KEGG   Microbacterium aurum: BOH66_07730Help
Entry
BOH66_07730       CDS       T04977                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
maur  Microbacterium aurum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:maur00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BOH66_07730
Enzymes [BR:maur01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BOH66_07730
DNA repair and recombination proteins [BR:maur03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BOH66_07730
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1557878..1560331)
Genome map
AA seq 817 aa AA seqDB search
MAGAGQVVEVGGRRLRLTNLDKVLYPEAGTTKAEVIDYYSRIAPWMLPHLAGRPVTRLRW
PEGTGHAPFFAKDLEAGAPDWLRRRAIDHSSGAKDYPLVDDVAGLVYLAQVASLELHTPQ
WRFDAAGSSAGSSRRAPDRLVLDLDPGPGAGLAECAEVARWAREILQGVGMDPLPVTSGS
KGIHLYAALDGTRLSDEISAFARELARALEADHADLVVSAMTKAVRDGKVFVDWSQNNGA
KTTIAPYSLRGRAQPMVAAPRTWDELDDPVLRHLRFDEVLERVATTGDLLAPLAPAAADP
LTAYVGKRAADATPEPFPTSAARVAATGASGAALRFVIQEHHARRLHFDLRLERDGVLES
WAVPRGIPETTDRNHLAVMTEPHPMEYLTFAGEIPAGQYGAGSMTVWDTGTYEAEKWRED
EIIFTLTGRPGGPLGVVRLALIRTSGAGEKSQWLLHLMAPRPAAAPSPAGSSAAPESPAA
PASSPATVRPRGATAADDAPMLAVNATPARARAAAARRSEAWVEFKWDGIRAIGTWDGRR
LRLRARSGTDITARYPELTAVDAGLGAAPAVIDGEIVAMDAAGRPSFSRLQSRMHLTTPR
EIERESRRVPATYILFDVLRAADADVAARPLRERRGILEEIAADAVPAIVLPPVAADVDA
ALQTARELDLEGIVVKDPDAPYRRGARSEEWLKVKLTRTQDVVIGGIRPGKGGRTGAIGS
LLLGIPEAGELRYVGRVGSGFSERELTRLADVLTPLRTDENPFTGVPAADASDALWVRPQ
RVAEVEFAEFTPGGTLRHARWRGLRPDVAPDAVRREV
NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt
atggcaggcgcggggcaggtcgtcgaggtggggggccgtcgcctgcggctgaccaatctg
gacaaggtgctctaccccgaggcgggcacgacgaaggccgaggtcatcgactactactcg
cggatcgcgccgtggatgctgccacacctcgccggccgtccggtcacgcgcctgcgctgg
cccgaggggaccggacacgccccgttcttcgcgaaggatctcgaagccggcgcccccgac
tggctgcgacgccgggcgatcgaccactcctcaggggcgaaggactacccgctcgtcgac
gacgtcgccggactcgtgtacctcgcccaggtcgcgagcctcgagctgcacacgccgcag
tggcgtttcgacgccgcggggagctccgccggttcgtcacggcgcgcgccggaccgcctc
gtcctcgacctcgatcccggacccggtgcgggcctcgccgaatgcgccgaggtcgcgcgg
tgggcacgtgagatcctgcagggtgtcggcatggatccgctgcccgtgacgagcgggtcc
aaggggatccacctgtacgcggcgctggacggcacgcgcttgagcgacgagatctcggca
ttcgcccgcgagctcgcccgggcgctggaggccgaccacgccgatctcgtcgtgagcgcg
atgacgaaggccgtccgcgacggcaaggtcttcgtcgactggagccagaacaacggcgcg
aagaccaccatcgcgccgtactcgctgcgaggacgcgcccagccgatggtcgcagcgccc
cgcacgtgggacgagctcgacgatccggtcctgcgacacctgcgcttcgacgaggtgctc
gagcgcgtggcgaccacgggcgatctgctcgccccgcttgctcccgcggccgccgatccg
ctcacggcctacgtcggcaagcgcgcggccgacgcgacgccggagccgttcccgacctcc
gccgctcgcgtcgccgctacgggcgcgtccggcgccgcgctccggttcgtcatccaggag
caccacgcacggcggctgcacttcgatctccggctcgaacgggacggcgtgctggagagc
tgggcggtcccccgcggcatccccgagacgaccgatcgcaaccatctcgcggtcatgacc
gagccgcacccgatggagtacctgaccttcgccggcgagatccccgccggacagtacggc
gcgggcagcatgacggtgtgggacaccggcacgtacgaggccgagaagtggcgcgaggac
gagatcatcttcacgctgaccggccgccccggcgggccgctcggtgtcgtgcgcctggcc
ctcatccgcacctccggcgccggcgagaagtcgcagtggctgctgcacctgatggcccct
cgccccgcggcggcgccctcgccggcgggatcatcggcggcgccggaatcgccggcagcg
ccagcgtcttcgccggcgacggtgcgcccgcggggcgcgacggcggcggacgacgcgccg
atgctcgcggtgaacgccacgccggcacgggcacgcgccgccgcggcgcgtcgcagtgag
gcgtgggtggagttcaaatgggacggcatccgggcgatcggcacgtgggacggtcggcgg
ctgcgcctgcgcgcgcgcagcggcaccgacatcaccgcgcgctaccccgagctgaccgcc
gtggacgcggggctcggcgccgccccggccgtgatcgacggtgagatcgtggcgatggat
gccgcggggcggccgagcttctcccggctccagtcgcgcatgcacctgacgacgccccgc
gagatcgaacgagagtcccgccgggtgccggcgacctacatcctgttcgacgtgctgcgc
gccgcggacgccgacgtcgccgcccggccgttgcgcgagcgccgcggcatcctcgaggag
atcgccgccgacgccgttcccgcgatcgtgctgccgccggtcgcggccgacgtggatgcc
gccctgcagaccgcgcgggagctcgacctcgagggcatcgtcgtgaaagaccccgacgcc
ccctaccgccgcggcgcccgcagcgaggaatggctgaaggtcaagctgacgcgcacccag
gacgtcgtgatcggcggcatccgccccggcaaaggtggtcgcaccggcgccatcggctcc
ctgctgcttggcatcccggaggccggcgagctgcgctatgtggggcgtgtggggtcgggc
ttcagcgaacgggagctgacgcgactggccgacgtgctcacgccgcttcgcaccgacgag
aacccgttcacgggcgttcccgccgcggacgcgtcggacgccctgtgggtgcgtccacaa
cgagtggccgaggtcgagttcgccgagttcaccccgggcggcacactgcgccatgcgcgc
tggcgggggctgcgccccgatgtcgcccccgacgccgtgcgccgcgaggtctga

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