Micromonospora aurantiaca: Micau_0484
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Entry
Micau_0484 CDS
T01296
Name
(GenBank) DNA polymerase LigD, ligase domain protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mau
Micromonospora aurantiaca
Pathway
mau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Micau_0484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mau03400
]
Micau_0484
Enzymes [BR:
mau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Micau_0484
DNA repair and recombination proteins [BR:
mau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Micau_0484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_OB_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ADL44051
UniProt:
D9T7L9
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All DBs
Position
493028..493987
Genome browser
AA seq
319 aa
AA seq
DB search
MRNYSQEVPGAPLKPMLATTGQLPAGAAWSYEFKWDGVRALADISRGDRHFYARSGVEIT
TAYPELLNLAEQVGDALLDGEVVLFTDGQPSFTALAERMHVRNPAKAARLAATVPVTYMI
FDLLRLDGVDLTARPWRERRAALESLGLGAARWAVPPVFGDGPATYAAAGEHGLEGVMAK
RVDSLYRPGVRSLDWVKVKLEVTADFVVGGWRPGARRVGGLLVGVPGPDGRLVYRGRVGG
GIGAALERELLRELEPLRSTDSPFAAGVPREDARGAIWVTPRIVVEVKYGQRTPDGRLRF
PRILRLRPDKPPEEVDDAL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaactacagtcaggaggtgcccggcgcgccgttgaagccgatgctcgcgacgacc
gggcagctcccggccggcgccgcctggtcgtacgagttcaaatgggacggcgtccgcgcg
ctcgccgacatctcgcgcggcgacaggcacttctacgcccgctccggcgtcgagatcacc
accgcgtacccggaactgctcaacctggccgagcaggtcggcgacgcgctgctcgacggc
gaggtcgtcctcttcaccgacgggcagccctcgttcaccgcgctcgccgagcggatgcac
gtccgcaacccggccaaggcggcgcggctggcggcgacagtacccgtcacgtacatgatc
ttcgacctgttgcggctcgacggcgtcgacctgaccgcccggccgtggcgggagcggcgg
gcggcgctggagtcgctcgggctcggcgccgcccggtgggcggtgccgccggtcttcggc
gacggcccggccacctacgcggcggccggcgagcacgggctggaaggggtgatggccaag
cgggtcgactcgctctaccggcccggcgtgcgctcgctggactgggtgaaggtcaagctg
gaggtcaccgccgacttcgtggtcggcggctggcggcccggcgcgcggcgcgtcggtggc
ctgctggtcggcgtgcccggcccggacggacggctggtctaccgggggcgggtcggcggc
gggatcggcgcggcgctcgaacgggaactgctgcgcgagctggaaccactgcgctccacc
gactcgccgttcgccgccggcgtgccgcgcgaggatgcccggggcgcgatctgggtaact
ccccggatcgtggtggaggtcaagtacggccagcgcacgccggacggccggctgcgcttc
ccgcgcatcctgcgcctgcgcccggacaagccgcccgaggaggtcgacgatgccctctga
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