Methanosarcina barkeri 227: MSBR2_3441
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Entry
MSBR2_3441 CDS
T03914
Name
(GenBank) Archaeal DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
mbar
Methanosarcina barkeri 227
Pathway
mbar03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSBR2_3441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbar03032
]
MSBR2_3441
Enzymes [BR:
mbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSBR2_3441
DNA replication proteins [BR:
mbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
MSBR2_3441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
tRNA_anti-codon
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AKB59957
UniProt:
A0A0E3R882
LinkDB
All DBs
Position
complement(4412860..4414959)
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AA seq
699 aa
AA seq
DB search
MERKDIIRVVMEKEYQISPEAVELIYSSDSSEDLLKYVLLTVNDSVIVIGVEDIDLEGFA
AFSAGESPLDKIHASSTEERKILSGASMLSSRSGNPSSKPDSFLVPDPLSESVLSSEPDA
ITAAPDPSIKSSQDSVPDSSVQDMVLDKAYEPAPDTPDTPDASNTPDTPDASNTPDTPDA
SNTPDASNIPDASNTPDTLDIQSENILSDETSASNLVSDSISSVKAPPQTFSSRSSLDVN
RSVSSFFGQDNSLSSFPSNRSFRTEPSSSEREIFLDSRDEYKHYPGKNPVTVVSDITGHS
TCVGEYMQFVQYFRDRYSRLSEIIRGRINARPIESLKRRNFRRGGDGGSEEISIIGMVSD
ISSTTNGHKILSLEDPTGSFSVLIRNSDKELFELASKILLDEVIGVTGSITNDGSLMLAT
KLIQPDVPNSVQRRTGTHGKAVLISDVHVGSSQFMEDAWLDFLDFLKGESDSEDMRELAA
SVRYLVVAGDIVDGIGIYPDQELELDILDVYEQYRKAAEYFREIPERIRVIISPGNHDAV
RQAEPQPALPESIQAYFPESIVFVGNPAFLELDGVRLLIYHGRSIDDLVATVPGVSYQEP
AGAVLEMLKRRHLAPTYGSRVSISPEKKDYFIIDPVPDIIHTGHVHTLGVQRYKNVLLVN
SGTWQGQTEFQKRVNLVPVPARVPIVDLENFDVKILAFD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaggatattataagggttgttatggaaaaagagtatcaaatcagccctgaa
gccgtggaacttatttattccagtgactcttccgaagacctgcttaaatatgtcctttta
actgtaaatgactctgttattgtcataggtgtcgaagacatagatcttgaaggctttgcc
gctttttcagcaggtgagtcgcctttagataaaatacatgcctcttctacagaggaaagg
aaaattctttccggggcttcaatgctttcttccagatcaggcaacccatcttccaaacct
gattcctttttagtgcccgatcctctttcagaatctgttctttcctcagagcccgatgct
attactgcagctcctgacccaagtataaaatcatctcaagactctgttcctgattcttca
gttcaggatatggttctggataaggcttatgaaccagctccagatactccagatactcca
gatgcttcaaatactccagatactccagatgcttcaaatactccagatactccagatgct
tcaaatactccagatgcttcaaatattccagatgcttcaaatactccagatactctggat
atacaatcagaaaatattttatctgacgaaacttcggcttccaatcttgtttcagactcc
atttcttcggtgaaggcaccccctcaaactttctcttctcgttcctccctggatgtaaac
aggtcagtctcttcttttttcgggcaggataactctctttcctcatttccttcaaatagg
agtttcaggacagaaccatcttcttctgagagagagatatttttggattccagggatgag
tacaaacattacccgggcaaaaatcctgtgactgtagtttcggatataacagggcactcc
acctgtgtcggggaatatatgcaatttgtgcagtatttcagggatagatacagtaggctt
tcggagattatccggggcagaatcaacgcacgccctatcgaaagcttaaaaagaagaaac
ttccgcagaggaggagatggaggctctgaggaaatctcgattataggtatggtttcggat
atcagcagcacaactaacggtcataaaatcctttctctggaggacccaacaggttctttt
tcagtccttattcgtaactccgataaagagctttttgaacttgcatcaaaaattctcctg
gatgaagtcataggggtaactggttcgataaccaatgatgggagcctcatgctggcaaca
aagctaatacaacccgatgtcccaaatagtgtccagcgcagaaccggaacccatgggaaa
gctgtattgatttcggatgtccacgtgggcagctcccagtttatggaagatgcctggctg
gatttcctggattttttgaaaggggaatcggattcagaggatatgcgggaacttgcagcc
agtgttcgttatcttgttgtcgcaggagatattgttgatgggataggaatctatcctgac
caggaattagaacttgatattctggatgtctacgaacagtacagaaaagctgcagaatat
ttccgggaaattcccgagcgtattcgtgtaatcataagtcctggcaatcacgatgctgtt
cgccaggcagaaccccaacccgctctgccggaaagtatccaggcgtattttcctgagagt
attgtttttgttggtaaccctgcttttctggaacttgatggtgtccgccttcttatctac
cacggcaggtcgattgacgatcttgtggcgactgttccaggagtctcgtatcaggaacct
gcgggggcagtccttgagatgttgaaacgcagacatcttgctccgacctatgggagtaga
gtttccatatcccctgagaaaaaagactattttataatcgatcctgtgcccgatatcatt
catacaggccacgtccataccctgggagtccaacgctataagaacgtccttctggtcaat
tccggaacatggcagggccaaacagagttccagaagcgtgtaaatctagtacctgtccct
gctagggttccgattgtggatctcgagaattttgacgtaaagattcttgcttttgactga
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