Candidatus Methylopumilus turicensis: BN1209_1529
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Entry
BN1209_1529 CDS
T03844
Symbol
ddlB
Name
(GenBank) D-alanine:D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mbac
Candidatus Methylopumilus turicensis
Pathway
mbac00470
D-Amino acid metabolism
mbac00550
Peptidoglycan biosynthesis
mbac01100
Metabolic pathways
mbac01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mbac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN1209_1529 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1209_1529 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BN1209_1529 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mbac01011
]
BN1209_1529 (ddlB)
Enzymes [BR:
mbac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BN1209_1529 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
mbac01011
]
Precursor biosynthesis
Amino acid ligase
BN1209_1529 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
TTL
RimK
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CEN56565
UniProt:
A0A0B7IZN3
LinkDB
All DBs
Position
1:complement(1506266..1507201)
Genome browser
AA seq
311 aa
AA seq
DB search
MMSETFGKVAVLLGGKSGEREVSLKSGSAVLAALQAQGIDAEAFDPATRPLHDLAQYDAA
FISLHGRFGEDGTMQGALELFGIPYTGSGVMASAIGMDKWRTKLIWHAAGVTTPAFEVVS
ADSDFAAIEQKLGLPLFVKPANEGSSIGISKVKTAGGLKAAYELAAKSDPLVIAEQFVGG
GEYTVGILGDQVLPIVRIVPANEFYDFEAKYLRDDTQYLCPCGLPSAQEARIQAEALQAF
KAIGGTGWGRVDFLMDEAGKHYFLEVNTSPGMTDHSLVPMAAKAAGIPFGDLVKRILSLA
IAQHGAKTRVG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgagacatttggaaaagtagccgttttattgggtggaaaatcaggcgaacgt
gaagtttcgctcaagagcggctcggctgtgttagctgcattgcaagcgcaaggcatcgat
gcggaagcatttgatccagcgactcgcccattgcatgacttagcacaatatgacgcggct
tttatttcgctgcatggtcgctttggtgaagatggcaccatgcaaggcgctttggagttg
ttcggcatcccatatacaggctctggcgtgatggcttcagctatcggcatggataagtgg
cgtactaagttaatttggcacgcagcaggtgtaacaacgccggcatttgaagtcgtcagt
gcagattctgattttgcagccattgagcaaaaactgggcttgccactcttcgtcaaaccc
gctaacgaaggctcaagcattggcattagcaaagttaaaacagcagggggtttgaaagcc
gcttatgaattggcagctaaatcagacccgctagtcattgcagagcaatttgtaggcggc
ggcgaatatacagtgggtattttgggcgaccaagttttaccgattgtacgcatcgtgcct
gcgaatgagttttatgattttgaggctaaatatttacgtgatgacacgcagtatttatgc
ccatgtggtttgccatcagcacaagaagccagaatacaagcggaagctttacaggcattt
aaagcgattggtggcacaggttggggtcgtgtggatttcttgatggatgaagcgggcaag
cattactttttggaggtgaataccagtccgggcatgacagatcacagcttggtcccaatg
gccgcaaaagcggcagggattccatttggtgacttagtgaaacgtattttgagtttggca
atagcacagcacggagcgaaaacgcgtgtgggataa
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