gcctggtccgaccgcatcgcctacgcgctgggccaggtgctggtgtacggcccgctgaag
aacgtgctggggttttcgcgcgtgaaggtggcctacacggccggcgccgccatcggtccc
gacctgttccgcttctaccgctccatcggcgtcaacctgaaacagttttatggctcgacc
gagacctgcgcctacatctgcctgcagccggacggccagatcaagttcgacagcgtgggc
aaaccggcccccggcgtggacgtgcgcctggcggacaacggcgaagtgctggtgaagtcg
cccaccttgatggacggctactaccagcgcccggaagcgacggccgaggcgatcgacgcc
gaaggctacttccacaccggcgacgccggggtattcgacggcgacggccacctgcgcatc
atcgaccgcgccgccgacgtgggccgcatgaaccacggcgccatcttcgcgcccaactac
gtcgagaacaagctgaagttcttcccgtttatcaaggaagccgtcgcgttcggccatggc
cgcgataccgtctgcgccttcctcaacatcgacatggaggcggtcggcaactgggccgag
cggcgcggcatcgcctatgccggctacacggacctggccgcgcatccgcaaacgtatgcg
ctgatgcaggaatgcgtcgagaaggtcaatgcggacctggccagcgaggcgctgatgggg
cagacgcagatccaccgcttcctcgtgctgcacaaggaactggacccggacgacgacgag
ctgacgcgcacgcgcaaggtgcgccgcaagttcatcgccgagaaatacggggtgctgatc
gacgcgctgtacaccggcaaaccgtcgcagtacatcagcacgcaggtgaagttcgaggac
ggccgcaccggcacggtcgcggccgacctgcgcatcgccgactgccgcacgttcccggtc
gtcaccgcccacgccgcatga
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