Micromonospora aurantiaca: Micau_1144
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Entry
Micau_1144 CDS
T01296
Name
(GenBank) DNA ligase D, 3'-phosphoesterase domain protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mau
Micromonospora aurantiaca
Pathway
mau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Micau_1144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mau03400
]
Micau_1144
Enzymes [BR:
mau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Micau_1144
DNA repair and recombination proteins [BR:
mau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Micau_1144
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_N
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
ADL44706
UniProt:
D9TD68
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All DBs
Position
complement(1159346..1160380)
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AA seq
344 aa
AA seq
DB search
MADRLEEYRRKRDAARTPEPVPERAPGRKRSARRAPRFVIQQHHARSLHWDLRLEHDGVL
ASWAVPRGLPRDPGRNHLAVHTEDHPMEYLTFHGEIPAGEYGGGRMIVHDTGTYRAEKWR
DDEVIVVLDGERTKGRYVLFATGGRGRDWMIRRTDPAPEGWTPMPELVRPMLPAEGGRLP
RDAAAWGYELRWAGVRAMAYVSGGRLRLLDGDDTEVTGDYPWTRAMAEALAPAEAVIDGV
LVRIDPAGRVRPPTRRDGQFLAVDLLWLEGVSSLDVPYAQRRDLLDGLALTGPHWQTPPW
FPGVGADALRAAREQGLPGVVAKRLDSPYEPGRRSRHWLSIDAS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggctggaggagtaccggcggaaacgggacgccgcgcgtaccccggaaccg
gtgcccgagcgggctcccgggcggaagcggtcggcgcggcgcgcaccccgcttcgtcatc
cagcagcaccacgcccggagcctgcactgggacctgcggctggagcacgacggcgtgctg
gcctcctgggccgtgccgcgcggcctgccccgcgacccgggccgcaaccatttggccgtg
cacaccgaggaccacccgatggagtacctgacgttccacggggagatccccgccggggag
tacggcggcgggcggatgatcgtgcacgacaccggcacctaccgcgcggagaagtggcgc
gacgacgaggtgatcgtggtgctggacggcgagcgcacgaagggccggtacgtgctgttc
gccaccggcggccggggccgggactggatgatcaggcgtaccgacccggcgccggagggc
tggacgccgatgcccgagctggtccgcccgatgctgcccgccgagggcgggcggctgccg
cgcgacgccgccgcctgggggtacgagctgcgctgggcgggcgtgcgcgcgatggcgtac
gtctcgggcggccggctgcggctgctcgacggcgacgacacggaggtcaccggggattac
ccgtggacgcgggcgatggccgaggcgctggccccggccgaggcggtgatcgacggcgtg
ctggtaaggatcgacccggccgggagggtccgtccgccgacccggcgcgacgggcagttc
ctcgccgtcgacctgctctggctggagggcgtgtccagcctcgacgtgccgtacgcgcaa
cgccgtgacctgctcgacggtctggcgctcaccggtccgcactggcagactccgccgtgg
ttcccgggagtcggcgcggacgccctacgggccgcccgtgagcaggggctcccgggagtg
gtggcgaaacgcctcgactccccgtacgagccgggccggcgcagccggcactggctgagc
atcgacgcgagctga
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