Mycobacterium avium subsp. paratuberculosis E93: RE97_10045
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Entry
RE97_10045 CDS
T03847
Name
(GenBank) RNA polymerase sigma70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mavu03021
]
RE97_10045
Transcription machinery [BR:
mavu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RE97_10045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2275
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
zf-HC2
DUF2304
TraQ
Motif
Other DBs
NCBI-ProteinID:
AJK79480
UniProt:
A0A7U4U185
LinkDB
All DBs
Position
complement(2195759..2197060)
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AA seq
433 aa
AA seq
DB search
MLAQQVDAHLEACRGCRSWLIGAAVQTRRLASVTPGEGPDLVDKIMASIGEQPTGRPAWM
RWLRSHYRRWGLIGVGLFQVAIAAAQISGIDFGMVAGHMHGAMSGEHLMHESTAWLLALG
LAMIAAGVWPASASGVAAITGVYSVALLGYVIVDAFDGEVTATRIASHMPLLLGLAFALL
VARERVGSRRPGSSDATADAGFAAWAADAPAGRRRGHLRPINRAAPDPTASSTTTRRRIG
KPAQLRWLGMIAPSDDEAVTELALSAARGNARALEAFIKATQQDVWRFVAYLCDAGSADD
LPQETFLRAIGAIERFSGRSSARTWLLSIARRVVADHIRHLQSRPRAAVGADPEHVLRTD
RHARGFEDLVEVTTMIASLNPEQREALLLTQLLGLPYADAAAVCGCPVGTIRSRVARARD
ALLADGERSDLTG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcgcagcaggtcgatgcccacctcgaggcgtgccggggctgccgctcctggctg
atcggggcggcggtgcagacccgtcggctggcctcggtgacgccgggcgagggacccgac
ctggtggacaagatcatggccagcatcggcgagcagccgaccgggcgcccggcctggatg
cgctggttgcggtcgcactaccgccgctgggggctgatcggagtcggcctgttccaggtg
gcgatcgccgccgcccagatcagcgggatcgatttcggcatggtcgccggccacatgcac
ggcgccatgtccggcgagcacctgatgcacgagtccacggcgtggttgctggcgctcggg
ctggcgatgatcgccgccggcgtctggcccgcctcggcgtcgggggtggcggcgatcacc
ggcgtgtattcggttgcgctgctgggctatgtcatcgtcgacgccttcgacggggaggtg
accgccacccgcatcgccagccacatgccgctgctgctcggcctggccttcgcgttgctg
gtggcgcgggaacgggtgggatcgcgccggcccggctcctccgacgcgacggcggacgcc
ggctttgcggcctgggccgctgacgctcccgcgggccggcggcgcggacacctgcggccc
atcaatcgcgcggcccccgaccccaccgcatcgtctacgacgacccgtcgtaggatcgga
aaacccgcgcaattaaggtggttgggcatgatcgcgccgagcgacgacgaggcggtaacc
gagctcgcgttgtccgccgcgcgcgggaacgcccgggcgctcgaggcgttcatcaaggcc
acccagcaagacgtgtggcggttcgtcgcgtatctgtgcgatgcgggcagtgccgacgat
ctgccccaggagacgttcctgcgcgcgatcggcgccatcgagcggttctccggacgctcg
agtgcccggacctggctgctgtccatcgcgcgccgcgtcgtggccgaccacatccgtcac
ctgcagtcgcggccgcgcgccgcggtgggcgccgatcccgaacacgtgctgcgcaccgac
cgccacgcccgcggattcgaggatctggtcgaggtgacgacgatgatcgccagcctcaat
cccgaacagcgcgaagcgctgttgctcacccagttgctcgggctgccctacgccgacgcc
gccgcggtgtgcggctgcccggtgggcaccatccgatcgcgggtggcccgggcccgcgac
gcgctgctggccgacggcgagcgcagcgacctgaccggctag
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