Mycobacterium avium subsp. paratuberculosis E1: RC58_03320
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Entry
RC58_03320 CDS
T03787
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AJK77450
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Position
complement(736546..738072)
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AA seq
508 aa
AA seq
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MLFDVATASADVGGTPSRLTKVARIADLLRRAAPNAALVAIVVSWLSGELRQRQIGVGWA
ALRSRPPAAAHPTLTVVAVDAAFAEIGAVAGKGAQARRAALLNALFAAATETEQTFLLRL
LGGELRQGALAGIMADAVARAAGIPAAAVQRAAMLGGDLPAVAAAALSGEASALDAFTLR
VGRPVAPMLAQTAAGVAQAIERHGGQAIFEAKLDGARVQIHRAGDQVTVYTRSLDDVTAR
LPEVVTATLALPVEALIADGEAIALRPDNSPQRFQVTASRFGRSLDVAAAVAAQPLSVFI
FDILHCDGIDLLDAPTTDRLAALDALVPPAQRVDRLLTADPDAAGRFLEATLAAGHEGVM
AKAPGAPYQAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRRGKLSNIHLGARDPATGEFV
MVGKTFKGMTDAMLDWQTARFTELAVGGTDGYVVRVRPEQVVEVAVDGVQKSSRYPGGLA
LRFARVLRYRDDKGPAEADTIDAVRALY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ctgcttttcgacgtggcgacggcgtcggccgacgtcgggggcacgccgtcgcggctgacc
aaagtcgcccgcatcgccgacctgctgcgccgggccgcacccaacgccgccctggtcgcg
atcgtcgtgtcgtggctgtccggtgagttgcggcagcgccagatcggggtcggctgggcg
gcgttgcgctcgcgcccgcccgcggccgcacatcccacgctgaccgtcgtcgcggtggac
gccgccttcgccgagatcggcgccgtggcgggcaagggcgcccaggcgcgccgcgcggcc
ctgctgaacgcgttgttcgccgcggccaccgagaccgagcagacgtttctgctgcggctg
ctgggcggcgaactgcgccagggcgcgctggccgggatcatggccgacgccgtcgccagg
gccgccgggataccggccgcggcggtgcagcgcgccgcgatgctgggcggtgacctgccg
gcggtggcggcggccgcgctgtccggggaggcgtccgcgctggacgccttcacgctgcgg
gtgggccggccggtcgcgccgatgctggcccagaccgcggcgggtgtggcccaggcgatc
gaacgccacggcgggcaggcgattttcgaggccaagctggacggggcgcgggtgcagatc
caccgcgccggcgaccaggtcaccgtctacacccgaagcctcgacgacgtcaccgcccga
ctgcccgaggtggtgaccgcgacgctggcgctgccggtcgaggccctgatcgccgacggt
gaggcgatcgcgctgcggccggacaactcaccgcagcgcttccaggtcaccgcctcacgc
ttcggccgctcgctcgatgtcgcagcagccgttgcggcgcaaccactttcggtgttcatc
ttcgacatcctgcactgcgacggcatcgacctgctggacgcgccgaccaccgaccggctg
gccgcgctggacgccctggtgccgcccgcgcagcgggtcgaccggctgctcaccgccgac
cccgacgcggcgggccggttcctggaggcgacgctggccgccgggcacgagggcgtgatg
gccaaggcgccgggcgcgccgtatcaggcgggccggcgcggggcgggctggctcaaggtc
aagccggtgcacacgctggatctagtggtgctcgccgtggagtggggctcggggcggcgc
cgcggcaagctgtccaacatccacctgggcgcccgcgacccggccaccggcgaattcgtc
atggtgggaaagactttcaagggcatgaccgacgcgatgctggactggcagacggcccgg
ttcaccgagctggccgtcggcggcacggacggctacgtggtgcgggtgcgacccgagcag
gtggtcgaggtggcggtggacggtgtgcagaaatcctcgcgctaccccggcgggctggcg
ctgcggttcgcccgggtgctgcgctaccgcgacgacaagggccccgcggaggccgacacc
atcgacgccgtccgggcgctgtactga
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