Candidatus Methylopumilus planktonicus: BN1208_0873
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Entry
BN1208_0873 CDS
T03869
Symbol
recR
Name
(GenBank) gap repair protein
KO
K06187
recombination protein RecR
Organism
mbat
Candidatus Methylopumilus planktonicus
Pathway
mbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN1208_0873 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbat03400
]
BN1208_0873 (recR)
DNA repair and recombination proteins [BR:
mbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN1208_0873 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN1208_0873 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecR_HhH
Toprim_4
RecR_C
Toprim
RecR_ZnF
Motif
Other DBs
NCBI-ProteinID:
CEZ19758
UniProt:
A0A0D6EWV5
LinkDB
All DBs
Position
1:820580..821182
Genome browser
AA seq
200 aa
AA seq
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MKNTEALEQLVDALRCLPGIGPKSALRMAYHLLQHNRKGASQLSSAIANAIELVGHCSYC
NNFSEEVVCSLCSSKDRDASILCVIEMPSDLMMLEQTHSYNGMYFILMGKLSPLDGIGPK
DIHLDRLLKRLDAGIVKEVILANNFTVGGDATAHYVTELLKARGIRLSRIARGLPMGGEI
EYVDSGTLAQAMIERKIIKD
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatactgaagcactcgaacagttagttgatgccctaaggtgcttaccaggtatt
ggtcctaaatcggccttacgcatggcttaccatcttcttcagcacaacagaaaaggtgcc
tcacaactctcaagcgctattgctaacgcaatcgaattggtgggtcactgctcttattgc
aataacttttctgaagaagtggtttgctcactttgttcatccaaagatcgagatgcctca
attctttgtgtgatcgaaatgccaagtgatctcatgatgctagaacaaacgcactcttat
aacggcatgtattttattttaatgggtaaactctcacctttagatggtattggtccaaaa
gatattcatttagataggcttttaaaacgtctcgatgctggaatcgttaaagaagtgatc
ttagcgaataattttacggtgggcggagatgctactgctcattatgtcactgaactcctt
aaagcacgcggcattcgattaagtcgaatagcaagaggtttacctatgggtggtgaaatt
gaatatgtagatagcgggacacttgcccaagctatgattgaacgtaaaataattaaagat
tga
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