Mesocricetus auratus (golden hamster): 101842797
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Entry
101842797 CDS
T08306
Symbol
Col6a6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X4
KO
K06238
collagen type VI alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04151
PI3K-Akt signaling pathway
maua04510
Focal adhesion
maua04512
ECM-receptor interaction
maua04820
Cytoskeleton in muscle cells
maua04974
Protein digestion and absorption
maua05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101842797 (Col6a6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101842797 (Col6a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101842797 (Col6a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101842797 (Col6a6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101842797 (Col6a6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101842797 (Col6a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maua04147
]
101842797 (Col6a6)
00536 Glycosaminoglycan binding proteins [BR:
maua00536
]
101842797 (Col6a6)
Exosome [BR:
maua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101842797 (Col6a6)
Glycosaminoglycan binding proteins [BR:
maua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101842797 (Col6a6)
Hyaluronan
Extracellular matrix or blood plasma proteins
101842797 (Col6a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Radical_SAM
VWA_CoxE
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
101842797
NCBI-ProteinID:
XP_021085607
EnsemblRapid:
ENSMAUG00000011745
UniProt:
A0A3Q0CXX6
LinkDB
All DBs
Position
Unknown
AA seq
1615 aa
AA seq
DB search
MLLILFLAMICFHVCVNQDSGPEYADVVFLVDSSDELGSKSFPFVKNFLSKLISSLPIEA
NKYRVALAQYSDALHNEFQLGTFKNRNPMLNHLKKNLGFIGGTLKIGNALQEAHRTYFSA
PTNGRDRKQFPPILVVLASAESEDDVEEASKALREDGVKIISVGVQKASEENLKAMATSQ
FHFNLRTARDLSAFAPNMTQIIKDVTKYREGMADDIIVEACQGPSVADVVFLLDMAINGS
QENLDHLKAFLEESVTALDIKENCMRVGLVAYSNETRVISSLSRGVNKTEVLQQIQGLSP
DVGQAYTGAALRKTRKEVFSAQRGSRKNQGVPQIAVLVTHRVSEDNVTKAAVNLRREGVT
IFTMGIEGASPDQLAKIASHPAEQFVSKLSNFSELATHNQTFLKKLRNQITHTVSVFSER
TETLKSACVDTEEADIYLLIDGSGNTQPTDFHEMKTFLSEVVGMFNIAPHKVRVGAVQYA
DTWDLEFGINKYTNKPDLGKAIENIRQMGGNTNTGAALNFTLKLLQKAKKQRGSKVPCHL
VVLTNGMSQDSVLEPANRLREENIRVYAIGVKEANQTQLREIAGEEKRVYYVHEFDALRD
IRNQVVQEICAEEACRDMKADIMFLVDSSGSIGPENFSKMKTFMKNLVSKSQIGADRVQI
GVVQFSHENREEFQLNTFMSQSDISNAIDQMSHIGETTLTGSALTFVSQYFSPDKGARPN
VRKFLILITDGEAQDIVREPAVALRNEGVIIYSVGVFGSNVTQLEEISGKPEMVFYVENF
DILQHIEDDLVLGICSPREECKRIEVLDVVFVIDSSGSIDYQEYNIMKDFMIGLVKKADV
GKNQVRFGALKYADDPEVLFYLDELGTKLEVISVLQKDQPMGGNTYTAEALAFSDHMFTE
ARGSRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANSWELLAMAG
SSDKYYFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPNDFQKMKE
FLASVVQDFDVSLNRVRIGVAQFSDSYRSEFLLGAFTGEKAITTQIESIQQIFGYTHIGE
ALRKVRYYFQPDTGSRINAGTPQVLLVLTDGRSQDEVAQAAEELRHRGVDIYSVGIGDVD
DQQLIQITGTAEKKLTVHNFDELKKVKKRIVRHICTSGGESNCFVDVVVGFDISSQQRGQ
TLLEGQPWMEAYLQDIFRAISSLNGVSCEVGTETQVSIAFQVTNAMERYPSKFEIYSENI
LSSLQGVTVNGPSRLNTNLLNSLWDTFQNKSAARGKVVLLFSDGLDDDIEKLEQKSDELR
KEGLNALITIAVDGAANTGDLADLLYIEFGKGFEYRTQFTIGMRNLGSQLSKQLINVAER
TCCCLLCKCTGGDGTMGNPGSAGKKGPPGFKGSDGYLGEEGIAGERGASGPMGEQGTKGC
VGTKGPKGTRGLSGEEGEVGEDGIDGLNGEQGDSGIPGRRGEKGDEGSQGSPGKRGTSGD
RGAKGLRGDPGIPGIDNNIQGPKGLKGDHGRQGRRGWPGPPGTPGSRKKTVVHGRRGHIG
PQGNPGITGPDGLEGSPGLKGPQGPRGEAGEKGEKGFLGMKGPQDPKEYPRLLVE
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcattttgttcctggcaatgatttgtttccatgtttgtgtgaaccaagactct
ggccctgagtatgcagatgtggtgtttctggtggacagctctgatgagttggggagtaag
tccttcccatttgtgaaaaatttcctcagcaagttgatcagcagcctccccatagaggcc
aacaagtaccgcgtggccctggcccagtacagcgatgctctccacaatgagttccagctg
ggcaccttcaagaacaggaaccccatgctgaaccacctgaagaagaacttggggttcatc
ggtggtaccctgaagataggcaatgccctgcaagaggctcacaggacctatttctccgct
cccacaaatggaagagacaggaaacagttccccccaatcctggtggtgctggcttcagcc
gagtctgaggatgatgtggaagaggcttcgaaggcccttcgggaagatggggtgaaaatc
atctcggtgggggtgcagaaggcttctgaggaaaacctgaaggccatggccacatcccag
ttccatttcaacctcaggactgccagagacctcagtgcgtttgccccaaacatgacacag
atcatcaaggacgtgactaagtacagggaaggaatggctgatgacattattgtagaagct
tgccaaggcccttctgtggctgatgtcgtgttcctgttggatatggccattaatggcagc
caggagaaccttgaccatctgaaagcatttctggaagaaagtgtcactgcccttgacata
aaggaaaattgcatgagagttggcctggtggcctacagcaatgagacgagggtgatcagt
tccctgagcaggggtgtcaataagacagaggtcctgcagcaaatacagggcctgtctccc
gacgtagggcaggcctacactggggctgccctcagaaagaccaggaaggaagtcttcagt
gcacagaggggcagtcggaagaaccagggggtgcctcagattgctgtactggtgacccac
agagtttcagaggacaacgtgaccaaggctgctgtcaacctccggcgagagggagtgacc
atctttaccatgggcatcgagggggccagtccagaccaactggcaaaaatcgcatctcac
cccgcagaacaatttgtctccaaactgagcaacttctctgagctggccacccacaaccag
acattcctgaagaagctgcggaaccaaatcacacacacagtctctgtcttctcagaacgg
accgagaccctcaaatctgcctgtgtggacacagaagaagcagatatctatctgctcatt
gatggttcagggaacacccagcccacagacttccacgaaatgaagaccttcctgtcagag
gtggtgggcatgttcaacattgctccccacaaggtacgggttggggctgtgcagtacgct
gacacctgggacttggagttcgggatcaataaatacaccaacaagcctgacttgggcaaa
gccatcgagaacatcagacagatgggcgggaacaccaacacaggtgcagccctgaacttc
acactgaagctgctacaaaaagcaaagaagcagcgaggaagcaaagtgccgtgccacctt
gttgttctgacaaatggcatgtcccaggacagtgtcctggagcctgctaacaggctgaga
gaggaaaacatccgtgtgtatgctatcggagtcaaggaagccaaccaaacgcagctgcgg
gagattgcgggagaggaaaagcgagtttactacgtgcatgaattcgatgccctgagggac
ataaggaaccaggtggttcaagagatctgtgcagaagaagcctgcagagacatgaaagca
gacatcatgtttctggtggacagttctggcagcataggacctgaaaacttcagcaagatg
aagacgtttatgaagaacctggtgagcaaatcccagattggggcagaccgggtgcaaatt
ggcgtggtccagttcagccacgaaaacagggaggagtttcagctcaacacattcatgtcc
caaagtgacatttccaacgccatcgaccaaatgtctcacattggagaaacaacattgaca
ggcagtgccctgacgtttgtgtcccagtacttcagtcccgacaaaggggcccggcccaat
gtcaggaagtttctcattctcatcacagacggtgaggctcaggacatagtgagggaacca
gcggttgcacttaggaatgaaggtgtgattatctactccgtgggagtattcggctctaat
gttacccagctcgaggagatcagtgggaaaccagagatggttttctatgttgagaacttt
gacattctgcagcatattgaagatgaccttgttctgggaatatgcagtccccgtgaagaa
tgcaagaggattgaagttttggatgttgtgtttgtcatcgatagctctggcagcatcgac
tatcaagaatataacattatgaaggactttatgatcggcctggtgaaaaaagctgacgtg
ggcaagaatcaggttcggtttggagctctgaagtatgctgatgacccagaagtgctgttt
tatctggatgagctaggcacaaagttggaggtgatttcggtgctccagaaggaccagccc
atggggggcaatacttatactgctgaggccctggccttctcagatcacatgttcaccgaa
gcccggggcagtcgtctacacaagggagtcccccaagttctcattgtgatcaccgacgga
gaatctcatgatgcagacaagctcaacgccactgccaaggcactgagggacaaaggcatt
ctcgtcctggccgtggggattgctggtgccaatagctgggagctgttagccatggcaggg
tcaagtgacaagtattactttgtagagacgtttggaggcctgaaggggatattttcagac
gtgtcagccagtgtctgtaattcttcaaaagtcgattgtgaaattgaaaaggttgacctc
gttttcctcatggatggttcaaacagcatccatccgaatgacttccagaagatgaaggag
tttctggcatcagtcgttcaagactttgatgtcagcctcaacagagtgcgcataggagtg
gcacagttcagcgacagctataggtcagagtttctgctgggggcgttcacaggggagaag
gcgatcaccacccagattgagagcatccagcagatctttggatacacccacattggcgaa
gcactcaggaaggtgaggtactacttccagccagacaccggcagcaggatcaatgcaggc
acccctcaggtgctgctggtcctcacggacggccggtcccaagacgaggtagctcaggcc
gcggaggagctgagacacaggggtgtggacatctactcagtgggcatcggggacgtagat
gaccagcagctgatccagatcacagggacagcagagaaaaaattgacggtccataacttt
gacgagctgaaaaaggtgaaaaaacggatcgtgcgccacatctgtacctcgggtggtgag
agcaattgttttgtggatgtagtggttggatttgacatctcaagtcagcagagggggcag
actttgctcgaaggtcagccctggatggaggcctacctccaagacatcttccgtgccatc
agctccctcaatggggtgagctgtgaagtgggcacagagactcaggtgagcatagctttt
caagtgacaaacgctatggaaagatacccttccaagttcgagatctacagtgagaacata
ctaagcagcttgcaaggtgtgacagtcaatgggccatctcgcctcaacacaaacctgctg
aattctctgtgggatacttttcagaataagtccgctgctcgagggaaggtggtccttcta
ttttcagatggattggatgatgacattgaaaaacttgaacagaaatcggatgaactcaga
aaggaaggcctgaatgccctcataaccattgctgtggatggagctgccaataccggcgac
ctggctgaccttctctacattgaatttgggaaaggatttgagtaccgaacacagttcaca
attggtatgaggaaccttggaagccagctgtcaaagcaactaatcaacgttgcagaaagg
acctgttgctgtttgctctgcaagtgcacaggaggggacggcaccatggggaatccaggc
tcagcagggaaaaagggacccccaggttttaaaggcagtgatggctacctgggagaagag
ggcattgctggagaaagaggagcctccggaccaatgggagagcaaggtactaagggatgc
gttggcaccaaagggcctaagggaaccagaggactcagtggagaagagggagaagtcggg
gaagatgggattgatggattaaatggagaacagggtgacagtgggattcctggaagaaga
ggagaaaagggtgatgagggatctcagggaagcccaggcaagagagggacttctggtgac
cgtggagcaaagggcctgcgaggagatccaggaattcctgggattgacaataacatacaa
ggacccaagggcttgaaaggagaccatggaagacaagggagaagaggatggccaggccct
cctgggacaccaggctcaagaaaaaagacggtagttcatggccgaaggggacatataggc
ccacagggaaatccaggcatcacaggcccagatggacttgaaggctcaccgggacttaag
ggccctcagggcccacgaggagaggctggtgagaaaggagaaaaaggatttctaggaatg
aaaggtcctcaggatccaaaagagtatccaagactgttagtggaataa
DBGET
integrated database retrieval system
