Methanosarcina barkeri 3: MSBR3_2349
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Entry
MSBR3_2349 CDS
T04533
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mbak
Methanosarcina barkeri 3
Pathway
mbak00630
Glyoxylate and dicarboxylate metabolism
mbak01100
Metabolic pathways
mbak01110
Biosynthesis of secondary metabolites
mbak01120
Microbial metabolism in diverse environments
mbak01200
Carbon metabolism
Module
mbak_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mbak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSBR3_2349
Enzymes [BR:
mbak01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSBR3_2349
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB82927
UniProt:
A0A0E3SN11
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Position
complement(3110957..3112243)
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AA seq
428 aa
AA seq
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MRRDYIDTGYSPKDTDLICEFHIEPSAGVNFEEAATHMAGESSIDSWTEISTLSPELAAR
LKPHVFYVNEDAQTVRVAYSEELFELGSVPQVLSAVAGNILSMKVVDNLRLQDIAFPGSM
LHEFKGPKFGLPGIRELTGVQDRPLIGTIVKPKVGLTSEKHAEVAYKSFAGGCDLVKDDE
NLTDQKFNGFEKRAELTLKLAEKAESETGERKMYLCNITAPTCKEMIRRMNILKDLGASY
AMIDIVPAGWTALQTLREEADDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDNVPADENQHILAQNWGRLKPMFPVASGGLAPT
MIPDLYTIFGKDVIMQFGGGIHAHPMGTAAGATACRQALEATLEGVSLQEYAKSHRELEV
AIDKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagggattatatagacacgggctacagcccaaaggataccgatcttatatgtgag
ttccacatcgaaccgtcagcaggagtgaattttgaggaagctgcaactcatatggcaggt
gaaagctctatagactcctggactgaaatttcaacgctaagtcccgaacttgcagccagg
ttaaagccccatgtcttttacgtgaatgaagatgcgcagactgtaagggtagcttattcg
gaagagctctttgaactcgggtcggtcccgcaggtactcagtgcggtcgcgggaaatatc
ctgagtatgaaagtagttgacaatcttaggctgcaggatattgctttccctggttcgatg
cttcatgaatttaaaggacctaagttcggattgccaggaataagggaacttacaggagtt
caggacaggcctctcataggaactattgtcaagccgaaagttggattaacctccgaaaaa
cacgctgaggttgcttacaaatcctttgcaggaggttgcgaccttgtgaaagacgatgag
aaccttacggatcagaagtttaatggctttgaaaaaagagctgaacttacactgaagctt
gcagaaaaggcagaatctgagacaggagagcgtaaaatgtatctctgcaacattactgcc
cctacctgtaaggaaatgatccgccgcatgaatatccttaaagacctgggtgccagctat
gcgatgattgacatcgtacctgcaggctggactgcgcttcagaccctgagggaagaagca
gacgatgcgggacttgctctccatgctcaccgatgcatgcattcagcctatactcggaat
ccacgccacggtataagcatgcttgtggttgccaagctctgcaggttgatcgggcttgac
cagcttcacataggtacggttgtaggaaaaatgcacggagaaaaacacgaggttctatct
cttcgtgacgaatgtgtgctagacaatgtgcctgcggatgaaaaccagcatattcttgcc
cagaactggggaagattgaaacccatgttccctgttgcatctggagggcttgctcctact
atgattcctgacctgtacaccatcttcgggaaggatgttattatgcagtttggtggcgga
attcacgcccatccaatgggcacggcagccggggccactgcttgcaggcaggcacttgaa
gcaactcttgaaggagttagcctgcaagaatatgcgaaaagccacagagaacttgaggtt
gccatcgataaatggctgaaaaaataa
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