Mycobacterium avium subsp. paratuberculosis E93: RE97_21540
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Entry
RE97_21540 CDS
T03847
Name
(GenBank) RNA polymerase sigma factor SigL
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mavu
Mycobacterium avium subsp. paratuberculosis E93
Brite
KEGG Orthology (KO) [BR:
mavu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mavu03021
]
RE97_21540
Transcription machinery [BR:
mavu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RE97_21540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
Terminase_5
HTH_38
GerE
HTH_23
Phage_antitermQ
PaaA_PaaC
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AJK81502
LinkDB
All DBs
Position
4628046..4628591
Genome browser
AA seq
181 aa
AA seq
DB search
MARVVGISRASGTAEAALMKALYDEHAAVLWRYALRLTGDASQSEDVVQETLLRAWQHPE
VIGDTERSARAWLFTVARNMIIDDRRSARFRNVVGSTDTAGAPEQSTPDEVNAALDRLLI
ADAMAQLSAEHRAVIERSYYRGWTTAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVT
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgtgtggtcggcatttccagggcgtccgggactgccgaggccgctctgatgaag
gcgctctacgacgaacacgccgcggtgctgtggcgctacgcgctgcggctgaccggcgac
gcgagccaatccgaggatgtggtgcaggagacgttgctgcgggcctggcagcatcccgag
gtcatcggcgacaccgagcgctcggcccgggcgtggttgttcacggtggcccgcaacatg
atcatcgacgaccggcgcagcgcgcggttccgcaacgtggtcggctcgaccgacaccgcg
ggggcgcccgaacagtccacgcccgacgaggtcaacgcggcgctggaccggttgctgatc
gccgacgcgatggcccagctgtcggccgagcaccgcgccgtgatcgaacggtcctactac
cgcggttggaccaccgcgcagatagctacagacctcggcatcgccgagggaacggtgaag
tcgcgactacactatgcggtgcgggcgttgcgactcactctgcaggaactcggggtcacc
cgatga
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integrated database retrieval system
