Drepanopeziza brunnea: MBM_00208
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Entry
MBM_00208 CDS
T03105
Name
(RefSeq) putative Glucose-repressible alcohol dehydrogenase transcriptional effector
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBM_00208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_00208
Enzymes [BR:
mbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
MBM_00208
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MBM_00208
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MBM_00208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
DUF2218
Motif
Other DBs
NCBI-GeneID:
18756143
NCBI-ProteinID:
XP_007288097
UniProt:
K1WTY3
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MADAYRFSQQSAGSYYFPQQTQQHLPRQQIIRNTTPPSSIRPVYNADTPSPSRSPDPHSP
APNIYAMFNQSHQQGQHGRVNGGPGRGNMPIMFNNFQHQNSPHHPHNAHNTHTTLQQDHN
THSTNGGIIGHHATYSSGVLSNATPSFTPNSLTNGHSGTTRGGQAVQISEHWARQLEMHK
ESEKAHVHMADGHSHHYARMKAGENKGLALVAPPDPDTQDSDEKDLSRMSTQSTKRQDWF
NLDFSGQGIKVLAEPIFQYQFLKKLYVASNKLTRLPSSIRHLRSLQHLDASNNLLTELPP
ELGMCVFLENLLVFDNSIQTLPNELGSLFHLEMLGIEGNPLAPELKQEIMERGTKSLITL
LQNQAPPPMPPNSRDKIELQEGEPNPNQETFKVYSFNILSDQACTRKMYGYSPAEALEWS
YRKESILTDIQSNDADFVCLQEVDTDTYESFFRMQLAYNDYKGAFWARTRSKTMAEKEAV
KVDGCATFWKNSKYILLDKQLIDFANIAINRPDMKSHHDIFNRVMPRDHIGVVTFFENRQ
TGSRLILVNTHIFWDPAYADVKLIQTAILIGEVNKLAEKYAKWPACKDKKAFGLANEDAD
QDTSPEPTPQPSREYTSKTQIPLVICADQNSTPDSSVFELLAKGSVRAKHPELGGRSYGN
FSKDGIEHPFSLRSAYTNLDKTPDAVPFTNYVPTFKGVIDHIWYSTNALENISLLGQVDP
EYMKAVPGFPNYHFPSDHLSLMAEFAVKGAKGKKVITEPDFGPSSRSNDRRRN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcttacagattctcacagcagagcgctgggagttactacttcccacaacag
acgcaacagcatcttccgagacaacagatcattcgcaataccactccgccaagcagcatt
agacctgtctacaacgccgatactccctccccatctcgatcgcctgaccctcactcgccc
gcgccaaatatctacgcgatgttcaaccagagtcaccagcaagggcagcatggccgcgtc
aatggagggcctgggcgagggaatatgccaataatgttcaacaacttccagcatcaaaac
tccccacaccatcctcacaatgcccataacacccatacgactctccagcaagaccataat
acgcactcgaccaatggagggattatcggtcatcatgccacttactcatcgggggtattg
tcaaatgcaacgccgagcttcaccccaaactccctcacaaatgggcactcggggacgaca
cgtggtgggcaagcagtccaaatctctgaacactgggcaaggcagctagagatgcacaag
gagtctgagaaggcacatgttcacatggcggatgggcactctcaccactacgctaggatg
aaggctggagagaacaagggacttgccttggttgctccaccagatccagacacacaagat
agcgacgagaaggatctgagccgtatgtcgactcagtccactaaacgccaggattggttc
aatctggattttagtggccagggtatcaaagtactcgctgaaccgatcttccagtaccaa
tttctgaagaaactatatgtggcttctaataagctgacgaggcttccctcctccattcgg
cacctacggtcactacagcacttggatgcctctaataacctcctgaccgaattgcctccg
gaattgggcatgtgtgtatttttagagaatctcctggtgttcgataactcgatacagacg
ttgccaaacgagcttggatccttgttccatcttgaaatgctcggtatcgaaggcaatccg
cttgcgccagagttgaagcaggaaatcatggaaaggggtaccaaatccctaatcacactg
ctccaaaatcaagctcctcctcctatgcctccgaacagccgtgacaagatcgaacttcaa
gaaggcgaaccgaaccccaatcaagagaccttcaaagtctattcctttaacattctttcg
gaccaggcgtgcactcgaaagatgtacggttacagccctgcagaagctttggagtggagc
tatcgaaaggagtccattctcacggatatccagagcaatgacgcggatttcgtgtgctta
caagaagttgatacggatacttacgagtcgttcttcagaatgcagcttgcttacaatgac
tacaaaggtgctttctgggcgcggactcgctcgaagaccatggccgaaaaagaagcggta
aaggttgatggatgcgcaacattctggaagaatagcaagtacatactgcttgataagcag
cttatcgatttcgcgaacattgccatcaatcgaccagatatgaaaagccaccacgatatt
ttcaaccgggtcatgccgagggatcacattggagtggtcacgttcttcgaaaataggcaa
acaggatcccgattgattcttgtcaatacccacatattctgggatcccgcttacgcagac
gtcaagctgatccaaaccgctatcttgatcggagaagtcaacaaattagccgaaaaatat
gcgaagtggcccgcgtgcaaagacaagaaggcatttggcttagccaatgaagatgcggac
caggatacatccccagagcctacgcctcaaccatcaagggagtacacgagcaagactcag
ataccacttgtgatctgcgccgaccaaaactcgactcctgattcgagcgtttttgagttg
ctggctaagggatccgtcagagccaagcatcccgagcttgggggccgcagttacggcaat
ttctccaaagacggaatagaacatccattctccttgcgttcggcatacaccaaccttgac
aagactccagatgcagttccgtttaccaattatgtacctacattcaagggtgtcatcgat
catatttggtattcaacgaacgctctggaaaacatctcgctcctgggccaggttgacccc
gagtacatgaaggcagttcctggattccccaactaccacttcccgagtgaccacctgtca
ctcatggcggagtttgcagtcaagggcgccaaggggaagaaagttatcacggagcctgat
tttggcccttcgagtaggagtaacgatcgaaggaggaactag
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