Pseudoduganella armeniaca: C9I28_06370
Help
Entry
C9I28_06370 CDS
T05378
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
masz
Pseudoduganella armeniaca
Brite
KEGG Orthology (KO) [BR:
masz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masz03009
]
C9I28_06370
Enzymes [BR:
masz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
C9I28_06370
Ribosome biogenesis [BR:
masz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C9I28_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_23
NusB
Methyltr_RsmF_N
PCMT
CMAS
Motif
Other DBs
NCBI-ProteinID:
AVR95384
UniProt:
A0A2R4C6Z9
LinkDB
All DBs
Position
1442621..1444243
Genome browser
AA seq
540 aa
AA seq
DB search
MNKRPTLTLKAKSAPAKKASAPRPPRPAGKPTPPPKAAAAAPAQPPRSPAAPASGTPWNK
DAIRRHAPRAGKPATPPAPKMGTAPAPDPSGLRASHHRDLKPALQTTYKAELKPDSLAFA
LLGAATAVVQVRGGTALPQALTGVFGAQEATAQGRGAIQDIAYRAMRQLGRSDALVAAMA
PKAPEPLVTALLACALPLMQADAAGVTPYEAFTVVDQAVTAAGSHPDTVRAKGMVNALLR
RFLRERDTLLAEVGLQPVARYNYPQWWIDAAITAYPQEWQRILAAGDAAPPLTLRVNARK
GSVDDYLAMLAEAGIGARQVGPFAVRLDKPVGVHAIPGFDAGLVSVQDAGAQLAAPLLDL
QDGMRVLDACAAPGGKTCHMLELADVQVTALDADPRRLARVGENLERLGLSATLQAAEAQ
ARGWWDGAGFDRILADVPCTASGIVRRHPDIRWLRRKADTIQLATLSAEILDNLWQMLRP
NGKLLFVTCSLWPQESEAQAAAFAVRNRATRLDAPGQLLPVGAAEQDHDGLFYALFQKDA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgtccgacgctgaccctgaaggcgaagtcggccccggccaagaaggcaagc
gcgccgcgtccgccgcgcccggcaggcaagccgaccccgccgccgaaagcggccgccgcc
gcgccagcccagccgccacgcagcccggccgcacctgccagcggcacgccctggaacaag
gacgccatccgccggcacgcgccgcgcgccggcaagccggccaccccgccggcgccgaag
atgggcacggcccccgcgccggacccgtccggcctgcgcgccagccaccaccgcgacctg
aagccggcgctgcagacgacctacaaggccgagctgaagcccgattcgctggcgttcgcg
ctgctgggcgccgccaccgccgtcgtgcaggtgcgcggcggcaccgcgctgccgcaagcc
ctgacgggcgtgttcggcgcgcaggaagccacggcgcagggccgcggcgcgatccaggac
atcgcctaccgtgccatgcgccagctgggccgcagcgatgcgctggtggccgcgatggcg
ccgaaggcgccggagccgctggtgacggcgctgctggcctgcgcgctgccgctgatgcag
gcggacgccgccggcgtcacgccgtacgaggcgtttacggtcgtcgaccaggcggtcacg
gcggccggctcgcatccggacacggtgcgcgccaagggcatggtcaacgcactgctgcgc
cgcttcctgcgcgagcgcgacacgctgctggccgaggtgggcttgcagccggtggcgcga
tacaactacccgcagtggtggatcgacgcggccatcacggcctatccgcaggagtggcag
cgcatcctcgccgcgggcgacgcggcgccgccgctgaccctgcgcgtgaacgcgcgcaag
ggctcggtggacgattacctggccatgctggccgaggccggcatcggcgcacgccaggtc
ggtccgtttgccgtgcggctggacaagccggtcggcgtacatgcgatcccgggcttcgat
gcgggcctggtctcggtgcaggatgccggcgcccagctggccgcgccgctgctggacctg
caggacggcatgcgcgtgctggacgcctgcgcggccccgggcgggaaaacctgccacatg
ctggagctggccgacgtgcaagtcacggcgctcgatgccgacccgcgccggctggcccgg
gtgggcgagaaccttgagcggctgggcctgtcggccacgctgcaggcggccgaggcgcag
gcgcgcggctggtgggatggcgcaggcttcgaccgcatcctggccgacgtgccgtgcacg
gcctccggcatcgtgcgacggcatcccgatatccgctggctgcgccgcaaggccgacacg
atccaacttgcaacactttcggccgaaattctcgacaatctttggcagatgctgcggccc
aatggtaaattgctgttcgtgacatgttcgttgtggccgcaggaatccgaggcgcaggcg
gccgctttcgcggtgcgcaatcgcgccacgcgactcgatgcgcccggtcagctgctgccc
gtgggcgcggccgaacaggatcacgatggtttgttttacgcactgttccagaaagatgcg
tga
DBGET
integrated database retrieval system
