Melittangium boletus: MEBOL_004870
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Entry
MEBOL_004870 CDS
T05066
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mbd
Melittangium boletus
Brite
KEGG Orthology (KO) [BR:
mbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MEBOL_004870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbd03400
]
MEBOL_004870
Enzymes [BR:
mbd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MEBOL_004870
DNA repair and recombination proteins [BR:
mbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MEBOL_004870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ATB31407
UniProt:
A0A250IJS0
LinkDB
All DBs
Position
5857250..5859766
Genome browser
AA seq
838 aa
AA seq
DB search
MGTYREKRDFSRTSEPSPEVSAPAGGGVFVVHKHDATRLHYDLRLEIDGVLVSWAIPKGP
SHDPADKRLAVQTEDHPLAYATFEGRISEGNYGAGDSLLWESGTFDTVPPGEASAQLARG
RLHVALHGQKLEGEWHLIRTRPVGKKAQWLCIKAKDGTERPGYDVTVERPESVKSGQRVT
RGPKRRTASKAKAKATPRLRSPQALLARVGTPMLATLAQVEATDAADWRFEVKYDGFRAL
AAVHGGRVALHSRGGHDLSERFPAIAQALEALGKHEVVLDGELVALDAQGRSRFQLLGKG
AEERFVVFDVPWLDGEDLSPLPLEERRKKLEGLLARVKPPLALAERVEGTARQALSQARR
RGWEGVMAKRVGSVYAPGRGEAWLKLKVQANQEVAIVGFTPMANERPEIGALLVAVREDG
AWRYAGKVGTGYSTQVRRDLLKLLSRDEVKKPLVKEAPRVRDALRHEEAVWVKPRHVAQV
AFTEWTEDGRLRHPSFQGLRNDKRPEECVRERPRETPVRRGPSARGPHRETGRKARPGKR
AAGRTATARKGAAGEPVVLTHGERVLFPAVGLTKADVFAWFQDVAPLMVPALAGRPLTLQ
QWPQGIQAPGFFRQGVESAPDWLTVTRIRHEARLLSHVVVDRPESLLWLANQSALTLHMW
SSRVPHLKQPDWVVFDLDPGPKGTFEELIELTLGLRRLLERLGLASVPKTSGKRGLHVLV
PLAPGHTYARTRAFALQVFEALAQEYPELATTEHAKTRREGRLYLDAGQNAWGKTVVAPY
SLRALPHAPVSTPLKWSEVTRRLDPTRFTLETLRRRLDKVGDLFAPALEGGQTLPSSS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
ttgggcacctaccgcgagaagcgtgacttctcgcggacctccgagccctctccagaggtt
tccgcgcccgccggtgggggcgtcttcgtggtgcacaagcacgacgccacgcggctgcac
tacgacctgcggctggagatcgacggggtgctcgtcagttgggccattcccaagggcccg
agccatgacccggcggacaagcggctcgcggtccagaccgaggaccaccccctggcctat
gccaccttcgagggccgcatctccgaggggaactacggagcgggggattcgctgctgtgg
gagtcgggcaccttcgacaccgtgcctccgggtgaggcctcggcgcagctcgcgcggggc
cggctgcacgtggcgctgcatggccagaagctcgagggcgagtggcacctcatccgcacg
cgtccggtgggcaagaaggcgcagtggttgtgcatcaaggccaaggatggcaccgagcgc
cctggctatgacgtcaccgtcgagcgtcccgagtccgtgaagtccggccagcgtgtcacc
cgcgggcccaagcgccggaccgcgtccaaggccaaggccaaggccacgcccaggctccgc
tcgccccaggccctcctggcgcgggtgggcacgcccatgctggccacgctcgcccaggtg
gaggccacggacgcggcggactggcgtttcgaggtgaagtacgacggcttccgcgcgctc
gcggcggtccacggcggacgggtggccctgcactcgcgcggaggccatgacctgtccgag
cgctttcccgccatcgcccaggccctcgaggcgctggggaaacacgaggtggtgctggac
ggggaactcgtggccctggatgcccagggccgttcgcgcttccaactgctcggcaagggc
gccgaggagcgcttcgtggtgttcgatgtcccgtggctcgacggggaggacctgagcccg
ctgccgctggaggagcgccggaagaagctcgaggggctgctggcgcgggtgaagccaccg
ctcgcgctcgccgagcgggtggaggggaccgcgcggcaggcgctctcccaggcgcggcgg
cgagggtgggagggcgtcatggccaagcgcgtgggctccgtctacgcgccgggccggggc
gaggcatggctcaagctcaaggtccaggccaaccaggaggtggccatcgtgggcttcacg
cccatggccaacgagcggccggagattggcgcgctcctggtggcggtgcgtgaggacggg
gcctggcgttacgcgggcaaggtggggacgggttactccacgcaggtgcggcgcgatctg
ttgaagctcctgtcgcgcgacgaggtgaagaagcccctggtgaaggaagcgccgcgggtc
cgtgacgccttgcgccacgaggaggccgtctgggtgaagccccgccacgtggcccaggtg
gccttcaccgagtggaccgaggacggacgcctgcgccatccctccttccaggggctgcga
aacgacaagcgccccgaggagtgtgtgcgcgagcggccgcgcgagacgcccgtgcgccgg
ggcccctccgcgcgagggccgcaccgggagacgggacgcaaggcgcgtccggggaagcgg
gccgcgggacggaccgccaccgcccggaagggcgccgccggggagccggtcgtgctcacc
catggggagcgggtgctgtttcccgcggtgggactcaccaaggcggacgtgttcgcgtgg
ttccaggacgtggcgcccctgatggtgccggcgctcgcgggccggccgctcacgttgcag
cagtggccccaggggatccaggcgcccggcttcttccgccagggggtggagagcgcgccg
gactggctcaccgtcacgcgcatccggcacgaggcgcggctcttgtcccacgtggtggtg
gacaggcccgagtcgctgctgtggctcgccaaccagtccgcgctcaccctgcacatgtgg
tcgagccgggtgccgcacctcaagcagcccgactgggtggtgttcgatctggatcccggt
cccaaggggaccttcgaggagctgatcgagctgacgctgggcctgcggcgtctgttggag
cggctcggcctggcgagcgtgcccaagacgtccggcaagcggggcctgcacgtgttggtg
cccctggcgccgggccatacctacgcgcggacaagggcgttcgcactccaggtgttcgaa
gcgctcgcccaggaatacccggagttggccaccaccgagcacgccaagacgcggcgtgaa
gggcggctgtacctggacgcgggccagaacgcctggggcaagacggtggtggcgccctac
tcactccgggcgctgccgcacgcgcccgtgtccacgccgctcaagtggtcggaggtgacg
cgccggttggaccccacacggttcaccctcgagaccctgcggcggcgcctggacaaggta
ggcgacctgttcgcccccgccctggagggagggcagacgctcccgtcttcctcttga
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