Methanosarcina barkeri 3: MSBR3_1234
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Entry
MSBR3_1234 CDS
T04533
Name
(GenBank) Dipeptide transport ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSBR3_1234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbak02000
]
MSBR3_1234
Transporters [BR:
mbak02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSBR3_1234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
AAA_23
nSTAND3
AAA_25
NB-ARC
DEAD
NACHT
DUF87
RsgA_GTPase
Zeta_toxin
Mg_chelatase
PRK
PhoH
TIP49
TrwB_AAD_bind
CbiA
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AKB81812
UniProt:
A0A0E3SL50
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Position
complement(1687268..1688986)
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AA seq
572 aa
AA seq
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MSLLKINDFKCHYLTDVDTVKAVDGISFEIEEGEILGIVGESGSGKTTVALGIMGLLPEN
TDVSGEILYRNEVISSLPEPEMDRFRWKDIAIVFQNGLEVMNPVLKVGVQVTEPMIKHLD
IIPEKAWSKCADLFRTVGLDPKWMDSYPHQLSGGMRQRVLLAMALSCGPKLLVLDEVTSS
LDAFTRKEIRDLLIDLQKNGYTMLVISHDITFVSSVASRIAVMYSGKVIETGPIRDILVL
PLHPYTRGLVHSTPDIFVYKDLWGIPGDVPAGDEFKGCPFSPRCTQRIDICNKTSPVLVP
AGEGREIACHRGGIASLLAAKNLNFSYRLPDGEYLQAVNNVSLEVMEGEVLAIVGQTGSG
KSTLAHILADVIRPERGDVLFMGGNVFGGNYGSRFNGIQIVFQDPFSSTSNRFTVLDAIK
EPLYINKIGSNGDRLQMVKSVLELVRLPSNDNFLRKYCGELSGGQRQRVALARAMVMEPK
LLIADEITSALDVSTSANILRLLKGLQNRRGFAMIYISHDLSLTLKIADRIAVMNSGRII
EIGNSHDVMLSPSDEYTKRLVGSRIGLCCHTH
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcttaaaataaatgattttaaatgccactatttaaccgacgttgatactgtt
aaagctgttgacggcatttcttttgagattgaagaaggagaaattctgggtattgttgga
gaatcaggaagtggcaagaccaccgttgcactcgggatcatggggcttttgccggaaaat
acagatgtttccggtgagattctttacaggaatgaggtaatctcttctttgcctgaacct
gaaatggacagattcagatggaaggatattgcaatagtttttcagaatggcctggaggtt
atgaatcctgttctgaaagtaggcgttcaggtaacggaaccaatgataaagcaccttgat
atcatccccgaaaaagcatggagtaaatgtgctgatctattcaggactgtcggccttgac
cctaaatggatggattcatatccgcatcagctttccggaggtatgaggcagagggttctt
ctggcaatggctctgtcatgtggccctaaactactggttctcgatgaagttacttcttca
cttgatgcatttacccgtaaggaaatcagggaccttcttatcgatcttcagaagaatggg
tatacgatgttagtgatctctcatgatatcactttcgtgtcttctgttgcttccagaatt
gctgttatgtattcaggaaaggttattgaaacaggacctataagggatattctcgtactt
ccccttcatccttatacaaggggtcttgtccattcgactccggatattttcgtttataaa
gatttgtggggaattccaggtgatgtacctgcaggagatgaatttaagggctgtcctttt
agcccgagatgtacacagagaatcgatatatgcaataaaacttccccggttctggtacct
gcaggagaggggcgagaaattgcatgccatagaggtggcatagcaagtcttcttgcggct
aaaaatctgaatttcagctatcgtctgccagatggagaatatcttcaggcagttaataat
gttagcctggaagtgatggaaggagaggttcttgcaattgtcggacagaccggttcgggt
aagtcaacccttgcgcatatccttgcagatgtaataaggcctgaacgcggagatgtattg
tttatgggtgggaatgttttcggtggaaactatggaagcagattcaatggcattcagata
gtattccaggacccgttcagttcaaccagcaacaggtttactgtgcttgatgcaatcaaa
gagcctctttatatcaataagatcgggtcaaacggagatagactgcaaatggttaaaagt
gtccttgaacttgttcgtcttcccagtaatgataattttcttcgcaagtattgcggtgaa
ctcagcggcggtcaaaggcagagggttgcacttgcaagggcaatggttatggagccaaaa
ctccttattgccgatgagataacttcggctctggatgtttcaacatctgcaaatatattg
cgtcttttaaagggccttcagaacaggagaggatttgcaatgatatatatttcacacgat
ctctcccttacactgaagattgctgacaggatagcggttatgaattccggaaggattata
gagataggaaattctcatgatgtgatgctttcaccttctgatgagtatacaaaaaggctt
gtgggttcgagaataggattgtgctgtcatactcattaa
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