KEGG   Micromonospora aurantiaca: Micau_4966Help
Entry
Micau_4966        CDS       T01296                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mau  Micromonospora aurantiaca
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mau00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Micau_4966
   03410 Base excision repair
    Micau_4966
   03420 Nucleotide excision repair
    Micau_4966
   03430 Mismatch repair
    Micau_4966
Enzymes [BR:mau01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Micau_4966
    6.5.1.6  DNA ligase (ATP or NAD+)
     Micau_4966
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Micau_4966
DNA replication proteins [BR:mau03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Micau_4966
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Micau_4966
DNA repair and recombination proteins [BR:mau03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Micau_4966
   NER (nucleotide excision repair)
    Other NER factors
     Micau_4966
   MMR (mismatch exicision repair)
    Other MMR factors
     Micau_4966
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(5600346..5601929)
Genome map
AA seq 527 aa AA seqDB search
MRFAELAATSAAVGATSGRRAKVELLAAALRGLEPGEIPAGAGYLAGELRQRQTGVGWAG
LRDLPPPAAEPTLTVAAVDAAIEEISRVAGAGSQARRRELVGRLFAAATADEQRLLTGLF
RGELRQGAQAGLLADAVARAADVPVTAVRRALLLAGDLRAVAVAALTGGAAALAGFGLQV
GRPLAPMLAQSAPSVDEALTATGVPAMVDVKLDGIRIQVHRSGPDIAVFTRSLDEITGRL
PQVVAAVRALPARELVLDGEAIGLDAAGRPLPFQETSSRAARRTTPSTTGQAPVAPAVLA
AAERTGEPVLTPYFFDLLHLDGTDLIDAPGRERWAALAGAVDASLLVDRIEVDDVEQAAT
AFAAAVDAGQEGVVVKDPAAPYDAGRRGSAWVKVKPRHTLDLVVLAVEWGSGRREGWLSN
LHLGARDPRTGEFVMLGKTFKGLTDELLRWQTERFLSLAVEKGDWVVRVRPEQVVEIAFD
GVQTSSRYPGGMALRFARVLRYRDDKTAAEADTIDAVRAIHAGRVTG
NT seq 1584 nt NT seq  +upstreamnt  +downstreamnt
gtgcgtttcgcggagctggcggccacctcggccgcggtcggggccaccagcggccgacgg
gccaaggtggagttgctggccgccgcgctgcgcgggctggagccgggcgagatcccggcc
ggtgccggttatctcgccggtgagctgcgccagcgtcagaccggtgtcggctgggcgggc
ctgcgtgacctgcctccgccggccgccgagccgacgctcaccgtcgccgccgtcgacgcg
gcgatcgaggagatctcccgcgtcgccggggccggttcgcaggcccggcgccgggaactg
gtcggccgtctcttcgccgccgccaccgccgacgagcagcgcctgctgaccggcctgttc
cggggcgagctgcgccagggcgcgcaggccgggctgctggccgacgcggtcgcgcgcgcc
gccgacgtcccggtcacggccgtccggcgggccctgctgctcgccggtgacctgcgggcg
gtggcggtcgcggcgctcaccggcggcgccgccgcgctggccgggttcgggctccaggtg
ggccggccgctcgcgccgatgctggcgcagagcgcgccctcggtcgacgaggcgctcacc
gccaccggcgtgccggcgatggtcgacgtgaagctcgacggcatccgcatccaggtgcac
cgctccggcccggacatcgcggtcttcacccgcagcctggacgagatcaccggccggctg
ccccaggtggtggccgccgtccgcgcgctgcccgcccgcgagctggtgctcgacggcgag
gcgatcgggctggacgccgccggccggccgctgccgttccaggagacgtccagccgggca
gcccggcgcaccacgcccagcaccaccgggcaggcaccggtcgcgcccgccgtgctggcc
gccgccgagcgcaccggcgaaccggtgctcacgccgtacttcttcgacctgctgcacctc
gacggcaccgacctgatcgacgcgcccggacgggagcggtgggcggccctggccggcgcg
gtcgacgcctcgctgctcgtcgaccgaatcgaggtggacgacgtggagcaggcggccacg
gcgttcgccgcggctgtcgacgccggtcaggagggcgtggtggtcaaggacccggccgcg
ccctacgacgccggccggcgcggctcggcctgggtcaaggtcaagccgcggcacacgctc
gacctggtggtcctcgcggtcgagtggggcagcggccggcgggagggctggctgtccaac
ctgcacctcggcgcccgcgatccgcgcaccggcgagttcgtcatgctcggcaagacgttc
aaggggctcaccgacgagctcctgcgctggcagaccgaacggttcctgtcgctcgccgtg
gagaagggcgactgggtggtgcgggtccggccggagcaggtggtcgagatcgcgttcgac
ggggtgcagacgagcagccggtacccgggcggcatggcgttgcgcttcgcccgcgtgctg
cgctaccgcgacgacaagaccgccgccgaggcggacaccatcgacgcggtccgcgccatc
cacgccggccgggtcaccggctga

DBGET integrated database retrieval system