Mycobacterium avium subsp. paratuberculosis E1: RC58_21570
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Entry
RC58_21570 CDS
T03787
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mavi
Mycobacterium avium subsp. paratuberculosis E1
Brite
KEGG Orthology (KO) [BR:
mavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mavi03021
]
RC58_21570
Transcription machinery [BR:
mavi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RC58_21570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
DUF6456
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AJK77294
UniProt:
A0A7L5MQR3
LinkDB
All DBs
Position
4640386..4640925
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AA seq
179 aa
AA seq
DB search
MAAHNEPVGPRPLRAVPEGGYPDWEAVYADNAAWVYRTLFARVGNRADAEDLTAEVFLAA
LRPLRLTASAAEVRAYLRATARTVLAAHWRETLGREITSIEDIEQPPEHPDAISTAPQRV
ARVLDSLPDRYRRILESRFLQGNSIKEAAAELGISVANAKVLQHRALRLAAQVNEGGRP
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcacacaacgaacccgtcggcccgcgaccgctgcgcgcggtgcccgagggcggc
tacccggactgggaagccgtctacgccgacaacgcggcctgggtgtatcgcacgctgttc
gcccgggtcggcaaccgggccgacgccgaggacctcaccgccgaggtcttcctggccgcg
ttgcggccgctgcggctgaccgccagcgccgccgaggtgcgcgcctacctgcgcgccacc
gcccgcacggtgctggccgcgcactggcgcgagacgctggggcgggagataacctcgatc
gaggacatcgaacaaccgcccgagcaccccgacgcgatcagcaccgccccgcagcgcgtc
gcccgggtgctggacagcctgccggaccgctatcgccgcatcctggaatcgcgcttcctg
caaggtaattcgatcaaggaggcagccgcggaactgggaatcagcgtggccaacgccaag
gtgctgcagcaccgcgcgctgcggctggcggcacaggtcaacgagggaggccggccatga
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